RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 SLC37A4O43826 429 aa17.69■□□□□ 0.42
ATP2A3-206ENST00000397043 TM4SF1P30408 202 aa17.69■□□□□ 0.42
ATP2A3-206ENST00000397043 SLC16A2P36021 539 aa17.69■□□□□ 0.42
ATP2A3-206ENST00000397043 USP14P54578 494 aa17.69■□□□□ 0.42
ATP2A3-206ENST00000397043 NELFCDQ8IXH7 590 aa17.69■□□□□ 0.42
ATP2A3-206ENST00000397043 C10orf67Q8IYJ2 551 aa17.69■□□□□ 0.42
ATP2A3-206ENST00000397043 FLT1P17948 1338 aa17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 ANKRD65E5RJM6 399 aa17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 TULP1O00294 542 aaPredicted RBP17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 EIF4A3P38919 411 aaKnown RBP17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 IRX5P78411 483 aaPredicted RBP17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 SLC7A5Q01650 507 aa17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 CKAP4Q07065 602 aaKnown RBP17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 KRT79Q5XKE5 535 aa17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 CCDC70Q6NSX1 233 aa17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 TMED8Q6PL24 325 aaPredicted RBP17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 LARP4BQ92615 738 aaKnown RBP17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 NDST4Q9H3R1 872 aa17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 EHD2Q9NZN4 543 aa17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 RASSF10A6NK89 507 aa17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 PDE2AO00408 941 aaPredicted RBP17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 MYL1P05976 194 aa17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 TUBB4BP68371 445 aa17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 MAP9Q49MG5 647 aa17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 NUDT12Q9BQG2 462 aa17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 CWC15Q9P013 229 aaKnown RBP17.68■□□□□ 0.42
ATP2A3-206ENST00000397043 PRPHP41219 470 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 RNASE9P60153 205 aaKnown RBP17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 GPSM2P81274 684 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 GRAPQ13588 217 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 CCDC40Q4G0X9 1142 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 GRAPLQ8TC17 118 aaPredicted RBP17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 LZTS2Q9BRK4 669 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 MMTAG2Q9BU76 263 aaKnown RBP17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 CD209Q9NNX6 404 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 CAPN6Q9Y6Q1 641 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 KDM4FA0A1W2PPD8 638 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 TRAF5O00463 557 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 NCK2O43639 380 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 RNF40O75150 1001 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 TACC1O75410 805 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 MIIPQ5JXC2 388 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 TRAPPC3LQ5T215 181 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 RTFDC1Q9BY42 306 aaPredicted RBP17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 COL14A1Q05707 1796 aaKnown RBP17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 FAM170AA1A519 330 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 SLURP2P0DP57 97 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 ADCY7P51828 1080 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 KIF11P52732 1056 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 VWA3BQ502W6 1294 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 DPP8Q6V1X1 898 aaPredicted RBP17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 DAGLBQ8NCG7 672 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 CUEDC2Q9H467 287 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 RSPH14Q9UHP6 348 aa17.67■□□□□ 0.42
ATP2A3-206ENST00000397043 LRRC53A6NM62 1247 aa17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 GTF2IP78347 998 aa17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 EZH2Q15910 746 aaKnown RBP17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 DNAJC21Q5F1R6 531 aaKnown RBP17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 TMC4Q7Z404 712 aa17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 DDX12PQ92771 950 aa17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 C7orf25Q9BPX7 421 aa17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 SPZ1Q9BXG8 430 aa17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 LEMD3Q9Y2U8 911 aa17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 EIF3CLB5ME19 914 aaKnown RBP17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 ZNF263O14978 683 aa17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 MYBL2P10244 700 aa17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 ACTN2P35609 894 aa17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 MAGEA1P43355 309 aa17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 VAV2P52735 878 aa17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 RASSF7Q02833 373 aa17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 NFRKBQ6P4R8 1299 aa17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 FAM196AQ6ZSG2 479 aa17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 COG1Q8WTW3 980 aa17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 EIF3CQ99613 913 aaKnown RBP17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 RAB34Q9BZG1 259 aa17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 PCDHA13Q9Y5I0 950 aa17.66■□□□□ 0.42
ATP2A3-206ENST00000397043 PHLPP1O60346 1717 aa17.65■□□□□ 0.42
ATP2A3-206ENST00000397043 KRT18P05783 430 aaKnown RBP17.65■□□□□ 0.42
ATP2A3-206ENST00000397043 GFPT1Q06210 699 aaPredicted RBP17.65■□□□□ 0.42
ATP2A3-206ENST00000397043 GRB10Q13322 594 aa17.65■□□□□ 0.42
ATP2A3-206ENST00000397043 CCDC170Q8IYT3 715 aa17.65■□□□□ 0.42
ATP2A3-206ENST00000397043 NEDD1Q8NHV4 660 aa17.65■□□□□ 0.42
ATP2A3-206ENST00000397043 ARHGAP20Q9P2F6 1191 aa17.65■□□□□ 0.42
ATP2A3-206ENST00000397043 PTPROQ16827 1216 aa17.65■□□□□ 0.42
ATP2A3-206ENST00000397043 FOXR1Q6PIV2 292 aa17.65■□□□□ 0.42
ATP2A3-206ENST00000397043 RETREG2Q8NC44 543 aa17.65■□□□□ 0.42
ATP2A3-206ENST00000397043 GGA1Q9UJY5 639 aa17.65■□□□□ 0.42
ATP2A3-206ENST00000397043 MEA1Q16626 185 aa17.65■□□□□ 0.42
ATP2A3-206ENST00000397043 SND1Q7KZF4 910 aaKnown RBP eCLIP17.65■□□□□ 0.426e-6■□□□□ 9.2
ATP2A3-206ENST00000397043 KCNK18Q7Z418 384 aa17.65■□□□□ 0.42
ATP2A3-206ENST00000397043 FAM71BQ8TC56 605 aa17.65■□□□□ 0.42
ATP2A3-206ENST00000397043 HDAC7Q8WUI4 952 aa17.65■□□□□ 0.42
ATP2A3-206ENST00000397043 ANKS1AQ92625 1134 aa17.65■□□□□ 0.42
ATP2A3-206ENST00000397043 A0A1B0GUL6 1792 aa17.64■□□□□ 0.42
ATP2A3-206ENST00000397043 NHSL1Q5SYE7 1610 aa17.64■□□□□ 0.41
ATP2A3-206ENST00000397043 EPS15P42566 896 aa17.64■□□□□ 0.41
ATP2A3-206ENST00000397043 APBA1Q02410 837 aa17.64■□□□□ 0.41
ATP2A3-206ENST00000397043 TTBK2Q6IQ55 1244 aa17.64■□□□□ 0.41
ATP2A3-206ENST00000397043 KCTD1Q719H9 257 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms