RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 STAG2Q8N3U4 1231 aa10.02□□□□□ -0.81
MDC1-204ENST00000422266 OR6J1Q8NGC5 347 aa10.02□□□□□ -0.81
MDC1-204ENST00000422266 SYTL5Q8TDW5 730 aaPredicted RBP10.02□□□□□ -0.81
MDC1-204ENST00000422266 IGDCC4Q8TDY8 1250 aa10.02□□□□□ -0.81
MDC1-204ENST00000422266 BADQ92934 168 aa10.02□□□□□ -0.81
MDC1-204ENST00000422266 RRP36Q96EU6 259 aaKnown RBP10.02□□□□□ -0.81
MDC1-204ENST00000422266 SPZ1Q9BXG8 430 aa10.02□□□□□ -0.81
MDC1-204ENST00000422266 LSG1Q9H089 658 aaKnown RBP10.02□□□□□ -0.81
MDC1-204ENST00000422266 MTIF3Q9H2K0 278 aaKnown RBP10.02□□□□□ -0.81
MDC1-204ENST00000422266 MCM3APO60318 1980 aa10.02□□□□□ -0.81
MDC1-204ENST00000422266 RANBP2P49792 3224 aaKnown RBP10.02□□□□□ -0.81
MDC1-204ENST00000422266 TRIM43BA6NCK2 446 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 SLC27A2O14975 620 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 CTAGE5O15320 804 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 ADCY6O43306 1168 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 PRC1O43663 620 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 TGFB3P10600 412 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 BEX3Q00994 111 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 PTPN11Q06124 597 aaPredicted RBP10.01□□□□□ -0.81
MDC1-204ENST00000422266 NECTIN1Q15223 517 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 CREB3L3Q68CJ9 461 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 FAM109BQ6ICB4 259 aaPredicted RBP10.01□□□□□ -0.81
MDC1-204ENST00000422266 MFSD5Q6N075 450 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 CXCL17Q6UXB2 119 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 HOMER1Q86YM7 354 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 FAM126BQ8IXS8 530 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 ZNF654Q8IZM8 581 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 SLC43A3Q8NBI5 491 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 CUL5Q93034 780 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 TRIM43Q96BQ3 446 aaPredicted RBP10.01□□□□□ -0.81
MDC1-204ENST00000422266 MTG1Q9BT17 334 aaPredicted RBP10.01□□□□□ -0.81
MDC1-204ENST00000422266 CPVLQ9H3G5 476 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 LY9Q9HBG7 655 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 PXMP2Q9NR77 195 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 PDGFCQ9NRA1 345 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 SLC12A7Q9Y666 1083 aa10.01□□□□□ -0.81
MDC1-204ENST00000422266 A6NJR5 290 aa10□□□□□ -0.81
MDC1-204ENST00000422266 EPB41L2O43491 1005 aaKnown RBP10□□□□□ -0.81
MDC1-204ENST00000422266 REC8O95072 547 aa10□□□□□ -0.81
MDC1-204ENST00000422266 GH1P01241 217 aa10□□□□□ -0.81
MDC1-204ENST00000422266 NR3C2P08235 984 aa10□□□□□ -0.81
MDC1-204ENST00000422266 CASTP20810 708 aaKnown RBP10□□□□□ -0.81
MDC1-204ENST00000422266 SMAD3P84022 425 aaKnown RBP10□□□□□ -0.81
MDC1-204ENST00000422266 PURAQ00577 322 aaKnown RBP10□□□□□ -0.81
MDC1-204ENST00000422266 LAMC2Q13753 1193 aa10□□□□□ -0.81
MDC1-204ENST00000422266 TSGA10IPQ3SY00 556 aa10□□□□□ -0.81
MDC1-204ENST00000422266 GNPTABQ3T906 1256 aa10□□□□□ -0.81
MDC1-204ENST00000422266 ERICH6BQ5W0A0 696 aa10□□□□□ -0.81
MDC1-204ENST00000422266 NFRKBQ6P4R8 1299 aa10□□□□□ -0.81
MDC1-204ENST00000422266 PSRC1Q6PGN9 363 aaPredicted RBP10□□□□□ -0.81
MDC1-204ENST00000422266 STOX1Q6ZVD7 989 aa10□□□□□ -0.81
MDC1-204ENST00000422266 EMID1Q96A84 441 aaPredicted RBP10□□□□□ -0.81
MDC1-204ENST00000422266 NEK1Q96PY6 1258 aa10□□□□□ -0.81
MDC1-204ENST00000422266 PURBQ96QR8 312 aaKnown RBP10□□□□□ -0.81
MDC1-204ENST00000422266 KATNAL1Q9BW62 490 aa10□□□□□ -0.81
MDC1-204ENST00000422266 RBM28Q9NW13 759 aaKnown RBP10□□□□□ -0.81
MDC1-204ENST00000422266 TBX21Q9UL17 535 aa10□□□□□ -0.81
MDC1-204ENST00000422266 TMEM265A0A087WTH1 108 aa9.99□□□□□ -0.81
MDC1-204ENST00000422266 SH2B2O14492 632 aaPredicted RBP9.99□□□□□ -0.81
MDC1-204ENST00000422266 EIF5BO60841 1220 aaKnown RBP9.99□□□□□ -0.81
MDC1-204ENST00000422266 CD4P01730 458 aa9.99□□□□□ -0.81
MDC1-204ENST00000422266 PFKMP08237 780 aa9.99□□□□□ -0.81
MDC1-204ENST00000422266 CCND2P30279 289 aa9.99□□□□□ -0.81
MDC1-204ENST00000422266 RCAN1P53805 252 aa9.99□□□□□ -0.81
MDC1-204ENST00000422266 DGKDQ16760 1214 aa9.99□□□□□ -0.81
MDC1-204ENST00000422266 XRRA1Q6P2D8 792 aa9.99□□□□□ -0.81
MDC1-204ENST00000422266 SEPT14Q6ZU15 432 aa9.99□□□□□ -0.81
MDC1-204ENST00000422266 CHST3Q7LGC8 479 aa9.99□□□□□ -0.81
MDC1-204ENST00000422266 SH3RF1Q7Z6J0 888 aa9.99□□□□□ -0.81
MDC1-204ENST00000422266 SGMS1Q86VZ5 419 aa9.99□□□□□ -0.81
MDC1-204ENST00000422266 RPUSD2Q8IZ73 545 aaKnown RBP9.99□□□□□ -0.81
MDC1-204ENST00000422266 RNPC3Q96LT9 517 aaKnown RBP9.99□□□□□ -0.81
MDC1-204ENST00000422266 TAAR1Q96RJ0 339 aa9.99□□□□□ -0.81
MDC1-204ENST00000422266 PIGSQ96S52 555 aa9.99□□□□□ -0.81
MDC1-204ENST00000422266 HIPK3Q9H422 1215 aa9.99□□□□□ -0.81
MDC1-204ENST00000422266 MRVI1Q9Y6F6 885 aa9.99□□□□□ -0.81
MDC1-204ENST00000422266 DNAH12Q6ZR08 3092 aa9.99□□□□□ -0.81
MDC1-204ENST00000422266 MYH6P13533 1939 aa9.99□□□□□ -0.81
MDC1-204ENST00000422266 CCDC196A0A1B0GTZ2 297 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 hCG_1984214I3L0E3 225 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 PARNO95453 639 aaKnown RBP9.98□□□□□ -0.81
MDC1-204ENST00000422266 MYL3P08590 195 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 EIF2AK2P19525 551 aaKnown RBP9.98□□□□□ -0.81
MDC1-204ENST00000422266 ANTXR2P58335 489 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 FGD1P98174 961 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 SHHQ15465 462 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 ZNF697Q5TEC3 545 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 CCDC62Q6P9F0 684 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 DHX32Q7L7V1 743 aaKnown RBP9.98□□□□□ -0.81
MDC1-204ENST00000422266 VSIG10LQ86VR7 867 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 DEFB123Q8N688 67 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 CCDC155Q8N6L0 562 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 ZNF713Q8N859 430 aaPredicted RBP9.98□□□□□ -0.81
MDC1-204ENST00000422266 PPTC7Q8NI37 304 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 SMARCC2Q8TAQ2 1214 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 LRCH3Q96II8 777 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 CDHR1Q96JP9 859 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 PDCD2LQ9BRP1 358 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 GLT8D2Q9H1C3 349 aa9.98□□□□□ -0.81
MDC1-204ENST00000422266 ALDH8A1Q9H2A2 487 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms