RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 PLXNA1Q9UIW2 1896 aa16.18■□□□□ 0.18
SSBP3-208ENST00000444533 ESYT2A0FGR8 921 aa16.17■□□□□ 0.18
SSBP3-208ENST00000444533 AKR1A1P14550 325 aa16.17■□□□□ 0.18
SSBP3-208ENST00000444533 EIF2AK2P19525 551 aaKnown RBP16.17■□□□□ 0.18
SSBP3-208ENST00000444533 HMGN5P82970 282 aaKnown RBP16.17■□□□□ 0.18
SSBP3-208ENST00000444533 TRIM32Q13049 653 aa16.17■□□□□ 0.18
SSBP3-208ENST00000444533 ACVR2BQ13705 512 aa16.17■□□□□ 0.18
SSBP3-208ENST00000444533 MTFR1Q15390 333 aa16.17■□□□□ 0.18
SSBP3-208ENST00000444533 FAM184AQ8NB25 1140 aa16.17■□□□□ 0.18
SSBP3-208ENST00000444533 TBC1D5Q92609 795 aa16.17■□□□□ 0.18
SSBP3-208ENST00000444533 TAAR1Q96RJ0 339 aa16.17■□□□□ 0.18
SSBP3-208ENST00000444533 BRMS1Q9HCU9 246 aa16.17■□□□□ 0.18
SSBP3-208ENST00000444533 VTA1Q9NP79 307 aa16.17■□□□□ 0.18
SSBP3-208ENST00000444533 PXMP2Q9NR77 195 aa16.17■□□□□ 0.18
SSBP3-208ENST00000444533 RBBP6Q7Z6E9 1792 aaKnown RBP16.17■□□□□ 0.18
SSBP3-208ENST00000444533 OPLAHO14841 1288 aa16.16■□□□□ 0.18
SSBP3-208ENST00000444533 SEPT4O43236 478 aa16.16■□□□□ 0.18
SSBP3-208ENST00000444533 LARGE1O95461 756 aa16.16■□□□□ 0.18
SSBP3-208ENST00000444533 TFRCP02786 760 aaKnown RBP16.16■□□□□ 0.18
SSBP3-208ENST00000444533 GJB1P08034 283 aa16.16■□□□□ 0.18
SSBP3-208ENST00000444533 RARBP10826 455 aa16.16■□□□□ 0.18
SSBP3-208ENST00000444533 CYBAP13498 195 aa16.16■□□□□ 0.18
SSBP3-208ENST00000444533 CCND2P30279 289 aa16.16■□□□□ 0.18
SSBP3-208ENST00000444533 AP3B2Q13367 1082 aa16.16■□□□□ 0.18
SSBP3-208ENST00000444533 PKN1Q16512 942 aa16.16■□□□□ 0.18
SSBP3-208ENST00000444533 GALNT17Q6IS24 598 aa16.16■□□□□ 0.18
SSBP3-208ENST00000444533 USP17L6PQ6QN14 398 aa16.16■□□□□ 0.18
SSBP3-208ENST00000444533 DEFB118Q96PH6 123 aa16.16■□□□□ 0.18
SSBP3-208ENST00000444533 ZMYND12Q9H0C1 365 aa16.16■□□□□ 0.18
SSBP3-208ENST00000444533 SPC25Q9HBM1 224 aa16.16■□□□□ 0.18
SSBP3-208ENST00000444533 VPS54Q9P1Q0 977 aa16.16■□□□□ 0.18
SSBP3-208ENST00000444533 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.16■□□□□ 0.18
SSBP3-208ENST00000444533 SMCHD1A6NHR9 2005 aa16.16■□□□□ 0.18
SSBP3-208ENST00000444533 STAM2O75886 525 aa16.15■□□□□ 0.18
SSBP3-208ENST00000444533 SNAI1O95863 264 aaPredicted RBP16.15■□□□□ 0.18
SSBP3-208ENST00000444533 NR3C2P08235 984 aa16.15■□□□□ 0.18
SSBP3-208ENST00000444533 MYCLP12524 364 aaPredicted RBP16.15■□□□□ 0.18
SSBP3-208ENST00000444533 CCND3P30281 292 aaPredicted RBP16.15■□□□□ 0.18
SSBP3-208ENST00000444533 PRAMEF19Q5SWL8 479 aa16.15■□□□□ 0.18
SSBP3-208ENST00000444533 XRRA1Q6P2D8 792 aa16.15■□□□□ 0.18
SSBP3-208ENST00000444533 EEPD1Q7L9B9 569 aa16.15■□□□□ 0.18
SSBP3-208ENST00000444533 REXO1Q8N1G1 1221 aaKnown RBP16.15■□□□□ 0.18
SSBP3-208ENST00000444533 NSUN7Q8NE18 718 aaKnown RBP16.15■□□□□ 0.18
SSBP3-208ENST00000444533 PURBQ96QR8 312 aaKnown RBP16.15■□□□□ 0.18
SSBP3-208ENST00000444533 ALG1Q9BT22 464 aa16.15■□□□□ 0.18
SSBP3-208ENST00000444533 PAK6Q9NQU5 681 aaPredicted RBP16.15■□□□□ 0.18
SSBP3-208ENST00000444533 DDX20Q9UHI6 824 aaKnown RBP16.15■□□□□ 0.18
SSBP3-208ENST00000444533 MEIS2O14770 477 aa16.14■□□□□ 0.17
SSBP3-208ENST00000444533 EIF3JO75822 258 aaKnown RBP16.14■□□□□ 0.17
SSBP3-208ENST00000444533 UBE2SQ16763 222 aa16.14■□□□□ 0.17
SSBP3-208ENST00000444533 GNPTABQ3T906 1256 aa16.14■□□□□ 0.17
SSBP3-208ENST00000444533 IQSEC1Q6DN90 963 aa16.14■□□□□ 0.17
SSBP3-208ENST00000444533 MORC4Q8TE76 937 aa16.14■□□□□ 0.17
SSBP3-208ENST00000444533 U2AF1L4Q8WU68 220 aaKnown RBP16.14■□□□□ 0.17
SSBP3-208ENST00000444533 SCFD2Q8WU76 684 aa16.14■□□□□ 0.17
SSBP3-208ENST00000444533 TMX3Q96JJ7 454 aa16.14■□□□□ 0.17
SSBP3-208ENST00000444533 FGD4Q96M96 766 aa16.14■□□□□ 0.17
SSBP3-208ENST00000444533 PDCD2LQ9BRP1 358 aa16.14■□□□□ 0.17
SSBP3-208ENST00000444533 COL20A1Q9P218 1284 aa16.14■□□□□ 0.17
SSBP3-208ENST00000444533 SGPL1O95470 568 aa16.13■□□□□ 0.17
SSBP3-208ENST00000444533 IGHA2P01877 340 aa16.13■□□□□ 0.17
SSBP3-208ENST00000444533 EDNRBP24530 442 aa16.13■□□□□ 0.17
SSBP3-208ENST00000444533 GJA8P48165 433 aa16.13■□□□□ 0.17
SSBP3-208ENST00000444533 TNFAIP2Q03169 654 aa16.13■□□□□ 0.17
SSBP3-208ENST00000444533 PGM5Q15124 567 aa16.13■□□□□ 0.17
SSBP3-208ENST00000444533 SAFBQ15424 915 aaKnown RBP eCLIP16.13■□□□□ 0.17
SSBP3-208ENST00000444533 CCDC144BQ3MJ40 725 aa16.13■□□□□ 0.17
SSBP3-208ENST00000444533 KCNV1Q6PIU1 500 aa16.13■□□□□ 0.17
SSBP3-208ENST00000444533 HSCBQ8IWL3 235 aa16.13■□□□□ 0.17
SSBP3-208ENST00000444533 FBXO16Q8IX29 292 aaPredicted RBP16.13■□□□□ 0.17
SSBP3-208ENST00000444533 ARRDC4Q8NCT1 418 aa16.13■□□□□ 0.17
SSBP3-208ENST00000444533 PCDHA6Q9UN73 950 aa16.13■□□□□ 0.17
SSBP3-208ENST00000444533 PCDHA8Q9Y5H6 950 aa16.13■□□□□ 0.17
SSBP3-208ENST00000444533 CTDNEP1O95476 244 aa16.12■□□□□ 0.17
SSBP3-208ENST00000444533 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
SSBP3-208ENST00000444533 ZNF865P0CJ78 1059 aaPredicted RBP16.12■□□□□ 0.17
SSBP3-208ENST00000444533 ZNF76P36508 570 aa16.12■□□□□ 0.17
SSBP3-208ENST00000444533 TTLL4Q14679 1199 aa16.12■□□□□ 0.17
SSBP3-208ENST00000444533 BRDTQ58F21 947 aaPredicted RBP16.12■□□□□ 0.17
SSBP3-208ENST00000444533 PCNX4Q63HM2 1172 aa16.12■□□□□ 0.17
SSBP3-208ENST00000444533 TYW1BQ6NUM6 668 aa16.12■□□□□ 0.17
SSBP3-208ENST00000444533 NLRX1Q86UT6 975 aa16.12■□□□□ 0.17
SSBP3-208ENST00000444533 AP5M1Q9H0R1 490 aa16.12■□□□□ 0.17
SSBP3-208ENST00000444533 XPNPEP3Q9NQH7 507 aa16.12■□□□□ 0.17
SSBP3-208ENST00000444533 PCDHA4Q9UN74 947 aa16.12■□□□□ 0.17
SSBP3-208ENST00000444533 ASTN1O14525 1302 aa16.12■□□□□ 0.17
SSBP3-208ENST00000444533 NKRFO15226 690 aaKnown RBP eCLIP16.11■□□□□ 0.17
SSBP3-208ENST00000444533 JAK2O60674 1132 aa16.11■□□□□ 0.17
SSBP3-208ENST00000444533 CAPN15O75808 1086 aa16.11■□□□□ 0.17
SSBP3-208ENST00000444533 HSP90AA1P07900 732 aaKnown RBP16.11■□□□□ 0.17
SSBP3-208ENST00000444533 SOX10P56693 466 aa16.11■□□□□ 0.17
SSBP3-208ENST00000444533 GNL2Q13823 731 aaKnown RBP16.11■□□□□ 0.17
SSBP3-208ENST00000444533 JAKMIP3Q5VZ66 844 aa16.11■□□□□ 0.17
SSBP3-208ENST00000444533 SEPT14Q6ZU15 432 aa16.11■□□□□ 0.17
SSBP3-208ENST00000444533 RNF180Q86T96 592 aa16.11■□□□□ 0.17
SSBP3-208ENST00000444533 VSIG10LQ86VR7 867 aa16.11■□□□□ 0.17
SSBP3-208ENST00000444533 BLIDQ8IZY5 108 aa16.11■□□□□ 0.17
SSBP3-208ENST00000444533 TRPV1Q8NER1 839 aa16.11■□□□□ 0.17
SSBP3-208ENST00000444533 CDHR1Q96JP9 859 aa16.11■□□□□ 0.17
SSBP3-208ENST00000444533 C8orf76Q96K31 380 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms