RNA–Protein interactions for RNA: ENST00000465298.1

ERGIC3-212, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-212ENST00000465298 GPKOWQ92917 476 aaPredicted RBP eCLIP15.11■□□□□ 0.01
ERGIC3-212ENST00000465298 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.11■□□□□ 0.01
ERGIC3-212ENST00000465298 hCG_1642624A0A1W2PR95 340 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 SOWAHBA6NEL2 793 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 MEIS2O14770 477 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 OPLAHO14841 1288 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 NKRFO15226 690 aaKnown RBP eCLIP15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 MAFGO15525 162 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 NR3C2P08235 984 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 RARBP10826 455 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 CYBAP13498 195 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 CCL5P13501 91 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 PDIA4P13667 645 aaKnown RBP15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 CNGA1P29973 690 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 CCND2P30279 289 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 SAFBQ15424 915 aaKnown RBP eCLIP15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 BRDTQ58F21 947 aaPredicted RBP15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 IQSEC1Q6DN90 963 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 FCHSD1Q86WN1 690 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 SCFD2Q8WU76 684 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 SNX21Q969T3 373 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 TMX3Q96JJ7 454 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 CDHR1Q96JP9 859 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 PAK6Q9NQU5 681 aaPredicted RBP15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 PXMP2Q9NR77 195 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 DOCK3Q8IZD9 2030 aa15.1■□□□□ 0.01
ERGIC3-212ENST00000465298 BAZ2BQ9UIF8 2168 aaKnown RBP15.09■□□□□ 0.01
ERGIC3-212ENST00000465298 TGFB3P10600 412 aa15.09■□□□□ 0.01
ERGIC3-212ENST00000465298 HOXA13P31271 388 aaPredicted RBP15.09■□□□□ 0.01
ERGIC3-212ENST00000465298 CCDC83Q8IWF9 413 aa15.09■□□□□ 0.01
ERGIC3-212ENST00000465298 HSCBQ8IWL3 235 aa15.09■□□□□ 0.01
ERGIC3-212ENST00000465298 NECAB1Q8N987 351 aa15.09■□□□□ 0.01
ERGIC3-212ENST00000465298 ANKLE1Q8NAG6 615 aa15.09■□□□□ 0.01
ERGIC3-212ENST00000465298 DAGLBQ8NCG7 672 aa15.09■□□□□ 0.01
ERGIC3-212ENST00000465298 ARRDC4Q8NCT1 418 aa15.09■□□□□ 0.01
ERGIC3-212ENST00000465298 NSUN7Q8NE18 718 aaKnown RBP15.09■□□□□ 0.01
ERGIC3-212ENST00000465298 TAAR1Q96RJ0 339 aa15.09■□□□□ 0.01
ERGIC3-212ENST00000465298 PDCD2LQ9BRP1 358 aa15.09■□□□□ 0.01
ERGIC3-212ENST00000465298 ALG1Q9BT22 464 aa15.09■□□□□ 0.01
ERGIC3-212ENST00000465298 FLRT1Q9NZU1 646 aa15.09■□□□□ 0.01
ERGIC3-212ENST00000465298 DDX20Q9UHI6 824 aaKnown RBP15.09■□□□□ 0.01
ERGIC3-212ENST00000465298 ZHX1Q9UKY1 873 aaPredicted RBP15.09■□□□□ 0.01
ERGIC3-212ENST00000465298 PCDHA4Q9UN74 947 aa15.09■□□□□ 0.01
ERGIC3-212ENST00000465298 Q9Y3F1 56 aa15.09■□□□□ 0.01
ERGIC3-212ENST00000465298 MYH6P13533 1939 aa15.08■□□□□ 0
ERGIC3-212ENST00000465298 SGPL1O95470 568 aa15.08■□□□□ 0
ERGIC3-212ENST00000465298 SNAI1O95863 264 aaPredicted RBP15.08■□□□□ 0
ERGIC3-212ENST00000465298 GJA8P48165 433 aa15.08■□□□□ 0
ERGIC3-212ENST00000465298 TTLL4Q14679 1199 aa15.08■□□□□ 0
ERGIC3-212ENST00000465298 PCNX4Q63HM2 1172 aa15.08■□□□□ 0
ERGIC3-212ENST00000465298 USP17L6PQ6QN14 398 aa15.08■□□□□ 0
ERGIC3-212ENST00000465298 NLRX1Q86UT6 975 aa15.08■□□□□ 0
ERGIC3-212ENST00000465298 VSIG10LQ86VR7 867 aa15.08■□□□□ 0
ERGIC3-212ENST00000465298 TBC1D5Q92609 795 aa15.08■□□□□ 0
ERGIC3-212ENST00000465298 FGD4Q96M96 766 aa15.08■□□□□ 0
ERGIC3-212ENST00000465298 NAP1L4Q99733 375 aaKnown RBP15.08■□□□□ 0
ERGIC3-212ENST00000465298 FRMPD4Q14CM0 1322 aa15.08■□□□□ 0
ERGIC3-212ENST00000465298 CCDC85CA6NKD9 419 aa15.07■□□□□ 0
ERGIC3-212ENST00000465298 DUSP11O75319 330 aaKnown RBP15.07■□□□□ 0
ERGIC3-212ENST00000465298 ZNF865P0CJ78 1059 aaPredicted RBP15.07■□□□□ 0
ERGIC3-212ENST00000465298 EIF2AK2P19525 551 aaKnown RBP15.07■□□□□ 0
ERGIC3-212ENST00000465298 PDCP20941 246 aa15.07■□□□□ 0
ERGIC3-212ENST00000465298 PGM5Q15124 567 aa15.07■□□□□ 0
ERGIC3-212ENST00000465298 KRT25Q7Z3Z0 450 aa15.07■□□□□ 0
ERGIC3-212ENST00000465298 GIMAP8Q8ND71 665 aaPredicted RBP15.07■□□□□ 0
ERGIC3-212ENST00000465298 U2AF1L4Q8WU68 220 aaKnown RBP15.07■□□□□ 0
ERGIC3-212ENST00000465298 INTS4Q96HW7 963 aaKnown RBP15.07■□□□□ 0
ERGIC3-212ENST00000465298 DEFB118Q96PH6 123 aa15.07■□□□□ 0
ERGIC3-212ENST00000465298 UNC93B1Q9H1C4 597 aa15.07■□□□□ 0
ERGIC3-212ENST00000465298 VPS54Q9P1Q0 977 aa15.07■□□□□ 0
ERGIC3-212ENST00000465298 PCDHA6Q9UN73 950 aa15.07■□□□□ 0
ERGIC3-212ENST00000465298 SMC3Q9UQE7 1217 aa15.07■□□□□ 0
ERGIC3-212ENST00000465298 PCDHA8Q9Y5H6 950 aa15.07■□□□□ 0
ERGIC3-212ENST00000465298 K7ELQ4 463 aaPredicted RBP15.06■□□□□ 0
ERGIC3-212ENST00000465298 ZEB2O60315 1214 aa15.06■□□□□ 0
ERGIC3-212ENST00000465298 LARGE1O95461 756 aa15.06■□□□□ 0
ERGIC3-212ENST00000465298 CTDNEP1O95476 244 aa15.06■□□□□ 0
ERGIC3-212ENST00000465298 TFRCP02786 760 aaKnown RBP15.06■□□□□ 0
ERGIC3-212ENST00000465298 TNFAIP2Q03169 654 aa15.06■□□□□ 0
ERGIC3-212ENST00000465298 RNF180Q86T96 592 aa15.06■□□□□ 0
ERGIC3-212ENST00000465298 BLIDQ8IZY5 108 aa15.06■□□□□ 0
ERGIC3-212ENST00000465298 C8orf76Q96K31 380 aa15.06■□□□□ 0
ERGIC3-212ENST00000465298 ANO3Q9BYT9 981 aa15.06■□□□□ 0
ERGIC3-212ENST00000465298 COL20A1Q9P218 1284 aa15.06■□□□□ 0
ERGIC3-212ENST00000465298 CCDC194A0A1B0GVG4 234 aa15.05■□□□□ -0
ERGIC3-212ENST00000465298 RBM47A0AV96 593 aaKnown RBP15.05■□□□□ -0
ERGIC3-212ENST00000465298 HSP90AA1P07900 732 aaKnown RBP15.05■□□□□ -0
ERGIC3-212ENST00000465298 MYCLP12524 364 aaPredicted RBP15.05■□□□□ -0
ERGIC3-212ENST00000465298 TAL1P17542 331 aaPredicted RBP15.05■□□□□ -0
ERGIC3-212ENST00000465298 SREBF1P36956 1147 aa15.05■□□□□ -0
ERGIC3-212ENST00000465298 CLK2P49760 499 aaKnown RBP15.05■□□□□ -0
ERGIC3-212ENST00000465298 USP11P51784 963 aa15.05■□□□□ -0
ERGIC3-212ENST00000465298 MTFR1Q15390 333 aa15.05■□□□□ -0
ERGIC3-212ENST00000465298 CCDC144BQ3MJ40 725 aa15.05■□□□□ -0
ERGIC3-212ENST00000465298 DUSP28Q4G0W2 176 aa15.05■□□□□ -0
ERGIC3-212ENST00000465298 TYW1BQ6NUM6 668 aa15.05■□□□□ -0
ERGIC3-212ENST00000465298 PCSK9Q8NBP7 692 aaKnown RBP15.05■□□□□ -0
ERGIC3-212ENST00000465298 GPRASP2Q96D09 838 aa15.05■□□□□ -0
ERGIC3-212ENST00000465298 PHF20Q9BVI0 1012 aa15.05■□□□□ -0
ERGIC3-212ENST00000465298 CRISPLD2Q9H0B8 497 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms