RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 KCNV1Q6PIU1 500 aa11.63□□□□□ -0.55
HDLBP-228ENST00000459788 CATIPQ7Z7H3 387 aa11.63□□□□□ -0.55
HDLBP-228ENST00000459788 TMEM199Q8N511 208 aa11.63□□□□□ -0.55
HDLBP-228ENST00000459788 IGDCC4Q8TDY8 1250 aa11.63□□□□□ -0.55
HDLBP-228ENST00000459788 LRCH3Q96II8 777 aa11.63□□□□□ -0.55
HDLBP-228ENST00000459788 ESYT1Q9BSJ8 1104 aa11.63□□□□□ -0.55
HDLBP-228ENST00000459788 RBM8AQ9Y5S9 174 aaKnown RBP11.63□□□□□ -0.55
HDLBP-228ENST00000459788 TRIP12Q14669 1992 aaPredicted RBP11.63□□□□□ -0.55
HDLBP-228ENST00000459788 PNMA6FA0A0J9YX94 578 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 CALM1P0DP23 149 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 CALM2P0DP24 149 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 CALM3P0DP25 149 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 GNAQP50148 359 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 BEX3Q00994 111 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 SHHQ15465 462 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 TMEM67Q5HYA8 995 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 RNF20Q5VTR2 975 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 NFRKBQ6P4R8 1299 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 CCDC62Q6P9F0 684 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 CASC1Q6TDU7 716 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 CXCL17Q6UXB2 119 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 STOX1Q6ZVD7 989 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 EEPD1Q7L9B9 569 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 STAG2Q8N3U4 1231 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 EMID1Q96A84 441 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-228ENST00000459788 PURBQ96QR8 312 aaKnown RBP11.62□□□□□ -0.55
HDLBP-228ENST00000459788 RMDN3Q96TC7 470 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 MTG1Q9BT17 334 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-228ENST00000459788 SPZ1Q9BXG8 430 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 LSG1Q9H089 658 aaKnown RBP11.62□□□□□ -0.55
HDLBP-228ENST00000459788 GPHNQ9NQX3 736 aaPredicted RBP11.62□□□□□ -0.55
HDLBP-228ENST00000459788 KAT6AQ92794 2004 aa11.62□□□□□ -0.55
HDLBP-228ENST00000459788 TANC1Q9C0D5 1861 aa11.61□□□□□ -0.55
HDLBP-228ENST00000459788 STAM2O75886 525 aa11.61□□□□□ -0.55
HDLBP-228ENST00000459788 TXNP10599 105 aaKnown RBP11.61□□□□□ -0.55
HDLBP-228ENST00000459788 TGFB3P10600 412 aa11.61□□□□□ -0.55
HDLBP-228ENST00000459788 ITGB8P26012 769 aa11.61□□□□□ -0.55
HDLBP-228ENST00000459788 PURAQ00577 322 aaKnown RBP11.61□□□□□ -0.55
HDLBP-228ENST00000459788 NECTIN1Q15223 517 aa11.61□□□□□ -0.55
HDLBP-228ENST00000459788 TSGA10IPQ3SY00 556 aa11.61□□□□□ -0.55
HDLBP-228ENST00000459788 PSRC1Q6PGN9 363 aaPredicted RBP11.61□□□□□ -0.55
HDLBP-228ENST00000459788 DEFB123Q8N688 67 aa11.61□□□□□ -0.55
HDLBP-228ENST00000459788 OR6J1Q8NGC5 347 aa11.61□□□□□ -0.55
HDLBP-228ENST00000459788 CTCFLQ8NI51 663 aaPredicted RBP11.61□□□□□ -0.55
HDLBP-228ENST00000459788 CPVLQ9H3G5 476 aa11.61□□□□□ -0.55
HDLBP-228ENST00000459788 VAT1LQ9HCJ6 419 aa11.61□□□□□ -0.55
HDLBP-228ENST00000459788 PXMP2Q9NR77 195 aa11.61□□□□□ -0.55
HDLBP-228ENST00000459788 STXBP5LQ9Y2K9 1186 aa11.61□□□□□ -0.55
HDLBP-228ENST00000459788 PCDHA1Q9Y5I3 950 aa11.61□□□□□ -0.55
HDLBP-228ENST00000459788 GRIN2DO15399 1336 aa11.6□□□□□ -0.55
HDLBP-228ENST00000459788 COL6A3P12111 3177 aa11.6□□□□□ -0.55
HDLBP-228ENST00000459788 GH1P01241 217 aa11.6□□□□□ -0.55
HDLBP-228ENST00000459788 NR3C2P08235 984 aa11.6□□□□□ -0.55
HDLBP-228ENST00000459788 PFKMP08237 780 aa11.6□□□□□ -0.55
HDLBP-228ENST00000459788 ANTXR2P58335 489 aa11.6□□□□□ -0.55
HDLBP-228ENST00000459788 ARHGEF16Q5VV41 709 aa11.6□□□□□ -0.55
HDLBP-228ENST00000459788 ZNF654Q8IZM8 581 aa11.6□□□□□ -0.55
HDLBP-228ENST00000459788 TAAR1Q96RJ0 339 aa11.6□□□□□ -0.55
HDLBP-228ENST00000459788 MTIF3Q9H2K0 278 aaKnown RBP11.6□□□□□ -0.55
HDLBP-228ENST00000459788 LY9Q9HBG7 655 aa11.6□□□□□ -0.55
HDLBP-228ENST00000459788 MTMR10Q9NXD2 777 aa11.6□□□□□ -0.55
HDLBP-228ENST00000459788 FRMPD4Q14CM0 1322 aa11.6□□□□□ -0.55
HDLBP-228ENST00000459788 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-228ENST00000459788 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-228ENST00000459788 GCOM1H8Y6P7 765 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-228ENST00000459788 OPLAHO14841 1288 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 SLC27A2O14975 620 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 PRC1O43663 620 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 CFBP00751 764 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 POLR2MP0CAP2 368 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 IRX5P78411 483 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-228ENST00000459788 LAMC2Q13753 1193 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 C9orf50Q5SZB4 431 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 ZNF697Q5TEC3 545 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 RASIP1Q5U651 963 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 CREB3L3Q68CJ9 461 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 XRRA1Q6P2D8 792 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 VSIG10LQ86VR7 867 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 SESTD1Q86VW0 696 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 SGMS1Q86VZ5 419 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 RPUSD2Q8IZ73 545 aaKnown RBP11.59□□□□□ -0.55
HDLBP-228ENST00000459788 TBC1D5Q92609 795 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 RNPC3Q96LT9 517 aaKnown RBP11.59□□□□□ -0.55
HDLBP-228ENST00000459788 PDCD2LQ9BRP1 358 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 ALDH8A1Q9H2A2 487 aaPredicted RBP11.59□□□□□ -0.55
HDLBP-228ENST00000459788 IL23AQ9NPF7 189 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 COL20A1Q9P218 1284 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 GBF1Q92538 1859 aa11.59□□□□□ -0.55
HDLBP-228ENST00000459788 CCDC69A6NI79 296 aa11.58□□□□□ -0.56
HDLBP-228ENST00000459788 PIK3CDO00329 1044 aa11.58□□□□□ -0.56
HDLBP-228ENST00000459788 PITPNM1O00562 1244 aa11.58□□□□□ -0.56
HDLBP-228ENST00000459788 SH2B2O14492 632 aaPredicted RBP11.58□□□□□ -0.56
HDLBP-228ENST00000459788 EPB41L2O43491 1005 aaKnown RBP11.58□□□□□ -0.56
HDLBP-228ENST00000459788 CYTH3O43739 400 aa11.58□□□□□ -0.56
HDLBP-228ENST00000459788 PPP1R11O60927 126 aaPredicted RBP11.58□□□□□ -0.56
HDLBP-228ENST00000459788 CDC45O75419 566 aa11.58□□□□□ -0.56
HDLBP-228ENST00000459788 HMGB1P09429 215 aaKnown RBP11.58□□□□□ -0.56
HDLBP-228ENST00000459788 HOXD8P13378 290 aaPredicted RBP11.58□□□□□ -0.56
HDLBP-228ENST00000459788 CASTP20810 708 aaKnown RBP11.58□□□□□ -0.56
HDLBP-228ENST00000459788 RFC2P35250 354 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms