RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 ANKRD13CQ8N6S4 541 aa14.08□□□□□ -0.16
CTCFL-204ENST00000422869 JPH2Q9BR39 696 aaPredicted RBP14.08□□□□□ -0.16
CTCFL-204ENST00000422869 FAM207AQ9NSI2 230 aaPredicted RBP14.08□□□□□ -0.16
CTCFL-204ENST00000422869 M0R2N6 131 aa14.08□□□□□ -0.16
CTCFL-204ENST00000422869 SEC24CP53992 1094 aa14.08□□□□□ -0.16
CTCFL-204ENST00000422869 PDE4DQ08499 809 aa14.08□□□□□ -0.16
CTCFL-204ENST00000422869 CD302Q8IX05 232 aa14.08□□□□□ -0.16
CTCFL-204ENST00000422869 TRIM9Q9C026 710 aa14.08□□□□□ -0.16
CTCFL-204ENST00000422869 ATP6V1AP38606 617 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 DYNLL1P63167 89 aaKnown RBP14.07□□□□□ -0.16
CTCFL-204ENST00000422869 HDLBPQ00341 1268 aaKnown RBP14.07□□□□□ -0.16
CTCFL-204ENST00000422869 CCDC178Q5BJE1 867 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 MYCBPAPQ8TBZ2 947 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 GPKOWQ92917 476 aaPredicted RBP eCLIP14.07□□□□□ -0.16
CTCFL-204ENST00000422869 IQCDQ96DY2 449 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 EPB41L5Q9HCM4 733 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 LRRC53A6NM62 1247 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 AKR1B10O60218 316 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 HEXIM1O94992 359 aaKnown RBP14.07□□□□□ -0.16
CTCFL-204ENST00000422869 IL2RBP14784 551 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 CALML3P27482 149 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 GUCY2DQ02846 1103 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 ASTE1Q2TB18 679 aaPredicted RBP14.07□□□□□ -0.16
CTCFL-204ENST00000422869 NLRP14Q86W24 1093 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 CCT8L2Q96SF2 557 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 BRIP1Q9BX63 1249 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 SEMA6BQ9H3T3 888 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 VCPKMTQ9H867 229 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 CD248Q9HCU0 757 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 ABCF2Q9UG63 623 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 PCDHA4Q9UN74 947 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 COL1A1P02452 1464 aaPredicted RBP14.07□□□□□ -0.16
CTCFL-204ENST00000422869 BUB1O43683 1085 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 CLSTN1O94985 981 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 PLCG1P19174 1290 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 MDH1P40925 334 aaKnown RBP14.07□□□□□ -0.16
CTCFL-204ENST00000422869 MAGEA1P43355 309 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 PSEN1P49768 467 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 GFPT1Q06210 699 aaPredicted RBP14.07□□□□□ -0.16
CTCFL-204ENST00000422869 CFAP221Q4G0U5 840 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 MICALCLQ6ZW33 695 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 KIAA0895Q8NCT3 520 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 IFT81Q8WYA0 676 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 PIGBQ92521 554 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 HPS3Q969F9 1004 aa14.07□□□□□ -0.16
CTCFL-204ENST00000422869 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.07□□□□□ -0.16
CTCFL-204ENST00000422869 GUCY2FP51841 1108 aa14.06□□□□□ -0.16
CTCFL-204ENST00000422869 SETQ01105 290 aaPredicted RBP14.06□□□□□ -0.16
CTCFL-204ENST00000422869 ACTN3Q08043 901 aaPredicted RBP14.06□□□□□ -0.16
CTCFL-204ENST00000422869 PAK2Q13177 524 aa14.06□□□□□ -0.16
CTCFL-204ENST00000422869 ITGB3BPQ13352 177 aaPredicted RBP14.06□□□□□ -0.16
CTCFL-204ENST00000422869 TRADDQ15628 312 aa14.06□□□□□ -0.16
CTCFL-204ENST00000422869 VWA3BQ502W6 1294 aa14.06□□□□□ -0.16
CTCFL-204ENST00000422869 CCDC155Q8N6L0 562 aa14.06□□□□□ -0.16
CTCFL-204ENST00000422869 BAP1Q92560 729 aa14.06□□□□□ -0.16
CTCFL-204ENST00000422869 ZKSCAN4Q969J2 545 aaPredicted RBP14.06□□□□□ -0.16
CTCFL-204ENST00000422869 ATP6V1G3Q96LB4 118 aa14.06□□□□□ -0.16
CTCFL-204ENST00000422869 LAMB1P07942 1786 aa14.06□□□□□ -0.16
CTCFL-204ENST00000422869 PCP11498 1178 aaKnown RBP14.06□□□□□ -0.16
CTCFL-204ENST00000422869 SLC1A4P43007 532 aa14.06□□□□□ -0.16
CTCFL-204ENST00000422869 RASSF7Q02833 373 aa14.06□□□□□ -0.16
CTCFL-204ENST00000422869 FAM47AQ5JRC9 791 aa14.06□□□□□ -0.16
CTCFL-204ENST00000422869 C6orf89Q6UWU4 347 aa14.06□□□□□ -0.16
CTCFL-204ENST00000422869 CCDC13Q8IYE1 715 aa14.06□□□□□ -0.16
CTCFL-204ENST00000422869 C1orf131Q8NDD1 294 aaKnown RBP14.06□□□□□ -0.16
CTCFL-204ENST00000422869 CASKIN2Q8WXE0 1202 aa14.06□□□□□ -0.16
CTCFL-204ENST00000422869 NDST4Q9H3R1 872 aa14.06□□□□□ -0.16
CTCFL-204ENST00000422869 COL5A2P05997 1499 aaPredicted RBP14.06□□□□□ -0.16
CTCFL-204ENST00000422869 RASSF9O75901 435 aa14.05□□□□□ -0.16
CTCFL-204ENST00000422869 FAM107AO95990 144 aa14.05□□□□□ -0.16
CTCFL-204ENST00000422869 RRAGAQ7L523 313 aa14.05□□□□□ -0.16
CTCFL-204ENST00000422869 ZNF384Q8TF68 577 aa14.05□□□□□ -0.16
CTCFL-204ENST00000422869 NOX5Q96PH1 765 aa14.05□□□□□ -0.16
CTCFL-204ENST00000422869 SMTNP53814 917 aa14.05□□□□□ -0.16
CTCFL-204ENST00000422869 INF2Q27J81 1249 aa14.05□□□□□ -0.16
CTCFL-204ENST00000422869 TMC4Q7Z404 712 aa14.05□□□□□ -0.16
CTCFL-204ENST00000422869 C7orf25Q9BPX7 421 aa14.05□□□□□ -0.16
CTCFL-204ENST00000422869 CUEDC2Q9H467 287 aa14.05□□□□□ -0.16
CTCFL-204ENST00000422869 GGA2Q9UJY4 613 aa14.05□□□□□ -0.16
CTCFL-204ENST00000422869 PCDHA6Q9UN73 950 aa14.05□□□□□ -0.16
CTCFL-204ENST00000422869 ZBTB1Q9Y2K1 713 aa14.05□□□□□ -0.16
CTCFL-204ENST00000422869 PCDHA8Q9Y5H6 950 aa14.05□□□□□ -0.16
CTCFL-204ENST00000422869 ITGB4P16144 1822 aa14.05□□□□□ -0.16
CTCFL-204ENST00000422869 COL4A1P02462 1669 aa14.05□□□□□ -0.16
CTCFL-204ENST00000422869 USP17L12C9JPN9 530 aa14.04□□□□□ -0.16
CTCFL-204ENST00000422869 USP17L21D6R901 530 aa14.04□□□□□ -0.16
CTCFL-204ENST00000422869 CCDC172P0C7W6 258 aa14.04□□□□□ -0.16
CTCFL-204ENST00000422869 ASIC1P78348 528 aa14.04□□□□□ -0.16
CTCFL-204ENST00000422869 IFT88Q13099 833 aa14.04□□□□□ -0.16
CTCFL-204ENST00000422869 PLCB4Q15147 1175 aa14.04□□□□□ -0.16
CTCFL-204ENST00000422869 RNF187Q5TA31 235 aaPredicted RBP14.04□□□□□ -0.16
CTCFL-204ENST00000422869 HGSNATQ68CP4 663 aa14.04□□□□□ -0.16
CTCFL-204ENST00000422869 ZNF34Q8IZ26 560 aa14.04□□□□□ -0.16
CTCFL-204ENST00000422869 SLC4A9Q96Q91 983 aa14.04□□□□□ -0.16
CTCFL-204ENST00000422869 MMRN2Q9H8L6 949 aa14.04□□□□□ -0.16
CTCFL-204ENST00000422869 MAGEF1Q9HAY2 307 aa14.04□□□□□ -0.16
CTCFL-204ENST00000422869 SH3GLB2Q9NR46 395 aa14.04□□□□□ -0.16
CTCFL-204ENST00000422869 KLC4Q9NSK0 619 aa14.04□□□□□ -0.16
CTCFL-204ENST00000422869 RNF14Q9UBS8 474 aa14.04□□□□□ -0.16
CTCFL-204ENST00000422869 TSKSQ9UJT2 592 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms