RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ZNF318Q5VUA4 2279 aa21.14■□□□□ 0.97
VCP-202ENST00000417448 TRIOO75962 3097 aa21.14■□□□□ 0.97
VCP-202ENST00000417448 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.13■□□□□ 0.97
VCP-202ENST00000417448 TMEM232C9JQI7 657 aa21.13■□□□□ 0.97
VCP-202ENST00000417448 RBAK-RBAKDNI3L0D1 243 aa21.13■□□□□ 0.97
VCP-202ENST00000417448 PITPNM1O00562 1244 aa21.13■□□□□ 0.97
VCP-202ENST00000417448 PPARAQ07869 468 aa21.13■□□□□ 0.97
VCP-202ENST00000417448 SLFN13Q68D06 897 aa21.13■□□□□ 0.97
VCP-202ENST00000417448 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.13■□□□□ 0.97
VCP-202ENST00000417448 MORC4Q8TE76 937 aa21.13■□□□□ 0.97
VCP-202ENST00000417448 FTOQ9C0B1 505 aaKnown RBP eCLIP21.13■□□□□ 0.97
VCP-202ENST00000417448 VTA1Q9NP79 307 aa21.13■□□□□ 0.97
VCP-202ENST00000417448 POLR3EQ9NVU0 708 aa21.13■□□□□ 0.97
VCP-202ENST00000417448 CYP39A1Q9NYL5 469 aa21.13■□□□□ 0.97
VCP-202ENST00000417448 MYL3P08590 195 aa21.12■□□□□ 0.97
VCP-202ENST00000417448 ALAS1P13196 640 aa21.12■□□□□ 0.97
VCP-202ENST00000417448 IL9P15248 144 aa21.12■□□□□ 0.97
VCP-202ENST00000417448 NHLH1Q02575 133 aa21.12■□□□□ 0.97
VCP-202ENST00000417448 PTH1RQ03431 593 aa21.12■□□□□ 0.97
VCP-202ENST00000417448 NBPF20Q3BBV1 942 aa21.12■□□□□ 0.97
VCP-202ENST00000417448 BMP2KLQ5H9B9 411 aa21.12■□□□□ 0.97
VCP-202ENST00000417448 FAM47CQ5HY64 1035 aa21.12■□□□□ 0.97
VCP-202ENST00000417448 SNX27Q96L92 541 aa21.12■□□□□ 0.97
VCP-202ENST00000417448 LMCD1Q9NZU5 365 aa21.12■□□□□ 0.97
VCP-202ENST00000417448 SYNPO2Q9UMS6 1093 aa21.12■□□□□ 0.97
VCP-202ENST00000417448 USP34Q70CQ2 3546 aa21.11■□□□□ 0.97
VCP-202ENST00000417448 TTLL1O95922 423 aa21.11■□□□□ 0.97
VCP-202ENST00000417448 FDX1P10109 184 aa21.11■□□□□ 0.97
VCP-202ENST00000417448 STAT2P52630 851 aa21.11■□□□□ 0.97
VCP-202ENST00000417448 SNAP25P60880 206 aa21.11■□□□□ 0.97
VCP-202ENST00000417448 ALX1Q15699 326 aa21.11■□□□□ 0.97
VCP-202ENST00000417448 CHMP4CQ96CF2 233 aa21.11■□□□□ 0.97
VCP-202ENST00000417448 UIMC1Q96RL1 719 aa21.11■□□□□ 0.97
VCP-202ENST00000417448 SUGCTQ9HAC7 445 aa21.11■□□□□ 0.97
VCP-202ENST00000417448 MTUS1Q9ULD2 1270 aa21.11■□□□□ 0.97
VCP-202ENST00000417448 C5orf42Q9H799 3197 aa21.11■□□□□ 0.97
VCP-202ENST00000417448 LAMA4Q16363 1823 aa21.11■□□□□ 0.97
VCP-202ENST00000417448 BAIAP3O94812 1187 aa21.1■□□□□ 0.97
VCP-202ENST00000417448 WDR5P61964 334 aaKnown RBP21.1■□□□□ 0.97
VCP-202ENST00000417448 GPNMBQ14956 572 aa21.1■□□□□ 0.97
VCP-202ENST00000417448 TKFCQ3LXA3 575 aa21.1■□□□□ 0.97
VCP-202ENST00000417448 LEXMQ3ZCV2 418 aa21.1■□□□□ 0.97
VCP-202ENST00000417448 MTG1Q9BT17 334 aaPredicted RBP21.1■□□□□ 0.97
VCP-202ENST00000417448 WDR11Q9BZH6 1224 aa21.1■□□□□ 0.97
VCP-202ENST00000417448 SGSM2O43147 1006 aa21.09■□□□□ 0.97
VCP-202ENST00000417448 KCNA5P22460 613 aa21.09■□□□□ 0.97
VCP-202ENST00000417448 MFAP1P55081 439 aaKnown RBP21.09■□□□□ 0.97
VCP-202ENST00000417448 DEFB103AP81534 67 aa21.09■□□□□ 0.97
VCP-202ENST00000417448 FBXL18Q96ME1 805 aa21.09■□□□□ 0.97
VCP-202ENST00000417448 ISY1Q9ULR0 285 aaKnown RBP21.09■□□□□ 0.97
VCP-202ENST00000417448 PLIN4Q96Q06 1357 aa21.09■□□□□ 0.97
VCP-202ENST00000417448 SSTR3P32745 418 aaPredicted RBP21.08■□□□□ 0.97
VCP-202ENST00000417448 CPT1AP50416 773 aa21.08■□□□□ 0.97
VCP-202ENST00000417448 NFRKBQ6P4R8 1299 aa21.08■□□□□ 0.97
VCP-202ENST00000417448 NSMFQ6X4W1 530 aa21.08■□□□□ 0.97
VCP-202ENST00000417448 RASGRP2Q7LDG7 609 aa21.08■□□□□ 0.97
VCP-202ENST00000417448 ZNF444Q8N0Y2 327 aaPredicted RBP21.08■□□□□ 0.97
VCP-202ENST00000417448 RETREG2Q8NC44 543 aa21.08■□□□□ 0.97
VCP-202ENST00000417448 STAG1Q8WVM7 1258 aa21.08■□□□□ 0.97
VCP-202ENST00000417448 RUFY2Q8WXA3 655 aa21.08■□□□□ 0.97
VCP-202ENST00000417448 RBM47A0AV96 593 aaKnown RBP21.07■□□□□ 0.96
VCP-202ENST00000417448 KCNJ6P48051 423 aa21.07■□□□□ 0.96
VCP-202ENST00000417448 TCTN1Q2MV58 587 aa21.07■□□□□ 0.96
VCP-202ENST00000417448 FAM160B2Q86V87 743 aa21.07■□□□□ 0.96
VCP-202ENST00000417448 OR6J1Q8NGC5 347 aa21.07■□□□□ 0.96
VCP-202ENST00000417448 CTAGE1Q96RT6 745 aa21.07■□□□□ 0.96
VCP-202ENST00000417448 ESYT1Q9BSJ8 1104 aa21.07■□□□□ 0.96
VCP-202ENST00000417448 ALADP13716 330 aa21.06■□□□□ 0.96
VCP-202ENST00000417448 ALDH5A1P51649 535 aaPredicted RBP21.06■□□□□ 0.96
VCP-202ENST00000417448 ERVK-21P61565 698 aa21.06■□□□□ 0.96
VCP-202ENST00000417448 IKQ13123 557 aaPredicted RBP21.06■□□□□ 0.96
VCP-202ENST00000417448 RRP12Q5JTH9 1297 aaKnown RBP21.06■□□□□ 0.96
VCP-202ENST00000417448 PTCRAQ6ISU1 281 aaPredicted RBP21.06■□□□□ 0.96
VCP-202ENST00000417448 KCTD1Q719H9 257 aa21.06■□□□□ 0.96
VCP-202ENST00000417448 TBC1D10CQ8IV04 446 aa21.06■□□□□ 0.96
VCP-202ENST00000417448 CHURC1Q8WUH1 139 aa21.06■□□□□ 0.96
VCP-202ENST00000417448 ANKS1AQ92625 1134 aa21.06■□□□□ 0.96
VCP-202ENST00000417448 GMCL1Q96IK5 515 aa21.06■□□□□ 0.96
VCP-202ENST00000417448 GPHNQ9NQX3 736 aaPredicted RBP21.06■□□□□ 0.96
VCP-202ENST00000417448 TOMM22Q9NS69 142 aa21.06■□□□□ 0.96
VCP-202ENST00000417448 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.06■□□□□ 0.96
VCP-202ENST00000417448 LINC01553A4QN01 128 aa21.05■□□□□ 0.96
VCP-202ENST00000417448 GRXCR2A6NFK2 248 aa21.05■□□□□ 0.96
VCP-202ENST00000417448 MCCP23508 829 aa21.05■□□□□ 0.96
VCP-202ENST00000417448 SLC1A4P43007 532 aa21.05■□□□□ 0.96
VCP-202ENST00000417448 PDE4BQ07343 736 aa21.05■□□□□ 0.96
VCP-202ENST00000417448 BFSP2Q13515 415 aa21.05■□□□□ 0.96
VCP-202ENST00000417448 NEDD1Q8NHV4 660 aa21.05■□□□□ 0.96
VCP-202ENST00000417448 ZBED2Q9BTP6 218 aa21.05■□□□□ 0.96
VCP-202ENST00000417448 DSCC1Q9BVC3 393 aa21.05■□□□□ 0.96
VCP-202ENST00000417448 ANAPC4Q9UJX5 808 aa21.05■□□□□ 0.96
VCP-202ENST00000417448 PRR12Q9ULL5 1215 aa21.05■□□□□ 0.96
VCP-202ENST00000417448 RAD50Q92878 1312 aa21.04■□□□□ 0.96
VCP-202ENST00000417448 POTEB3A0JP26 581 aa21.04■□□□□ 0.96
VCP-202ENST00000417448 PLA2G6O60733 806 aa21.04■□□□□ 0.96
VCP-202ENST00000417448 CDC45O75419 566 aa21.04■□□□□ 0.96
VCP-202ENST00000417448 GJB5O95377 273 aa21.04■□□□□ 0.96
VCP-202ENST00000417448 SLC3A2P08195 630 aaKnown RBP21.04■□□□□ 0.96
VCP-202ENST00000417448 TFAP4Q01664 338 aa21.04■□□□□ 0.96
VCP-202ENST00000417448 PTPN11Q06124 597 aaPredicted RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms