RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 RCOR1Q9UKL0 485 aa6.83□□□□□ -1.32
USP39-213ENST00000467885 CCPG1Q9ULG6 757 aa6.83□□□□□ -1.32
USP39-213ENST00000467885 ABCB11O95342 1321 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 VPS37CA5D8V6 355 aaPredicted RBP6.82□□□□□ -1.32
USP39-213ENST00000467885 GCOM1H8Y6P7 765 aaPredicted RBP6.82□□□□□ -1.32
USP39-213ENST00000467885 NFIBO00712 420 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 WNT7AO00755 349 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 CA12O43570 354 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 TLR2O60603 784 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 POLR2MP0CAP2 368 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 BCRP11274 1271 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 HOXA13P31271 388 aaPredicted RBP6.82□□□□□ -1.32
USP39-213ENST00000467885 KRT2P35908 639 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 HSD17B4P51659 736 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 C1QTNF8P60827 252 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 BAATQ14032 418 aaPredicted RBP6.82□□□□□ -1.32
USP39-213ENST00000467885 SAFBQ15424 915 aaKnown RBP eCLIP6.82□□□□□ -1.32
USP39-213ENST00000467885 UBE2SQ16763 222 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 JAKMIP3Q5VZ66 844 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 MCTP1Q6DN14 999 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 SNRNP48Q6IEG0 339 aaKnown RBP6.82□□□□□ -1.32
USP39-213ENST00000467885 PPP1R18Q6NYC8 613 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 THSD4Q6ZMP0 1018 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.82□□□□□ -1.32
USP39-213ENST00000467885 NOSTRINQ8IVI9 506 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 C4orf32Q8N8J7 132 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 CHST13Q8NET6 341 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 RASGRP4Q8TDF6 673 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 SYTL5Q8TDW5 730 aaPredicted RBP6.82□□□□□ -1.32
USP39-213ENST00000467885 CCDC12Q8WUD4 166 aaPredicted RBP6.82□□□□□ -1.32
USP39-213ENST00000467885 PURBQ96QR8 312 aaKnown RBP6.82□□□□□ -1.32
USP39-213ENST00000467885 TEX13BQ9BXU2 312 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 PORCNQ9H237 461 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 COL20A1Q9P218 1284 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 PAPPA2Q9BXP8 1791 aa6.82□□□□□ -1.32
USP39-213ENST00000467885 ADGRA2Q96PE1 1338 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 DNAJC25-GNG10A0A024R161 153 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 CYP3A7-CYP3A51PA0A087WV96 503 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 RGS20O76081 388 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 BAG4O95429 457 aaKnown RBP6.81□□□□□ -1.32
USP39-213ENST00000467885 SLC25A27O95847 323 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 CFBP00751 764 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 FOSP01100 380 aaPredicted RBP6.81□□□□□ -1.32
USP39-213ENST00000467885 ERCC3P19447 782 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 CYP3A7P24462 503 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 USP11P51784 963 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 ADCY7P51828 1080 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 RPS6P62753 249 aaKnown RBP6.81□□□□□ -1.32
USP39-213ENST00000467885 ERVK-9P63128 1117 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 ERVK-24P63145 666 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 DNM1Q05193 864 aaKnown RBP6.81□□□□□ -1.32
USP39-213ENST00000467885 SREBF2Q12772 1141 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 GRM1Q13255 1194 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 PLS1Q14651 629 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 TMEM132AQ24JP5 1023 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 MYSM1Q5VVJ2 828 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 MCTP2Q6DN12 878 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 BRAPQ7Z569 592 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 MCF2L2Q86YR7 1114 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 ANKRD13CQ8N6S4 541 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 SHCBP1Q8NEM2 672 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 CCDC148Q8NFR7 591 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 BICD2Q8TD16 824 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 CUL5Q93034 780 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 USP28Q96RU2 1077 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 PAGR1Q9BTK6 254 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 CFHR5Q9BXR6 569 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 GLT8D2Q9H1C3 349 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 MROH8Q9H579 483 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 EFCC1Q9HA90 598 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 ZFYVE28Q9HCC9 887 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 RNF146Q9NTX7 359 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 RNF186Q9NXI6 227 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 CYP39A1Q9NYL5 469 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 CPA4Q9UI42 421 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 GJD2Q9UKL4 321 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 PNMA3Q9UL41 463 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 CTDP1Q9Y5B0 961 aaPredicted RBP6.81□□□□□ -1.32
USP39-213ENST00000467885 CLIC4Q9Y696 253 aa6.81□□□□□ -1.32
USP39-213ENST00000467885 PHIPQ8WWQ0 1821 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 SOWAHBA6NEL2 793 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 STRNO43815 780 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 COBLO75128 1261 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 TBC1D8O95759 1140 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 ALDH1A1P00352 501 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 CYP3A4P08684 503 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 HSPA6P17066 643 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 CTGFP29279 349 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 CIITAP33076 1130 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 CNTN2Q02246 1040 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 CRHR2Q13324 411 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 SLC39A14Q15043 492 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 PTPAQ15257 358 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 TAF1CQ15572 869 aaPredicted RBP6.8□□□□□ -1.32
USP39-213ENST00000467885 ZNF174Q15697 407 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 FOXD4L6Q3SYB3 417 aaPredicted RBP6.8□□□□□ -1.32
USP39-213ENST00000467885 ATL3Q6DD88 541 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 FOXD4L3Q6VB84 417 aaPredicted RBP6.8□□□□□ -1.32
USP39-213ENST00000467885 RNF207Q6ZRF8 634 aa6.8□□□□□ -1.32
USP39-213ENST00000467885 PIK3AP1Q6ZUJ8 805 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms