RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 NECAB3Q96P71 396 aaPredicted RBP15.4■□□□□ 0.06
PTPN7-207ENST00000468385 SLC9A7Q96T83 725 aa15.4■□□□□ 0.06
PTPN7-207ENST00000468385 CERS4Q9HA82 394 aa15.4■□□□□ 0.06
PTPN7-207ENST00000468385 WDR19Q8NEZ3 1342 aa15.4■□□□□ 0.06
PTPN7-207ENST00000468385 ARHGEF15O94989 841 aa15.39■□□□□ 0.05
PTPN7-207ENST00000468385 ARIH2O95376 493 aa15.39■□□□□ 0.05
PTPN7-207ENST00000468385 SNHG28P0DPA3 235 aa15.39■□□□□ 0.05
PTPN7-207ENST00000468385 PTPN11Q06124 597 aaPredicted RBP15.39■□□□□ 0.05
PTPN7-207ENST00000468385 ZNF543Q08ER8 600 aa15.39■□□□□ 0.05
PTPN7-207ENST00000468385 BRDTQ58F21 947 aaPredicted RBP15.39■□□□□ 0.05
PTPN7-207ENST00000468385 DNERQ8NFT8 737 aa15.39■□□□□ 0.05
PTPN7-207ENST00000468385 PHOSPHO2Q8TCD6 241 aa15.39■□□□□ 0.05
PTPN7-207ENST00000468385 SCFD2Q8WU76 684 aa15.39■□□□□ 0.05
PTPN7-207ENST00000468385 FAM227BQ96M60 508 aa15.39■□□□□ 0.05
PTPN7-207ENST00000468385 PNMA2Q9UL42 364 aa15.39■□□□□ 0.05
PTPN7-207ENST00000468385 RAD50Q92878 1312 aa15.39■□□□□ 0.05
PTPN7-207ENST00000468385 TANC1Q9C0D5 1861 aa15.38■□□□□ 0.05
PTPN7-207ENST00000468385 A0A0D9SFI3 127 aa15.38■□□□□ 0.05
PTPN7-207ENST00000468385 KPNA6O60684 536 aa15.38■□□□□ 0.05
PTPN7-207ENST00000468385 HSPD1P10809 573 aaKnown RBP15.38■□□□□ 0.05
PTPN7-207ENST00000468385 KCNQ1P51787 676 aa15.38■□□□□ 0.05
PTPN7-207ENST00000468385 TAP1Q03518 808 aa15.38■□□□□ 0.05
PTPN7-207ENST00000468385 RETREG2Q8NC44 543 aa15.38■□□□□ 0.05
PTPN7-207ENST00000468385 MPHOSPH6Q99547 160 aaKnown RBP15.38■□□□□ 0.05
PTPN7-207ENST00000468385 ZMYM6O95789 1325 aa15.38■□□□□ 0.05
PTPN7-207ENST00000468385 TCF20Q9UGU0 1960 aaKnown RBP15.37■□□□□ 0.05
PTPN7-207ENST00000468385 GTPBP6O43824 516 aaPredicted RBP15.37■□□□□ 0.05
PTPN7-207ENST00000468385 TXNP10599 105 aaKnown RBP15.37■□□□□ 0.05
PTPN7-207ENST00000468385 HAND2P61296 217 aa15.37■□□□□ 0.05
PTPN7-207ENST00000468385 BFSP2Q13515 415 aa15.37■□□□□ 0.05
PTPN7-207ENST00000468385 SKIV2LQ15477 1246 aaKnown RBP15.37■□□□□ 0.05
PTPN7-207ENST00000468385 MCMDC2Q4G0Z9 681 aa15.37■□□□□ 0.05
PTPN7-207ENST00000468385 KRT40Q6A162 431 aa15.37■□□□□ 0.05
PTPN7-207ENST00000468385 ZNF589Q86UQ0 364 aaPredicted RBP15.37■□□□□ 0.05
PTPN7-207ENST00000468385 HERC6Q8IVU3 1022 aa15.37■□□□□ 0.05
PTPN7-207ENST00000468385 TTC14Q96N46 770 aa15.37■□□□□ 0.05
PTPN7-207ENST00000468385 PDE1AP54750 535 aa15.36■□□□□ 0.05
PTPN7-207ENST00000468385 GPNMBQ14956 572 aa15.36■□□□□ 0.05
PTPN7-207ENST00000468385 AAK1Q2M2I8 961 aa15.36■□□□□ 0.05
PTPN7-207ENST00000468385 ANKRD45Q5TZF3 282 aa15.36■□□□□ 0.05
PTPN7-207ENST00000468385 CCDC62Q6P9F0 684 aa15.36■□□□□ 0.05
PTPN7-207ENST00000468385 RGS22Q8NE09 1264 aa15.36■□□□□ 0.05
PTPN7-207ENST00000468385 ARNTL2Q8WYA1 636 aa15.36■□□□□ 0.05
PTPN7-207ENST00000468385 CTAGE1Q96RT6 745 aa15.36■□□□□ 0.05
PTPN7-207ENST00000468385 FTOQ9C0B1 505 aaKnown RBP eCLIP15.36■□□□□ 0.05
PTPN7-207ENST00000468385 TRANK1O15050 2925 aa15.35■□□□□ 0.05
PTPN7-207ENST00000468385 PRRC2BQ5JSZ5 2229 aaKnown RBP15.35■□□□□ 0.05
PTPN7-207ENST00000468385 B4DLN1 442 aa15.35■□□□□ 0.05
PTPN7-207ENST00000468385 KIF28PB7ZC32 967 aa15.35■□□□□ 0.05
PTPN7-207ENST00000468385 BAIAP3O94812 1187 aa15.35■□□□□ 0.05
PTPN7-207ENST00000468385 MRPL12P52815 198 aaKnown RBP15.35■□□□□ 0.05
PTPN7-207ENST00000468385 NMIQ13287 307 aaPredicted RBP15.35■□□□□ 0.05
PTPN7-207ENST00000468385 PTGISQ16647 500 aa15.35■□□□□ 0.05
PTPN7-207ENST00000468385 USH1GQ495M9 461 aa15.35■□□□□ 0.05
PTPN7-207ENST00000468385 SPRED2Q7Z698 418 aa15.35■□□□□ 0.05
PTPN7-207ENST00000468385 TBC1D10CQ8IV04 446 aa15.35■□□□□ 0.05
PTPN7-207ENST00000468385 AFG1LQ8WV93 481 aa15.35■□□□□ 0.05
PTPN7-207ENST00000468385 TBC1D5Q92609 795 aa15.35■□□□□ 0.05
PTPN7-207ENST00000468385 CPVLQ9H3G5 476 aa15.35■□□□□ 0.05
PTPN7-207ENST00000468385 NOD1Q9Y239 953 aa15.35■□□□□ 0.05
PTPN7-207ENST00000468385 TET1Q8NFU7 2136 aa15.35■□□□□ 0.05
PTPN7-207ENST00000468385 LPXNO60711 386 aa15.34■□□□□ 0.05
PTPN7-207ENST00000468385 MMP3P08254 477 aa15.34■□□□□ 0.05
PTPN7-207ENST00000468385 GOLGA8HP0CJ92 632 aa15.34■□□□□ 0.05
PTPN7-207ENST00000468385 PCP11498 1178 aaKnown RBP15.34■□□□□ 0.05
PTPN7-207ENST00000468385 ARHGAP1Q07960 439 aa15.34■□□□□ 0.05
PTPN7-207ENST00000468385 GRB10Q13322 594 aa15.34■□□□□ 0.05
PTPN7-207ENST00000468385 LY6KQ17RY6 165 aa15.34■□□□□ 0.05
PTPN7-207ENST00000468385 GPATCH4Q5T3I0 446 aaKnown RBP15.34■□□□□ 0.05
PTPN7-207ENST00000468385 GDF6Q6KF10 455 aaPredicted RBP15.34■□□□□ 0.05
PTPN7-207ENST00000468385 MFSD6Q6ZSS7 791 aa15.34■□□□□ 0.05
PTPN7-207ENST00000468385 SESTD1Q86VW0 696 aa15.34■□□□□ 0.05
PTPN7-207ENST00000468385 TICAM2Q86XR7 235 aa15.34■□□□□ 0.05
PTPN7-207ENST00000468385 CAGE1Q8TC20 777 aa15.34■□□□□ 0.05
PTPN7-207ENST00000468385 AFAP1L1Q8TED9 768 aa15.34■□□□□ 0.05
PTPN7-207ENST00000468385 KAT2BQ92831 832 aa15.34■□□□□ 0.05
PTPN7-207ENST00000468385 UBA5Q9GZZ9 404 aa15.34■□□□□ 0.05
PTPN7-207ENST00000468385 COL20A1Q9P218 1284 aa15.34■□□□□ 0.05
PTPN7-207ENST00000468385 COG5Q9UP83 839 aa15.34■□□□□ 0.05
PTPN7-207ENST00000468385 PTPRSQ13332 1948 aa15.34■□□□□ 0.05
PTPN7-207ENST00000468385 LCHNA4D1U4 455 aa15.33■□□□□ 0.04
PTPN7-207ENST00000468385 TLL1O43897 1013 aa15.33■□□□□ 0.04
PTPN7-207ENST00000468385 CHMP4BP1P59074 171 aa15.33■□□□□ 0.04
PTPN7-207ENST00000468385 WDR5P61964 334 aaKnown RBP15.33■□□□□ 0.04
PTPN7-207ENST00000468385 SEPT14Q6ZU15 432 aa15.33■□□□□ 0.04
PTPN7-207ENST00000468385 SYTL5Q8TDW5 730 aaPredicted RBP15.33■□□□□ 0.04
PTPN7-207ENST00000468385 DHX38Q92620 1227 aaKnown RBP15.33■□□□□ 0.04
PTPN7-207ENST00000468385 TAAR1Q96RJ0 339 aa15.33■□□□□ 0.04
PTPN7-207ENST00000468385 ZKSCAN3Q9BRR0 538 aa15.33■□□□□ 0.04
PTPN7-207ENST00000468385 C1QTNF1Q9BXJ1 281 aa15.33■□□□□ 0.04
PTPN7-207ENST00000468385 MAF1Q9H063 256 aa15.33■□□□□ 0.04
PTPN7-207ENST00000468385 ZBTB47Q9UFB7 747 aaPredicted RBP15.33■□□□□ 0.04
PTPN7-207ENST00000468385 NEDD4P46934 1319 aa15.33■□□□□ 0.04
PTPN7-207ENST00000468385 CCDC171Q6TFL3 1326 aa15.33■□□□□ 0.04
PTPN7-207ENST00000468385 NCOR1O75376 2440 aa15.32■□□□□ 0.04
PTPN7-207ENST00000468385 GH1P01241 217 aa15.32■□□□□ 0.04
PTPN7-207ENST00000468385 SELPP16109 830 aa15.32■□□□□ 0.04
PTPN7-207ENST00000468385 PLA2G5P39877 138 aa15.32■□□□□ 0.04
PTPN7-207ENST00000468385 KCNJ6P48051 423 aa15.32■□□□□ 0.04
PTPN7-207ENST00000468385 RBL2Q08999 1139 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms