RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 USP7Q93009 1102 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 CCDC34Q96HJ3 373 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 TTC1Q99614 292 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 CORO1BQ9BR76 489 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 CHMP4BQ9H444 224 aaKnown RBP5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 GPN3Q9UHW5 284 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 ZNRF3Q9ULT6 936 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 SYNPO2Q9UMS6 1093 aa5.24□□□□□ -1.57
HMGB3P21-201ENST00000452483 MBD4O95243 580 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 HNRNPCP07910 306 aaKnown RBP eCLIP5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 MYBL2P10244 700 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 ADH5P11766 374 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 BMP3P12645 472 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 ECE1P42892 770 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 RXRGP48443 463 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 GTF2H3Q13889 308 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 KIF22Q14807 665 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 ATP13A4Q4VNC1 1196 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 EXOSC6Q5RKV6 272 aaKnown RBP5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 TPTE2Q6XPS3 522 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 C1orf122Q6ZSJ8 110 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 EPM2AIP1Q7L775 607 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 OTOP3Q7RTS5 596 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 PPM1MQ96MI6 270 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 LRRC3Q9BY71 257 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 KCNF1Q9H3M0 494 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 CXorf56Q9H5V9 222 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 C7orf69Q9H7B7 122 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 ZFYVE1Q9HBF4 777 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 DDX21Q9NR30 783 aaKnown RBP eCLIP5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 RASSF1Q9NS23 344 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 STOML1Q9UBI4 398 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 ODF2LQ9ULJ1 636 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 TTLL3Q9Y4R7 772 aa5.23□□□□□ -1.57
HMGB3P21-201ENST00000452483 A0A087WZG4 1122 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 SCO2A0A1W2PP80 73 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 hCG_1642624A0A1W2PR95 340 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 GSC2O15499 205 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 TMCC2O75069 709 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 NPTXRO95502 500 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 F13A1P00488 732 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 IFIT1P09914 478 aaKnown RBP5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 PYGMP11217 842 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 TFE3P19532 575 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 LMNB1P20700 586 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 TSPAN7P41732 249 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 PIK3CAP42336 1068 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 ZNF157P51786 506 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 PRKG2Q13237 762 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 GALEQ14376 348 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 PDE3AQ14432 1141 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 PCBP1Q15365 356 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 SGO2Q562F6 1265 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 FOXB2Q5VYV0 432 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 FAAH2Q6GMR7 532 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 RUFY4Q6ZNE9 571 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 LCA5Q86VQ0 697 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 TRIM42Q8IWZ5 723 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 C19orf47Q8N9M1 422 aaKnown RBP5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 C12orf50Q8NA57 414 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 RBBP8NLQ8NC74 664 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 C2CD4AQ8NCU7 369 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 IL17REQ8NFR9 667 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 NELL1Q92832 810 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 ATP6V1E2Q96A05 226 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 ZNF496Q96IT1 587 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 EXOC2Q96KP1 924 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 YTHDC1Q96MU7 727 aaKnown RBP5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 OSBPL5Q9H0X9 879 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 CD248Q9HCU0 757 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 ANLNQ9NQW6 1124 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 TRMT13Q9NUP7 481 aaKnown RBP5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 GIT1Q9Y2X7 761 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 ITIH6Q6UXX5 1313 aa5.22□□□□□ -1.57
HMGB3P21-201ENST00000452483 A0A1W2PQH9 124 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 HMX2A2RU54 273 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 KPNA6O60684 536 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 IGLV1-40P01703 118 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 CELA3AP09093 270 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 HSD3B1P14060 373 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 DRD2P14416 443 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 ZKSCAN1P17029 563 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 LPOP22079 712 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 CHKAP35790 457 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 APBA1Q02410 837 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 CLCQ05315 142 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 PPP2R3AQ06190 1150 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 SOX4Q06945 474 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 NFIAQ12857 509 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 G3BP1Q13283 466 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 SLC10A6Q3KNW5 377 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 FAM209AQ5JX71 171 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 AGAP9Q5VTM2 703 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 DIEXFQ68CQ4 756 aaKnown RBP5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 LMBRD2Q68DH5 695 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 HEATR6Q6AI08 1181 aaKnown RBP5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 TTBK2Q6IQ55 1244 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 BNC2Q6ZN30 1099 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 BEND4Q6ZU67 534 aa5.21□□□□□ -1.58
HMGB3P21-201ENST00000452483 TTC6Q86TZ1 520 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms