RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 RBM28Q9NW13 759 aaKnown RBP15.33■□□□□ 0.04
RAB11FIP3-207ENST00000461009 NAP1L2Q9ULW6 460 aaPredicted RBP15.33■□□□□ 0.04
RAB11FIP3-207ENST00000461009 MRPL11Q9Y3B7 192 aaKnown RBP15.33■□□□□ 0.04
RAB11FIP3-207ENST00000461009 ABCB11O95342 1321 aa15.33■□□□□ 0.04
RAB11FIP3-207ENST00000461009 KLF18A0A0U1RQI7 1052 aa15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 CCDC196A0A1B0GTZ2 297 aa15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 TRIM43BA6NCK2 446 aa15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 NFIBO00712 420 aa15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 KIAA0355O15063 1070 aa15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 CPA1P15085 419 aa15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 RCAN1P53805 252 aa15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 NKX3-2P78367 333 aa15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 QRICH1Q2TAL8 776 aa15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 USH1GQ495M9 461 aa15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 C8orf34Q49A92 452 aa15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 APOA5Q6Q788 366 aa15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 MICU3Q86XE3 530 aa15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 FBXO16Q8IX29 292 aaPredicted RBP15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 DEFB123Q8N688 67 aa15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 DNERQ8NFT8 737 aa15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 MORC4Q8TE76 937 aa15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 TRIM43Q96BQ3 446 aaPredicted RBP15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 MTMR8Q96EF0 704 aa15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 RRP36Q96EU6 259 aaKnown RBP15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 SPZ1Q9BXG8 430 aa15.32■□□□□ 0.04
RAB11FIP3-207ENST00000461009 MCM3APO60318 1980 aa15.31■□□□□ 0.04
RAB11FIP3-207ENST00000461009 PNMA6FA0A0J9YX94 578 aa15.31■□□□□ 0.04
RAB11FIP3-207ENST00000461009 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.31■□□□□ 0.04
RAB11FIP3-207ENST00000461009 MYADML2A6NDP7 307 aa15.31■□□□□ 0.04
RAB11FIP3-207ENST00000461009 ARVCFO00192 962 aa15.31■□□□□ 0.04
RAB11FIP3-207ENST00000461009 SEC24BO95487 1268 aa15.31■□□□□ 0.04
RAB11FIP3-207ENST00000461009 SMPD1P17405 629 aa15.31■□□□□ 0.04
RAB11FIP3-207ENST00000461009 RPS6P62753 249 aaKnown RBP15.31■□□□□ 0.04
RAB11FIP3-207ENST00000461009 SH3RF1Q7Z6J0 888 aa15.31■□□□□ 0.04
RAB11FIP3-207ENST00000461009 CLEC4DQ8WXI8 215 aa15.31■□□□□ 0.04
RAB11FIP3-207ENST00000461009 BRF1Q92994 677 aa15.31■□□□□ 0.04
RAB11FIP3-207ENST00000461009 WDR11Q9BZH6 1224 aa15.31■□□□□ 0.04
RAB11FIP3-207ENST00000461009 PDRG1Q9NUG6 133 aa15.31■□□□□ 0.04
RAB11FIP3-207ENST00000461009 SEC63Q9UGP8 760 aaKnown RBP15.31■□□□□ 0.04
RAB11FIP3-207ENST00000461009 GNEQ9Y223 722 aaKnown RBP15.31■□□□□ 0.04
RAB11FIP3-207ENST00000461009 GOLGA8AA7E2F4 631 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 GOLGA8BA8MQT2 603 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 NKRFO15226 690 aaKnown RBP eCLIP15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 ADCY6O43306 1168 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 RXRAP19793 462 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 CPT1AP50416 773 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 BEX3Q00994 111 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 FPGSQ05932 587 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 APOBRQ0VD83 1088 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 FAAP100Q0VG06 881 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 RTN1Q16799 776 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 DUSP28Q4G0W2 176 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 TAPT1Q6NXT6 567 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 HOMER1Q86YM7 354 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 SAMD3Q8N6K7 520 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 PIGSQ96S52 555 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 AGXT2Q9BYV1 514 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 UPF2Q9HAU5 1272 aaKnown RBP15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 PDGFCQ9NRA1 345 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 BRPF3Q9ULD4 1205 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 PCDHA1Q9Y5I3 950 aa15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 RANBP2P49792 3224 aaKnown RBP15.3■□□□□ 0.04
RAB11FIP3-207ENST00000461009 ASTN1O14525 1302 aa15.29■□□□□ 0.04
RAB11FIP3-207ENST00000461009 CYTH3O43739 400 aa15.29■□□□□ 0.04
RAB11FIP3-207ENST00000461009 TIMP1P01033 207 aa15.29■□□□□ 0.04
RAB11FIP3-207ENST00000461009 METAP2P50579 478 aaKnown RBP eCLIP15.29■□□□□ 0.04
RAB11FIP3-207ENST00000461009 CDK7P50613 346 aa15.29■□□□□ 0.04
RAB11FIP3-207ENST00000461009 SHHQ15465 462 aa15.29■□□□□ 0.04
RAB11FIP3-207ENST00000461009 CXCL17Q6UXB2 119 aa15.29■□□□□ 0.04
RAB11FIP3-207ENST00000461009 SLC30A10Q6XR72 485 aa15.29■□□□□ 0.04
RAB11FIP3-207ENST00000461009 RAB11FIP4Q86YS3 637 aa15.29■□□□□ 0.04
RAB11FIP3-207ENST00000461009 SRBD1Q8N5C6 995 aaKnown RBP15.29■□□□□ 0.04
RAB11FIP3-207ENST00000461009 SCFD2Q8WU76 684 aa15.29■□□□□ 0.04
RAB11FIP3-207ENST00000461009 PURBQ96QR8 312 aaKnown RBP15.29■□□□□ 0.04
RAB11FIP3-207ENST00000461009 UPF3BQ9BZI7 483 aaKnown RBP15.29■□□□□ 0.04
RAB11FIP3-207ENST00000461009 POLR3EQ9NVU0 708 aa15.29■□□□□ 0.04
RAB11FIP3-207ENST00000461009 DNAH12Q6ZR08 3092 aa15.29■□□□□ 0.04
RAB11FIP3-207ENST00000461009 ITGA7Q13683 1181 aa15.28■□□□□ 0.04
RAB11FIP3-207ENST00000461009 ANKRD1Q15327 319 aa15.28■□□□□ 0.04
RAB11FIP3-207ENST00000461009 TMTC3Q6ZXV5 915 aa15.28■□□□□ 0.04
RAB11FIP3-207ENST00000461009 TMEM199Q8N511 208 aa15.28■□□□□ 0.04
RAB11FIP3-207ENST00000461009 NSUN6Q8TEA1 469 aaKnown RBP15.28■□□□□ 0.04
RAB11FIP3-207ENST00000461009 IL17RAQ96F46 866 aa15.28■□□□□ 0.04
RAB11FIP3-207ENST00000461009 ALDH8A1Q9H2A2 487 aaPredicted RBP15.28■□□□□ 0.04
RAB11FIP3-207ENST00000461009 MAP3K20Q9NYL2 800 aaKnown RBP15.28■□□□□ 0.04
RAB11FIP3-207ENST00000461009 CTAGE5O15320 804 aa15.27■□□□□ 0.04
RAB11FIP3-207ENST00000461009 KPNA6O60684 536 aa15.27■□□□□ 0.04
RAB11FIP3-207ENST00000461009 PLEKHA8P1O95397 391 aa15.27■□□□□ 0.04
RAB11FIP3-207ENST00000461009 EVCP57679 992 aa15.27■□□□□ 0.04
RAB11FIP3-207ENST00000461009 IRX5P78411 483 aaPredicted RBP15.27■□□□□ 0.04
RAB11FIP3-207ENST00000461009 PPIGQ13427 754 aaKnown RBP eCLIP15.27■□□□□ 0.041e-7■■□□□ 11.5
RAB11FIP3-207ENST00000461009 TTLL4Q14679 1199 aa15.27■□□□□ 0.04
RAB11FIP3-207ENST00000461009 SLC35G1Q2M3R5 365 aa15.27■□□□□ 0.04
RAB11FIP3-207ENST00000461009 ZNF697Q5TEC3 545 aa15.27■□□□□ 0.04
RAB11FIP3-207ENST00000461009 FAM109BQ6ICB4 259 aaPredicted RBP15.27■□□□□ 0.04
RAB11FIP3-207ENST00000461009 MFSD5Q6N075 450 aa15.27■□□□□ 0.04
RAB11FIP3-207ENST00000461009 CCDC82Q8N4S0 544 aa15.27■□□□□ 0.04
RAB11FIP3-207ENST00000461009 OR6J1Q8NGC5 347 aa15.27■□□□□ 0.04
RAB11FIP3-207ENST00000461009 PIBF1Q8WXW3 757 aa15.27■□□□□ 0.04
RAB11FIP3-207ENST00000461009 ZNF274Q96GC6 653 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms