RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 KRT25Q7Z3Z0 450 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 VSIG10LQ86VR7 867 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 TRIB2Q92519 343 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 TCEANC2Q96MN5 208 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 SENP7Q9BQF6 1050 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 FOXP1Q9H334 677 aaPredicted RBP8.64□□□□□ -1.03
USP16-204ENST00000399976 V9GY48 417 aaPredicted RBP8.64□□□□□ -1.03
USP16-204ENST00000399976 NFASCO94856 1347 aa8.64□□□□□ -1.03
USP16-204ENST00000399976 PTPDC1A2A3K4 754 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 SEPT4O43236 478 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 RAD21O60216 631 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 KPNA6O60684 536 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 ZNF865P0CJ78 1059 aaPredicted RBP8.63□□□□□ -1.03
USP16-204ENST00000399976 FDPSP14324 419 aaKnown RBP8.63□□□□□ -1.03
USP16-204ENST00000399976 BAATQ14032 418 aaPredicted RBP8.63□□□□□ -1.03
USP16-204ENST00000399976 NPY5RQ15761 445 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 CPXCR1Q8N123 301 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 TNFRSF25Q93038 417 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 INPP4AQ96PE3 977 aaPredicted RBP8.63□□□□□ -1.03
USP16-204ENST00000399976 PDCD2LQ9BRP1 358 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 OGDHLQ9ULD0 1010 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 ASTN1O14525 1302 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 SLC26A4O43511 780 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 GJB1P08034 283 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 NAPAP54920 295 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 STXBP2Q15833 593 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 C1orf53Q5VUE5 145 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 SLC30A10Q6XR72 485 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 BRMS1Q9HCU9 246 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 UBIAD1Q9Y5Z9 338 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 SCN10AQ9Y5Y9 1956 aa8.63□□□□□ -1.03
USP16-204ENST00000399976 ARID2Q68CP9 1835 aa8.62□□□□□ -1.03
USP16-204ENST00000399976 TBX3O15119 743 aa8.62□□□□□ -1.03
USP16-204ENST00000399976 LARGE1O95461 756 aa8.62□□□□□ -1.03
USP16-204ENST00000399976 MMP1P03956 469 aa8.62□□□□□ -1.03
USP16-204ENST00000399976 AKR1A1P14550 325 aa8.62□□□□□ -1.03
USP16-204ENST00000399976 PGM5Q15124 567 aa8.62□□□□□ -1.03
USP16-204ENST00000399976 SLC9C1Q4G0N8 1177 aa8.62□□□□□ -1.03
USP16-204ENST00000399976 ARMCX2Q7L311 632 aa8.62□□□□□ -1.03
USP16-204ENST00000399976 REXO1Q8N1G1 1221 aaKnown RBP8.62□□□□□ -1.03
USP16-204ENST00000399976 SLC26A6Q9BXS9 759 aa8.62□□□□□ -1.03
USP16-204ENST00000399976 HMX1Q9NP08 348 aaPredicted RBP8.62□□□□□ -1.03
USP16-204ENST00000399976 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.62□□□□□ -1.03
USP16-204ENST00000399976 ORC3Q9UBD5 711 aaPredicted RBP8.62□□□□□ -1.03
USP16-204ENST00000399976 TANC1Q9C0D5 1861 aa8.62□□□□□ -1.03
USP16-204ENST00000399976 SMCO2A6NFE2 343 aa8.62□□□□□ -1.03
USP16-204ENST00000399976 DUSP11O75319 330 aaKnown RBP8.62□□□□□ -1.03
USP16-204ENST00000399976 SNAI1O95863 264 aaPredicted RBP8.62□□□□□ -1.03
USP16-204ENST00000399976 INHAP05111 366 aa8.62□□□□□ -1.03
USP16-204ENST00000399976 PPP4R3AQ6IN85 833 aa8.62□□□□□ -1.03
USP16-204ENST00000399976 SCFD2Q8WU76 684 aa8.62□□□□□ -1.03
USP16-204ENST00000399976 FAM184BQ9ULE4 1060 aa8.62□□□□□ -1.03
USP16-204ENST00000399976 ALPK3Q96L96 1907 aa8.62□□□□□ -1.03
USP16-204ENST00000399976 BAZ2BQ9UIF8 2168 aaKnown RBP8.61□□□□□ -1.03
USP16-204ENST00000399976 U2AF2P26368 475 aaKnown RBP eCLIP8.61□□□□□ -1.034e-8■■■■■ 30.7
USP16-204ENST00000399976 GJA8P48165 433 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 RGS19P49795 217 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 GJA9P57773 515 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 GNPTABQ3T906 1256 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 Q4G0T1 1027 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 HEATR3Q7Z4Q2 680 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 BLIDQ8IZY5 108 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 KCTD17Q8N5Z5 321 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 FBXO18Q8NFZ0 1043 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 RDM1Q8NG50 284 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 CNPY2Q9Y2B0 182 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 SPDYE3A6NKU9 549 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 CCT2P78371 535 aaKnown RBP8.61□□□□□ -1.03
USP16-204ENST00000399976 CACNB2Q08289 660 aaPredicted RBP8.61□□□□□ -1.03
USP16-204ENST00000399976 ACVR2BQ13705 512 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 DUSP28Q4G0W2 176 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 TYW1BQ6NUM6 668 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 TAPT1Q6NXT6 567 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 CCDC62Q6P9F0 684 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 NLRX1Q86UT6 975 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 RMDN3Q96TC7 470 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.61□□□□□ -1.03
USP16-204ENST00000399976 FLRT1Q9NZU1 646 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 COL20A1Q9P218 1284 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 DDX20Q9UHI6 824 aaKnown RBP8.61□□□□□ -1.03
USP16-204ENST00000399976 GNEQ9Y223 722 aaKnown RBP8.61□□□□□ -1.03
USP16-204ENST00000399976 FIBPO43427 364 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 CABYRO75952 493 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 NR3C2P08235 984 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 RXRAP19793 462 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 KRT2P35908 639 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 PTPN11Q06124 597 aaPredicted RBP8.61□□□□□ -1.03
USP16-204ENST00000399976 PDE4DQ08499 809 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 TRIM29Q14134 588 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 USH1GQ495M9 461 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 UBE2Q1Q7Z7E8 422 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 HOMER1Q86YM7 354 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 HSCBQ8IWL3 235 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 ALG1Q9BT22 464 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 ANO3Q9BYT9 981 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 NCOA5Q9HCD5 579 aaKnown RBP8.61□□□□□ -1.03
USP16-204ENST00000399976 PCDHA6Q9UN73 950 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 PCDHA8Q9Y5H6 950 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 STK24Q9Y6E0 443 aa8.61□□□□□ -1.03
USP16-204ENST00000399976 LTBP2Q14767 1821 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms