RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 JAKMIP3Q5VZ66 844 aa15.23■□□□□ 0.03
HLA-DOB-207ENST00000447394 ZNF467Q7Z7K2 595 aaPredicted RBP15.23■□□□□ 0.03
HLA-DOB-207ENST00000447394 FBXO16Q8IX29 292 aaPredicted RBP15.23■□□□□ 0.03
HLA-DOB-207ENST00000447394 OXER1Q8TDS5 423 aa15.23■□□□□ 0.03
HLA-DOB-207ENST00000447394 SNX21Q969T3 373 aa15.23■□□□□ 0.03
HLA-DOB-207ENST00000447394 LENG1Q96BZ8 264 aaPredicted RBP15.23■□□□□ 0.03
HLA-DOB-207ENST00000447394 ZNF333Q96JL9 665 aa15.23■□□□□ 0.03
HLA-DOB-207ENST00000447394 ZMYND12Q9H0C1 365 aa15.23■□□□□ 0.03
HLA-DOB-207ENST00000447394 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.23■□□□□ 0.03
HLA-DOB-207ENST00000447394 BRCA2P51587 3418 aa15.23■□□□□ 0.03
HLA-DOB-207ENST00000447394 RPTORQ8N122 1335 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 ESYT2A0FGR8 921 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 MYCLP12524 364 aaPredicted RBP15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 CYBAP13498 195 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 GJB2P29033 226 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 CUL4AQ13619 759 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 PGM5Q15124 567 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 TMEM63BQ5T3F8 832 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 MAP3K21Q5TCX8 1036 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 ARHGEF16Q5VV41 709 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 MFSD14CQ5VZR4 134 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 MAMDC4Q6UXC1 1216 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 HSCBQ8IWL3 235 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 TNS4Q8IZW8 715 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 CCDC148Q8NFR7 591 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 ARMC5Q96C12 935 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 PHF20Q9BVI0 1012 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 KATNBL1Q9H079 304 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 C6orf50Q9HD87 102 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 ADD3Q9UEY8 706 aaKnown RBP15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 ZHX1Q9UKY1 873 aaPredicted RBP15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 PCDHA6Q9UN73 950 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 PCDHA8Q9Y5H6 950 aa15.22■□□□□ 0.03
HLA-DOB-207ENST00000447394 FRMPD4Q14CM0 1322 aa15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 SYNGAP1Q96PV0 1343 aa15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 ADCY6O43306 1168 aa15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 CCL5P13501 91 aa15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 EDNRBP24530 442 aa15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 PDE4DQ08499 809 aa15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 ANO1Q5XXA6 986 aa15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 KRT40Q6A162 431 aa15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 TRMT44Q8IYL2 757 aaKnown RBP15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 REXO1Q8N1G1 1221 aaKnown RBP15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 SPRYD3Q8NCJ5 442 aa15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 IL27Q8NEV9 243 aa15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 DNERQ8NFT8 737 aa15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 NSUN6Q8TEA1 469 aaKnown RBP15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 CCDC12Q8WUD4 166 aaPredicted RBP15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 PDCD2LQ9BRP1 358 aa15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 ANO3Q9BYT9 981 aa15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 SH3GLB2Q9NR46 395 aa15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 PDGFCQ9NRA1 345 aa15.21■□□□□ 0.03
HLA-DOB-207ENST00000447394 FAM205CA6NFA0 338 aa15.2■□□□□ 0.02
HLA-DOB-207ENST00000447394 ASB14A6NK59 587 aa15.2■□□□□ 0.02
HLA-DOB-207ENST00000447394 ZNF865P0CJ78 1059 aaPredicted RBP15.2■□□□□ 0.02
HLA-DOB-207ENST00000447394 CNGA1P29973 690 aa15.2■□□□□ 0.02
HLA-DOB-207ENST00000447394 MRPL12P52815 198 aaKnown RBP15.2■□□□□ 0.02
HLA-DOB-207ENST00000447394 HMGN5P82970 282 aaKnown RBP15.2■□□□□ 0.02
HLA-DOB-207ENST00000447394 FAM184AQ8NB25 1140 aa15.2■□□□□ 0.02
HLA-DOB-207ENST00000447394 MORC4Q8TE76 937 aa15.2■□□□□ 0.02
HLA-DOB-207ENST00000447394 WASF1Q92558 559 aa15.2■□□□□ 0.02
HLA-DOB-207ENST00000447394 ABHD8Q96I13 439 aa15.2■□□□□ 0.02
HLA-DOB-207ENST00000447394 MAP3K20Q9NYL2 800 aaKnown RBP15.2■□□□□ 0.02
HLA-DOB-207ENST00000447394 PCDHA4Q9UN74 947 aa15.2■□□□□ 0.02
HLA-DOB-207ENST00000447394 SMC3Q9UQE7 1217 aa15.2■□□□□ 0.02
HLA-DOB-207ENST00000447394 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.19■□□□□ 0.02
HLA-DOB-207ENST00000447394 SPDYE3A6NKU9 549 aa15.19■□□□□ 0.02
HLA-DOB-207ENST00000447394 NR3C2P08235 984 aa15.19■□□□□ 0.02
HLA-DOB-207ENST00000447394 NR5A1Q13285 461 aa15.19■□□□□ 0.02
HLA-DOB-207ENST00000447394 ACVR2BQ13705 512 aa15.19■□□□□ 0.02
HLA-DOB-207ENST00000447394 EARS2Q5JPH6 523 aaKnown RBP15.19■□□□□ 0.02
HLA-DOB-207ENST00000447394 GJC2Q5T442 439 aaPredicted RBP15.19■□□□□ 0.02
HLA-DOB-207ENST00000447394 BLIDQ8IZY5 108 aa15.19■□□□□ 0.02
HLA-DOB-207ENST00000447394 SAMD3Q8N6K7 520 aa15.19■□□□□ 0.02
HLA-DOB-207ENST00000447394 DAGLBQ8NCG7 672 aa15.19■□□□□ 0.02
HLA-DOB-207ENST00000447394 C8orf76Q96K31 380 aa15.19■□□□□ 0.02
HLA-DOB-207ENST00000447394 MAF1Q9H063 256 aa15.19■□□□□ 0.02
HLA-DOB-207ENST00000447394 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.19■□□□□ 0.02
HLA-DOB-207ENST00000447394 CNPY2Q9Y2B0 182 aa15.19■□□□□ 0.02
HLA-DOB-207ENST00000447394 MYH15Q9Y2K3 1946 aa15.18■□□□□ 0.02
HLA-DOB-207ENST00000447394 M0R2N6 131 aa15.18■□□□□ 0.02
HLA-DOB-207ENST00000447394 RGS20O76081 388 aa15.18■□□□□ 0.02
HLA-DOB-207ENST00000447394 MMP1P03956 469 aa15.18■□□□□ 0.02
HLA-DOB-207ENST00000447394 GNA11P29992 359 aa15.18■□□□□ 0.02
HLA-DOB-207ENST00000447394 ADCYAP1R1P41586 468 aa15.18■□□□□ 0.02
HLA-DOB-207ENST00000447394 MRPS9P82933 396 aaKnown RBP15.18■□□□□ 0.02
HLA-DOB-207ENST00000447394 TAPT1Q6NXT6 567 aa15.18■□□□□ 0.02
HLA-DOB-207ENST00000447394 MSL3Q8N5Y2 521 aaKnown RBP15.18■□□□□ 0.02
HLA-DOB-207ENST00000447394 RNF208Q9H0X6 261 aa15.18■□□□□ 0.02
HLA-DOB-207ENST00000447394 RTEL1Q9NZ71 1219 aa15.18■□□□□ 0.02
HLA-DOB-207ENST00000447394 KIF28PB7ZC32 967 aa15.17■□□□□ 0.02
HLA-DOB-207ENST00000447394 ARIH2O95376 493 aa15.17■□□□□ 0.02
HLA-DOB-207ENST00000447394 XBP1P17861 261 aa15.17■□□□□ 0.02
HLA-DOB-207ENST00000447394 CCND2P30279 289 aa15.17■□□□□ 0.02
HLA-DOB-207ENST00000447394 IRX5P78411 483 aaPredicted RBP15.17■□□□□ 0.02
HLA-DOB-207ENST00000447394 AP3B2Q13367 1082 aa15.17■□□□□ 0.02
HLA-DOB-207ENST00000447394 TRIM29Q14134 588 aa15.17■□□□□ 0.02
HLA-DOB-207ENST00000447394 CCDC144BQ3MJ40 725 aa15.17■□□□□ 0.02
HLA-DOB-207ENST00000447394 SEPT14Q6ZU15 432 aa15.17■□□□□ 0.02
HLA-DOB-207ENST00000447394 DIS3L2Q8IYB7 885 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms