RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 LRRC41Q15345 812 aa12.59□□□□□ -0.39
SYVN1-204ENST00000449943 RSPH14Q9UHP6 348 aa12.59□□□□□ -0.39
SYVN1-204ENST00000449943 SCN7AQ01118 1682 aa12.59□□□□□ -0.39
SYVN1-204ENST00000449943 VAV2P52735 878 aa12.59□□□□□ -0.39
SYVN1-204ENST00000449943 EIF6P56537 245 aaKnown RBP12.59□□□□□ -0.39
SYVN1-204ENST00000449943 SV2BQ7L1I2 683 aa12.59□□□□□ -0.39
SYVN1-204ENST00000449943 BMP2KQ9NSY1 1161 aaPredicted RBP12.59□□□□□ -0.39
SYVN1-204ENST00000449943 ZNF219Q9P2Y4 722 aaPredicted RBP12.59□□□□□ -0.39
SYVN1-204ENST00000449943 CAPN6Q9Y6Q1 641 aa12.59□□□□□ -0.39
SYVN1-204ENST00000449943 VGLL3A8MV65 326 aa12.58□□□□□ -0.39
SYVN1-204ENST00000449943 ZNF263O14978 683 aa12.58□□□□□ -0.39
SYVN1-204ENST00000449943 PLCG2P16885 1265 aa12.58□□□□□ -0.39
SYVN1-204ENST00000449943 MCM3P25205 808 aa12.58□□□□□ -0.39
SYVN1-204ENST00000449943 PRPHP41219 470 aa12.58□□□□□ -0.39
SYVN1-204ENST00000449943 EZH2Q15910 746 aaKnown RBP12.58□□□□□ -0.39
SYVN1-204ENST00000449943 SLC10A5Q5PT55 438 aa12.58□□□□□ -0.39
SYVN1-204ENST00000449943 RRAGAQ7L523 313 aa12.58□□□□□ -0.39
SYVN1-204ENST00000449943 CCDC170Q8IYT3 715 aa12.58□□□□□ -0.39
SYVN1-204ENST00000449943 AK8Q96MA6 479 aa12.58□□□□□ -0.39
SYVN1-204ENST00000449943 MED4Q9NPJ6 270 aa12.58□□□□□ -0.39
SYVN1-204ENST00000449943 MKRN1Q9UHC7 482 aaKnown RBP12.58□□□□□ -0.39
SYVN1-204ENST00000449943 HPCAL4Q9UM19 191 aa12.58□□□□□ -0.39
SYVN1-204ENST00000449943 ANKRD65E5RJM6 399 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 USO1O60763 962 aaKnown RBP12.58□□□□□ -0.4
SYVN1-204ENST00000449943 GNA11P29992 359 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 BTDP43251 543 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 RETREG2Q8NC44 543 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 WDR66Q8TBY9 1149 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 AFAP1L1Q8TED9 768 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 C7orf25Q9BPX7 421 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 ZMYND12Q9H0C1 365 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 CUEDC2Q9H467 287 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 EHD2Q9NZN4 543 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 FEZ2Q9UHY8 353 aaPredicted RBP12.58□□□□□ -0.4
SYVN1-204ENST00000449943 POTEMA6NI47 508 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 EIF4A3P38919 411 aaKnown RBP12.58□□□□□ -0.4
SYVN1-204ENST00000449943 NFIXQ14938 502 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 CCDC70Q6NSX1 233 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 TEX11Q8IYF3 940 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 REXO1Q8N1G1 1221 aaKnown RBP12.58□□□□□ -0.4
SYVN1-204ENST00000449943 BBXQ8WY36 941 aaPredicted RBP12.58□□□□□ -0.4
SYVN1-204ENST00000449943 SELENOOQ9BVL4 669 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 MYO1CO00159 1063 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 TACC1O75410 805 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 SSBP05455 408 aaKnown RBP eCLIP12.58□□□□□ -0.4
SYVN1-204ENST00000449943 GGCXP38435 758 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 CDK8P49336 464 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 CALCRLQ16602 461 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 COG1Q8WTW3 980 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 COA7Q96BR5 231 aa12.58□□□□□ -0.4
SYVN1-204ENST00000449943 MMTAG2Q9BU76 263 aaKnown RBP12.58□□□□□ -0.4
SYVN1-204ENST00000449943 RRP15Q9Y3B9 282 aaKnown RBP12.58□□□□□ -0.4
SYVN1-204ENST00000449943 DLEC1Q9Y238 1755 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 MYMKA6NI61 221 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 USP17L5A8MUK1 530 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 NCK2O43639 380 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 SYF2O95926 243 aaKnown RBP12.57□□□□□ -0.4
SYVN1-204ENST00000449943 KIF11P52732 1056 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 SLC7A5Q01650 507 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 VWA3BQ502W6 1294 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 CCDC155Q8N6L0 562 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 NDST4Q9H3R1 872 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 PCDHA13Q9Y5I0 950 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 EPS15P42566 896 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 ENOX2Q16206 610 aaKnown RBP12.57□□□□□ -0.4
SYVN1-204ENST00000449943 CCDC181Q5TID7 509 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 NFRKBQ6P4R8 1299 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 CEP95Q96GE4 821 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 MAGEF1Q9HAY2 307 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 ARHGAP20Q9P2F6 1191 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 THRAP3Q9Y2W1 955 aaKnown RBP12.57□□□□□ -0.4
SYVN1-204ENST00000449943 TDP2O95551 362 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 TDRD12Q587J7 1177 aaKnown RBP12.57□□□□□ -0.4
SYVN1-204ENST00000449943 CACNA2D4Q7Z3S7 1137 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 GLIS3Q8NEA6 775 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 HDAC7Q8WUI4 952 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 ANKS1AQ92625 1134 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 GJA10Q969M2 543 aa12.57□□□□□ -0.4
SYVN1-204ENST00000449943 RBM17Q96I25 401 aaKnown RBP12.57□□□□□ -0.4
SYVN1-204ENST00000449943 LRRC53A6NM62 1247 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 BUB1O43683 1085 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 IVLP07476 585 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 TNNI2P48788 182 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 IQCEQ6IPM2 695 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 TMED8Q6PL24 325 aaPredicted RBP12.56□□□□□ -0.4
SYVN1-204ENST00000449943 SND1Q7KZF4 910 aaKnown RBP eCLIP12.56□□□□□ -0.45e-7■■□□□ 14.5
SYVN1-204ENST00000449943 RABEP2Q9H5N1 569 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 CASZ1Q86V15 1759 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 GRB10Q13322 594 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 LRRC47Q8N1G4 583 aaKnown RBP12.56□□□□□ -0.4
SYVN1-204ENST00000449943 SNX29Q8TEQ0 813 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 RPGRIP1Q96KN7 1286 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 LZTS2Q9BRK4 669 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 TSGA10Q9BZW7 698 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 NLRC4Q9NPP4 1024 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 PODXL2Q9NZ53 605 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 TBC1D7Q9P0N9 293 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 NARFQ9UHQ1 456 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 LAMB2P55268 1798 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 SLC37A4O43826 429 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms