RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 DOCK5Q9H7D0 1870 aa14.02□□□□□ -0.16
LINC00544-201ENST00000400540 ZMYM6O95789 1325 aa14.02□□□□□ -0.17
LINC00544-201ENST00000400540 NEDD4P46934 1319 aa14.02□□□□□ -0.17
LINC00544-201ENST00000400540 LOC102724159A0A0B4J2E5 919 aa14.02□□□□□ -0.17
LINC00544-201ENST00000400540 EPOPA6NHQ4 379 aa14.02□□□□□ -0.17
LINC00544-201ENST00000400540 SUPT20HL2P0C7V6 817 aa14.02□□□□□ -0.17
LINC00544-201ENST00000400540 GOLGA8HP0CJ92 632 aa14.02□□□□□ -0.17
LINC00544-201ENST00000400540 COL9A1P20849 921 aa14.02□□□□□ -0.17
LINC00544-201ENST00000400540 TFF2Q03403 129 aa14.02□□□□□ -0.17
LINC00544-201ENST00000400540 PDE4DQ08499 809 aa14.02□□□□□ -0.17
LINC00544-201ENST00000400540 PWP2Q15269 919 aaKnown RBP14.02□□□□□ -0.17
LINC00544-201ENST00000400540 USH1GQ495M9 461 aa14.02□□□□□ -0.17
LINC00544-201ENST00000400540 NECAB3Q96P71 396 aaPredicted RBP14.02□□□□□ -0.17
LINC00544-201ENST00000400540 CRBNQ96SW2 442 aa14.02□□□□□ -0.17
LINC00544-201ENST00000400540 UHRF1Q96T88 793 aaPredicted RBP14.02□□□□□ -0.17
LINC00544-201ENST00000400540 ZKSCAN3Q9BRR0 538 aa14.02□□□□□ -0.17
LINC00544-201ENST00000400540 GPHNQ9NQX3 736 aaPredicted RBP14.02□□□□□ -0.17
LINC00544-201ENST00000400540 CCDC171Q6TFL3 1326 aa14.01□□□□□ -0.17
LINC00544-201ENST00000400540 WDR19Q8NEZ3 1342 aa14.01□□□□□ -0.17
LINC00544-201ENST00000400540 PFKMP08237 780 aa14.01□□□□□ -0.17
LINC00544-201ENST00000400540 SNHG28P0DPA3 235 aa14.01□□□□□ -0.17
LINC00544-201ENST00000400540 RRP1P56182 461 aaKnown RBP14.01□□□□□ -0.17
LINC00544-201ENST00000400540 CHMP4BP1P59074 171 aa14.01□□□□□ -0.17
LINC00544-201ENST00000400540 KRT40Q6A162 431 aa14.01□□□□□ -0.17
LINC00544-201ENST00000400540 SCFD2Q8WU76 684 aa14.01□□□□□ -0.17
LINC00544-201ENST00000400540 RAD50Q92878 1312 aa14□□□□□ -0.17
LINC00544-201ENST00000400540 A6NJR5 290 aa14□□□□□ -0.17
LINC00544-201ENST00000400540 NKRFO15226 690 aaKnown RBP eCLIP14□□□□□ -0.17
LINC00544-201ENST00000400540 IQCF3P0C7M6 154 aa14□□□□□ -0.17
LINC00544-201ENST00000400540 TXNP10599 105 aaKnown RBP14□□□□□ -0.17
LINC00544-201ENST00000400540 TMEM67Q5HYA8 995 aa14□□□□□ -0.17
LINC00544-201ENST00000400540 NFRKBQ6P4R8 1299 aa14□□□□□ -0.17
LINC00544-201ENST00000400540 SPRED2Q7Z698 418 aa14□□□□□ -0.17
LINC00544-201ENST00000400540 DNERQ8NFT8 737 aa14□□□□□ -0.17
LINC00544-201ENST00000400540 TBC1D5Q92609 795 aa14□□□□□ -0.17
LINC00544-201ENST00000400540 UBA5Q9GZZ9 404 aa14□□□□□ -0.17
LINC00544-201ENST00000400540 ZBTB47Q9UFB7 747 aaPredicted RBP14□□□□□ -0.17
LINC00544-201ENST00000400540 MICAL3Q7RTP6 2002 aa14□□□□□ -0.17
LINC00544-201ENST00000400540 PITPNM1O00562 1244 aa13.99□□□□□ -0.17
LINC00544-201ENST00000400540 ACTN1P12814 892 aa13.99□□□□□ -0.17
LINC00544-201ENST00000400540 KCNQ1P51787 676 aa13.99□□□□□ -0.17
LINC00544-201ENST00000400540 BRDTQ58F21 947 aaPredicted RBP13.99□□□□□ -0.17
LINC00544-201ENST00000400540 MFSD6Q6ZSS7 791 aa13.99□□□□□ -0.17
LINC00544-201ENST00000400540 CTAGE1Q96RT6 745 aa13.99□□□□□ -0.17
LINC00544-201ENST00000400540 SLC9A7Q96T83 725 aa13.99□□□□□ -0.17
LINC00544-201ENST00000400540 COL20A1Q9P218 1284 aa13.99□□□□□ -0.17
LINC00544-201ENST00000400540 MTCH2Q9Y6C9 303 aa13.99□□□□□ -0.17
LINC00544-201ENST00000400540 NLRC5Q86WI3 1866 aa13.98□□□□□ -0.17
LINC00544-201ENST00000400540 TRIM6-TRIM34B2RNG4 842 aa13.98□□□□□ -0.17
LINC00544-201ENST00000400540 MMP3P08254 477 aa13.98□□□□□ -0.17
LINC00544-201ENST00000400540 BMP1P13497 986 aa13.98□□□□□ -0.17
LINC00544-201ENST00000400540 RFC2P35250 354 aa13.98□□□□□ -0.17
LINC00544-201ENST00000400540 SKIV2LQ15477 1246 aaKnown RBP13.98□□□□□ -0.17
LINC00544-201ENST00000400540 CDC37Q16543 378 aaPredicted RBP13.98□□□□□ -0.17
LINC00544-201ENST00000400540 LY6KQ17RY6 165 aa13.98□□□□□ -0.17
LINC00544-201ENST00000400540 GDF6Q6KF10 455 aaPredicted RBP13.98□□□□□ -0.17
LINC00544-201ENST00000400540 CCDC62Q6P9F0 684 aa13.98□□□□□ -0.17
LINC00544-201ENST00000400540 TMCO2Q7Z6W1 182 aaPredicted RBP13.98□□□□□ -0.17
LINC00544-201ENST00000400540 HERC6Q8IVU3 1022 aa13.98□□□□□ -0.17
LINC00544-201ENST00000400540 IL27Q8NEV9 243 aa13.98□□□□□ -0.17
LINC00544-201ENST00000400540 AFG1LQ8WV93 481 aa13.98□□□□□ -0.17
LINC00544-201ENST00000400540 ARNTL2Q8WYA1 636 aa13.98□□□□□ -0.17
LINC00544-201ENST00000400540 RILPL2Q969X0 211 aa13.98□□□□□ -0.17
LINC00544-201ENST00000400540 TTC14Q96N46 770 aa13.98□□□□□ -0.17
LINC00544-201ENST00000400540 TAAR1Q96RJ0 339 aa13.98□□□□□ -0.17
LINC00544-201ENST00000400540 MPHOSPH6Q99547 160 aaKnown RBP13.98□□□□□ -0.17
LINC00544-201ENST00000400540 FTOQ9C0B1 505 aaKnown RBP eCLIP13.98□□□□□ -0.17
LINC00544-201ENST00000400540 LNPKQ9C0E8 428 aa13.98□□□□□ -0.17
LINC00544-201ENST00000400540 ATG2AQ2TAZ0 1938 aa13.98□□□□□ -0.17
LINC00544-201ENST00000400540 KPNA6O60684 536 aa13.97□□□□□ -0.17
LINC00544-201ENST00000400540 TAP1Q03518 808 aa13.97□□□□□ -0.17
LINC00544-201ENST00000400540 PTPN11Q06124 597 aaPredicted RBP13.97□□□□□ -0.17
LINC00544-201ENST00000400540 ARHGAP1Q07960 439 aa13.97□□□□□ -0.17
LINC00544-201ENST00000400540 GPNMBQ14956 572 aa13.97□□□□□ -0.17
LINC00544-201ENST00000400540 PTGISQ16647 500 aa13.97□□□□□ -0.17
LINC00544-201ENST00000400540 GPATCH4Q5T3I0 446 aaKnown RBP13.97□□□□□ -0.17
LINC00544-201ENST00000400540 SEPT14Q6ZU15 432 aa13.97□□□□□ -0.17
LINC00544-201ENST00000400540 CHST3Q7LGC8 479 aa13.97□□□□□ -0.17
LINC00544-201ENST00000400540 RETREG2Q8NC44 543 aa13.97□□□□□ -0.17
LINC00544-201ENST00000400540 DHX38Q92620 1227 aaKnown RBP13.97□□□□□ -0.17
LINC00544-201ENST00000400540 KAT2BQ92831 832 aa13.97□□□□□ -0.17
LINC00544-201ENST00000400540 TSPYL2Q9H2G4 693 aaPredicted RBP13.97□□□□□ -0.17
LINC00544-201ENST00000400540 PNMA2Q9UL42 364 aa13.97□□□□□ -0.17
LINC00544-201ENST00000400540 NOD1Q9Y239 953 aa13.97□□□□□ -0.17
LINC00544-201ENST00000400540 LCHNA4D1U4 455 aa13.96□□□□□ -0.17
LINC00544-201ENST00000400540 KDM4AO75164 1064 aa13.96□□□□□ -0.17
LINC00544-201ENST00000400540 BFSP2Q13515 415 aa13.96□□□□□ -0.17
LINC00544-201ENST00000400540 HDAC1Q13547 482 aaPredicted RBP13.96□□□□□ -0.17
LINC00544-201ENST00000400540 TCTN1Q2MV58 587 aa13.96□□□□□ -0.17
LINC00544-201ENST00000400540 ADGRF4Q8IZF3 695 aa13.96□□□□□ -0.17
LINC00544-201ENST00000400540 PNMA1Q8ND90 353 aa13.96□□□□□ -0.17
LINC00544-201ENST00000400540 PHOSPHO2Q8TCD6 241 aa13.96□□□□□ -0.17
LINC00544-201ENST00000400540 SYTL5Q8TDW5 730 aaPredicted RBP13.96□□□□□ -0.17
LINC00544-201ENST00000400540 ESR2Q92731 530 aa13.96□□□□□ -0.17
LINC00544-201ENST00000400540 ABCB11O95342 1321 aa13.95□□□□□ -0.18
LINC00544-201ENST00000400540 B4E1Z4 1266 aa13.95□□□□□ -0.18
LINC00544-201ENST00000400540 GTPBP6O43824 516 aaPredicted RBP13.95□□□□□ -0.18
LINC00544-201ENST00000400540 GH1P01241 217 aa13.95□□□□□ -0.18
LINC00544-201ENST00000400540 PCP11498 1178 aaKnown RBP13.95□□□□□ -0.18
LINC00544-201ENST00000400540 EIF2AK2P19525 551 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms