RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 CDC37Q16543 378 aaPredicted RBP15.82■□□□□ 0.12
CHD3-207ENST00000466233 TMEM63BQ5T3F8 832 aa15.82■□□□□ 0.12
CHD3-207ENST00000466233 CCDC62Q6P9F0 684 aa15.82■□□□□ 0.12
CHD3-207ENST00000466233 ADGRF4Q8IZF3 695 aa15.82■□□□□ 0.12
CHD3-207ENST00000466233 EMID1Q96A84 441 aaPredicted RBP15.82■□□□□ 0.12
CHD3-207ENST00000466233 GAS2L1Q99501 681 aaPredicted RBP15.82■□□□□ 0.12
CHD3-207ENST00000466233 WNT8AQ9H1J5 351 aa15.82■□□□□ 0.12
CHD3-207ENST00000466233 PARNO95453 639 aaKnown RBP15.81■□□□□ 0.12
CHD3-207ENST00000466233 PSMC6P62333 389 aa15.81■□□□□ 0.12
CHD3-207ENST00000466233 STXBP2Q15833 593 aa15.81■□□□□ 0.12
CHD3-207ENST00000466233 PHOSPHO2Q8TCD6 241 aa15.81■□□□□ 0.12
CHD3-207ENST00000466233 MTMR8Q96EF0 704 aa15.81■□□□□ 0.12
CHD3-207ENST00000466233 UBAC1Q9BSL1 405 aa15.81■□□□□ 0.12
CHD3-207ENST00000466233 PCDHA11Q9Y5I1 949 aa15.81■□□□□ 0.12
CHD3-207ENST00000466233 SLC4A7Q9Y6M7 1214 aa15.81■□□□□ 0.12
CHD3-207ENST00000466233 DDX49Q9Y6V7 483 aaKnown RBP15.81■□□□□ 0.12
CHD3-207ENST00000466233 UMODL1Q5DID0 1318 aa15.8■□□□□ 0.12
CHD3-207ENST00000466233 B4E1Z4 1266 aa15.8■□□□□ 0.12
CHD3-207ENST00000466233 EIF3JO75822 258 aaKnown RBP15.8■□□□□ 0.12
CHD3-207ENST00000466233 ACTN1P12814 892 aa15.8■□□□□ 0.12
CHD3-207ENST00000466233 BFSP2Q13515 415 aa15.8■□□□□ 0.12
CHD3-207ENST00000466233 NBPF20Q3BBV1 942 aa15.8■□□□□ 0.12
CHD3-207ENST00000466233 KCNV1Q6PIU1 500 aa15.8■□□□□ 0.12
CHD3-207ENST00000466233 FBXO11Q86XK2 927 aa15.8■□□□□ 0.12
CHD3-207ENST00000466233 SYTL5Q8TDW5 730 aaPredicted RBP15.8■□□□□ 0.12
CHD3-207ENST00000466233 VWCEQ96DN2 955 aa15.8■□□□□ 0.12
CHD3-207ENST00000466233 ZKSCAN3Q9BRR0 538 aa15.8■□□□□ 0.12
CHD3-207ENST00000466233 AMNQ9BXJ7 453 aa15.8■□□□□ 0.12
CHD3-207ENST00000466233 UBA5Q9GZZ9 404 aa15.8■□□□□ 0.12
CHD3-207ENST00000466233 SLC28A3Q9HAS3 691 aa15.8■□□□□ 0.12
CHD3-207ENST00000466233 CXXC1Q9P0U4 656 aaPredicted RBP15.8■□□□□ 0.12
CHD3-207ENST00000466233 SCN10AQ9Y5Y9 1956 aa15.79■□□□□ 0.12
CHD3-207ENST00000466233 GH1P01241 217 aa15.79■□□□□ 0.12
CHD3-207ENST00000466233 MYL3P08590 195 aa15.79■□□□□ 0.12
CHD3-207ENST00000466233 GOLGA8HP0CJ92 632 aa15.79■□□□□ 0.12
CHD3-207ENST00000466233 CCL23P55773 120 aa15.79■□□□□ 0.12
CHD3-207ENST00000466233 RBL2Q08999 1139 aa15.79■□□□□ 0.12
CHD3-207ENST00000466233 QRICH1Q2TAL8 776 aa15.79■□□□□ 0.12
CHD3-207ENST00000466233 USH1GQ495M9 461 aa15.79■□□□□ 0.12
CHD3-207ENST00000466233 CCDC155Q8N6L0 562 aa15.79■□□□□ 0.12
CHD3-207ENST00000466233 CAGE1Q8TC20 777 aa15.79■□□□□ 0.12
CHD3-207ENST00000466233 ATXN2LQ8WWM7 1075 aaKnown RBP15.79■□□□□ 0.12
CHD3-207ENST00000466233 RUFY2Q8WXA3 655 aa15.79■□□□□ 0.12
CHD3-207ENST00000466233 RMDN3Q96TC7 470 aa15.79■□□□□ 0.12
CHD3-207ENST00000466233 JMJD4Q9H9V9 463 aa15.79■□□□□ 0.12
CHD3-207ENST00000466233 TRMT13Q9NUP7 481 aaKnown RBP15.79■□□□□ 0.12
CHD3-207ENST00000466233 CDH23Q9H251 3354 aa15.78■□□□□ 0.12
CHD3-207ENST00000466233 LAMA4Q16363 1823 aa15.78■□□□□ 0.12
CHD3-207ENST00000466233 BAIAP3O94812 1187 aa15.78■□□□□ 0.12
CHD3-207ENST00000466233 IQCF3P0C7M6 154 aa15.78■□□□□ 0.12
CHD3-207ENST00000466233 TGFB3P10600 412 aa15.78■□□□□ 0.12
CHD3-207ENST00000466233 POU3F3P20264 500 aaPredicted RBP15.78■□□□□ 0.12
CHD3-207ENST00000466233 CASTP20810 708 aaKnown RBP15.78■□□□□ 0.12
CHD3-207ENST00000466233 PTGS1P23219 599 aa15.78■□□□□ 0.12
CHD3-207ENST00000466233 PBX2P40425 430 aa15.78■□□□□ 0.12
CHD3-207ENST00000466233 HSD17B4P51659 736 aa15.78■□□□□ 0.12
CHD3-207ENST00000466233 SEC23AQ15436 765 aa15.78■□□□□ 0.12
CHD3-207ENST00000466233 IFIT1BQ5T764 474 aaKnown RBP15.78■□□□□ 0.12
CHD3-207ENST00000466233 STOX1Q6ZVD7 989 aa15.78■□□□□ 0.12
CHD3-207ENST00000466233 OTOP2Q7RTS6 562 aa15.78■□□□□ 0.12
CHD3-207ENST00000466233 RETREG2Q8NC44 543 aa15.78■□□□□ 0.12
CHD3-207ENST00000466233 SLC9A7Q96T83 725 aa15.78■□□□□ 0.12
CHD3-207ENST00000466233 U3KPZ7 1027 aaPredicted RBP15.78■□□□□ 0.12
CHD3-207ENST00000466233 PALM3A6NDB9 673 aaPredicted RBP15.77■□□□□ 0.12
CHD3-207ENST00000466233 GRXCR1A8MXD5 290 aa15.77■□□□□ 0.12
CHD3-207ENST00000466233 ZBTB5O15062 677 aa15.77■□□□□ 0.12
CHD3-207ENST00000466233 ATP2A2P16615 1042 aaKnown RBP15.77■□□□□ 0.12
CHD3-207ENST00000466233 TRDNQ13061 729 aa15.77■□□□□ 0.12
CHD3-207ENST00000466233 LAMC2Q13753 1193 aa15.77■□□□□ 0.12
CHD3-207ENST00000466233 DGKDQ16760 1214 aa15.77■□□□□ 0.12
CHD3-207ENST00000466233 TJAP1Q5JTD0 557 aa15.77■□□□□ 0.12
CHD3-207ENST00000466233 EXOC6Q8TAG9 804 aa15.77■□□□□ 0.12
CHD3-207ENST00000466233 TAAR1Q96RJ0 339 aa15.77■□□□□ 0.12
CHD3-207ENST00000466233 KATNAL1Q9BW62 490 aa15.77■□□□□ 0.12
CHD3-207ENST00000466233 DDX41Q9UJV9 622 aaKnown RBP15.77■□□□□ 0.12
CHD3-207ENST00000466233 KLRF2D3W0D1 207 aa15.76■□□□□ 0.11
CHD3-207ENST00000466233 ARIH2O95376 493 aa15.76■□□□□ 0.11
CHD3-207ENST00000466233 MMP3P08254 477 aa15.76■□□□□ 0.11
CHD3-207ENST00000466233 CYP2C9P11712 490 aa15.76■□□□□ 0.11
CHD3-207ENST00000466233 HOXD8P13378 290 aaPredicted RBP15.76■□□□□ 0.11
CHD3-207ENST00000466233 ARHGAP1Q07960 439 aa15.76■□□□□ 0.11
CHD3-207ENST00000466233 ARHGEF16Q5VV41 709 aa15.76■□□□□ 0.11
CHD3-207ENST00000466233 PPTC7Q8NI37 304 aa15.76■□□□□ 0.11
CHD3-207ENST00000466233 AFAP1L1Q8TED9 768 aa15.76■□□□□ 0.11
CHD3-207ENST00000466233 MTA3Q9BTC8 594 aa15.76■□□□□ 0.11
CHD3-207ENST00000466233 PXMP2Q9NR77 195 aa15.76■□□□□ 0.11
CHD3-207ENST00000466233 COL20A1Q9P218 1284 aa15.76■□□□□ 0.11
CHD3-207ENST00000466233 CHD9Q3L8U1 2897 aa15.75■□□□□ 0.11
CHD3-207ENST00000466233 PPFIA4O75335 1185 aa15.75■□□□□ 0.11
CHD3-207ENST00000466233 NR3C2P08235 984 aa15.75■□□□□ 0.11
CHD3-207ENST00000466233 FAM47CQ5HY64 1035 aa15.75■□□□□ 0.11
CHD3-207ENST00000466233 TTC22Q5TAA0 569 aa15.75■□□□□ 0.11
CHD3-207ENST00000466233 AFG1LQ8WV93 481 aa15.75■□□□□ 0.11
CHD3-207ENST00000466233 TBC1D5Q92609 795 aa15.75■□□□□ 0.11
CHD3-207ENST00000466233 COPS5Q92905 334 aa15.75■□□□□ 0.11
CHD3-207ENST00000466233 SCLYQ96I15 445 aa15.75■□□□□ 0.11
CHD3-207ENST00000466233 MAP3K14Q99558 947 aa15.75■□□□□ 0.11
CHD3-207ENST00000466233 CPVLQ9H3G5 476 aa15.75■□□□□ 0.11
CHD3-207ENST00000466233 RIOX1Q9H6W3 641 aa15.75■□□□□ 0.11
CHD3-207ENST00000466233 MAD2L2Q9UI95 211 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms