RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 ATP2A2P16615 1042 aaKnown RBP9.8□□□□□ -0.84
TOP3B-209ENST00000442653 PDE4DQ08499 809 aa9.8□□□□□ -0.84
TOP3B-209ENST00000442653 HDAC1Q13547 482 aaPredicted RBP9.8□□□□□ -0.84
TOP3B-209ENST00000442653 PPP2R5BQ15173 497 aa9.8□□□□□ -0.84
TOP3B-209ENST00000442653 NBPF20Q3BBV1 942 aa9.8□□□□□ -0.84
TOP3B-209ENST00000442653 FAM47CQ5HY64 1035 aa9.8□□□□□ -0.84
TOP3B-209ENST00000442653 PPP2R2DQ66LE6 453 aa9.8□□□□□ -0.84
TOP3B-209ENST00000442653 MFSD6Q6ZSS7 791 aa9.8□□□□□ -0.84
TOP3B-209ENST00000442653 DEFB128Q7Z7B8 93 aa9.8□□□□□ -0.84
TOP3B-209ENST00000442653 RPUSD2Q8IZ73 545 aaKnown RBP9.8□□□□□ -0.84
TOP3B-209ENST00000442653 ADAMTS19Q8TE59 1207 aa9.8□□□□□ -0.84
TOP3B-209ENST00000442653 SCFD2Q8WU76 684 aa9.8□□□□□ -0.84
TOP3B-209ENST00000442653 ZKSCAN3Q9BRR0 538 aa9.8□□□□□ -0.84
TOP3B-209ENST00000442653 PCDHA11Q9Y5I1 949 aa9.8□□□□□ -0.84
TOP3B-209ENST00000442653 TET1Q8NFU7 2136 aa9.79□□□□□ -0.84
TOP3B-209ENST00000442653 TANC1Q9C0D5 1861 aa9.79□□□□□ -0.84
TOP3B-209ENST00000442653 ARHGEF15O94989 841 aa9.79□□□□□ -0.84
TOP3B-209ENST00000442653 CA3P07451 260 aa9.79□□□□□ -0.84
TOP3B-209ENST00000442653 PFKMP08237 780 aa9.79□□□□□ -0.84
TOP3B-209ENST00000442653 SUPT20HL2P0C7V6 817 aa9.79□□□□□ -0.84
TOP3B-209ENST00000442653 TXNP10599 105 aaKnown RBP9.79□□□□□ -0.84
TOP3B-209ENST00000442653 USH1GQ495M9 461 aa9.79□□□□□ -0.84
TOP3B-209ENST00000442653 NFRKBQ6P4R8 1299 aa9.79□□□□□ -0.84
TOP3B-209ENST00000442653 DNERQ8NFT8 737 aa9.79□□□□□ -0.84
TOP3B-209ENST00000442653 TBC1D5Q92609 795 aa9.79□□□□□ -0.84
TOP3B-209ENST00000442653 TTC14Q96N46 770 aa9.79□□□□□ -0.84
TOP3B-209ENST00000442653 CTAGE1Q96RT6 745 aa9.79□□□□□ -0.84
TOP3B-209ENST00000442653 LNPKQ9C0E8 428 aa9.79□□□□□ -0.84
TOP3B-209ENST00000442653 UBA5Q9GZZ9 404 aa9.79□□□□□ -0.84
TOP3B-209ENST00000442653 GPHNQ9NQX3 736 aaPredicted RBP9.79□□□□□ -0.84
TOP3B-209ENST00000442653 COL20A1Q9P218 1284 aa9.79□□□□□ -0.84
TOP3B-209ENST00000442653 ZBTB47Q9UFB7 747 aaPredicted RBP9.79□□□□□ -0.84
TOP3B-209ENST00000442653 LAMA4Q16363 1823 aa9.78□□□□□ -0.84
TOP3B-209ENST00000442653 EPOPA6NHQ4 379 aa9.78□□□□□ -0.84
TOP3B-209ENST00000442653 RFXAPO00287 272 aa9.78□□□□□ -0.84
TOP3B-209ENST00000442653 PITPNM1O00562 1244 aa9.78□□□□□ -0.84
TOP3B-209ENST00000442653 NKRFO15226 690 aaKnown RBP eCLIP9.78□□□□□ -0.84
TOP3B-209ENST00000442653 IQCF3P0C7M6 154 aa9.78□□□□□ -0.84
TOP3B-209ENST00000442653 PCP11498 1178 aaKnown RBP9.78□□□□□ -0.84
TOP3B-209ENST00000442653 CHMP4BP1P59074 171 aa9.78□□□□□ -0.84
TOP3B-209ENST00000442653 MRPS5P82675 430 aaKnown RBP9.78□□□□□ -0.84
TOP3B-209ENST00000442653 TFF2Q03403 129 aa9.78□□□□□ -0.84
TOP3B-209ENST00000442653 CCDC62Q6P9F0 684 aa9.78□□□□□ -0.84
TOP3B-209ENST00000442653 TICAM2Q86XR7 235 aa9.78□□□□□ -0.84
TOP3B-209ENST00000442653 MICALL1Q8N3F8 863 aa9.78□□□□□ -0.84
TOP3B-209ENST00000442653 AFG1LQ8WV93 481 aa9.78□□□□□ -0.84
TOP3B-209ENST00000442653 NECAB3Q96P71 396 aaPredicted RBP9.78□□□□□ -0.84
TOP3B-209ENST00000442653 CERS4Q9HA82 394 aa9.78□□□□□ -0.84
TOP3B-209ENST00000442653 PNMA2Q9UL42 364 aa9.78□□□□□ -0.84
TOP3B-209ENST00000442653 RAD50Q92878 1312 aa9.78□□□□□ -0.84
TOP3B-209ENST00000442653 BRWD1Q9NSI6 2320 aa9.77□□□□□ -0.85
TOP3B-209ENST00000442653 TRIM6-TRIM34B2RNG4 842 aa9.77□□□□□ -0.85
TOP3B-209ENST00000442653 KPNA6O60684 536 aa9.77□□□□□ -0.85
TOP3B-209ENST00000442653 KDM4AO75164 1064 aa9.77□□□□□ -0.85
TOP3B-209ENST00000442653 ARHGAP1Q07960 439 aa9.77□□□□□ -0.85
TOP3B-209ENST00000442653 GPNMBQ14956 572 aa9.77□□□□□ -0.85
TOP3B-209ENST00000442653 CDC37Q16543 378 aaPredicted RBP9.77□□□□□ -0.85
TOP3B-209ENST00000442653 BRDTQ58F21 947 aaPredicted RBP9.77□□□□□ -0.85
TOP3B-209ENST00000442653 TMEM67Q5HYA8 995 aa9.77□□□□□ -0.85
TOP3B-209ENST00000442653 GPATCH4Q5T3I0 446 aaKnown RBP9.77□□□□□ -0.85
TOP3B-209ENST00000442653 KRT40Q6A162 431 aa9.77□□□□□ -0.85
TOP3B-209ENST00000442653 SEPT14Q6ZU15 432 aa9.77□□□□□ -0.85
TOP3B-209ENST00000442653 SPRED2Q7Z698 418 aa9.77□□□□□ -0.85
TOP3B-209ENST00000442653 PNMA1Q8ND90 353 aa9.77□□□□□ -0.85
TOP3B-209ENST00000442653 RGS22Q8NE09 1264 aa9.77□□□□□ -0.85
TOP3B-209ENST00000442653 SYTL5Q8TDW5 730 aaPredicted RBP9.77□□□□□ -0.85
TOP3B-209ENST00000442653 ESR2Q92731 530 aa9.77□□□□□ -0.85
TOP3B-209ENST00000442653 KAT2BQ92831 832 aa9.77□□□□□ -0.85
TOP3B-209ENST00000442653 RILPL2Q969X0 211 aa9.77□□□□□ -0.85
TOP3B-209ENST00000442653 TAAR1Q96RJ0 339 aa9.77□□□□□ -0.85
TOP3B-209ENST00000442653 UHRF1Q96T88 793 aaPredicted RBP9.77□□□□□ -0.85
TOP3B-209ENST00000442653 RNF41Q9H4P4 317 aaPredicted RBP9.77□□□□□ -0.85
TOP3B-209ENST00000442653 PTPRSQ13332 1948 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 B4E1Z4 1266 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 MMP3P08254 477 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 ACTN1P12814 892 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 BMP1P13497 986 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 SDSP20132 328 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 RFC2P35250 354 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 KCNQ1P51787 676 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 TAP1Q03518 808 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 PTPN11Q06124 597 aaPredicted RBP9.76□□□□□ -0.85
TOP3B-209ENST00000442653 PTGISQ16647 500 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 LY6KQ17RY6 165 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 GDF6Q6KF10 455 aaPredicted RBP9.76□□□□□ -0.85
TOP3B-209ENST00000442653 B4GALNT3Q6L9W6 998 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 TMCO2Q7Z6W1 182 aaPredicted RBP9.76□□□□□ -0.85
TOP3B-209ENST00000442653 DGKHQ86XP1 1220 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 HERC6Q8IVU3 1022 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 SMC5Q8IY18 1101 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 ADGRF4Q8IZF3 695 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 ENAHQ8N8S7 591 aaPredicted RBP9.76□□□□□ -0.85
TOP3B-209ENST00000442653 DHX38Q92620 1227 aaKnown RBP9.76□□□□□ -0.85
TOP3B-209ENST00000442653 SLC9A7Q96T83 725 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 MPHOSPH6Q99547 160 aaKnown RBP9.76□□□□□ -0.85
TOP3B-209ENST00000442653 FTOQ9C0B1 505 aaKnown RBP eCLIP9.76□□□□□ -0.85
TOP3B-209ENST00000442653 RAPGEFL1Q9UHV5 662 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 NOD1Q9Y239 953 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 MTCH2Q9Y6C9 303 aa9.76□□□□□ -0.85
TOP3B-209ENST00000442653 TRIP12Q14669 1992 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms