RNA–Protein interactions for RNA: ENST00000393829.6

ATP6V0A1-203, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 1 (best) BASIC

Gene ATP6V0A1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-203ENST00000393829 SMARCC1Q92922 1105 aaPredicted RBP16.19■□□□□ 0.18
ATP6V0A1-203ENST00000393829 DMGDHQ9UI17 866 aaKnown RBP16.19■□□□□ 0.18
ATP6V0A1-203ENST00000393829 USO1O60763 962 aaKnown RBP16.18■□□□□ 0.18
ATP6V0A1-203ENST00000393829 AMPD3Q01432 767 aa16.18■□□□□ 0.18
ATP6V0A1-203ENST00000393829 GRIK5Q16478 980 aa16.18■□□□□ 0.18
ATP6V0A1-203ENST00000393829 ZNF572Q7Z3I7 529 aaPredicted RBP16.18■□□□□ 0.18
ATP6V0A1-203ENST00000393829 SLC51AQ86UW1 340 aa16.18■□□□□ 0.18
ATP6V0A1-203ENST00000393829 TGFBRAP1Q8WUH2 860 aa16.18■□□□□ 0.18
ATP6V0A1-203ENST00000393829 LRRC1Q9BTT6 524 aa16.18■□□□□ 0.18
ATP6V0A1-203ENST00000393829 SPZ1Q9BXG8 430 aa16.18■□□□□ 0.18
ATP6V0A1-203ENST00000393829 NDST4Q9H3R1 872 aa16.18■□□□□ 0.18
ATP6V0A1-203ENST00000393829 FAM184BQ9ULE4 1060 aa16.18■□□□□ 0.18
ATP6V0A1-203ENST00000393829 NT5C2P49902 561 aa16.18■□□□□ 0.18
ATP6V0A1-203ENST00000393829 MRPS25P82663 173 aaKnown RBP16.18■□□□□ 0.18
ATP6V0A1-203ENST00000393829 MAPK8IP2Q13387 824 aaPredicted RBP16.18■□□□□ 0.18
ATP6V0A1-203ENST00000393829 POTEDQ86YR6 584 aa16.18■□□□□ 0.18
ATP6V0A1-203ENST00000393829 NLRP3Q96P20 1036 aa16.18■□□□□ 0.18
ATP6V0A1-203ENST00000393829 LZTS2Q9BRK4 669 aa16.18■□□□□ 0.18
ATP6V0A1-203ENST00000393829 BLOC1S4Q9NUP1 217 aa16.18■□□□□ 0.18
ATP6V0A1-203ENST00000393829 NAV1Q8NEY1 1877 aa16.18■□□□□ 0.18
ATP6V0A1-203ENST00000393829 MYMKA6NI61 221 aa16.17■□□□□ 0.18
ATP6V0A1-203ENST00000393829 PPFIA4O75335 1185 aa16.17■□□□□ 0.18
ATP6V0A1-203ENST00000393829 NFRKBQ6P4R8 1299 aa16.17■□□□□ 0.18
ATP6V0A1-203ENST00000393829 TBCKQ8TEA7 893 aa16.17■□□□□ 0.18
ATP6V0A1-203ENST00000393829 SMARCAL1Q9NZC9 954 aa16.17■□□□□ 0.18
ATP6V0A1-203ENST00000393829 SAP30BPQ9UHR5 308 aaKnown RBP16.17■□□□□ 0.18
ATP6V0A1-203ENST00000393829 GOLGA6BA6NDN3 693 aa16.17■□□□□ 0.18
ATP6V0A1-203ENST00000393829 LCA5LO95447 670 aa16.17■□□□□ 0.18
ATP6V0A1-203ENST00000393829 LDHBP07195 334 aaKnown RBP16.17■□□□□ 0.18
ATP6V0A1-203ENST00000393829 GRB10Q13322 594 aa16.17■□□□□ 0.18
ATP6V0A1-203ENST00000393829 SPATA4Q8NEY3 305 aa16.17■□□□□ 0.18
ATP6V0A1-203ENST00000393829 IQCDQ96DY2 449 aa16.17■□□□□ 0.18
ATP6V0A1-203ENST00000393829 RRP36Q96EU6 259 aaKnown RBP16.17■□□□□ 0.18
ATP6V0A1-203ENST00000393829 OSBPL9Q96SU4 736 aa16.17■□□□□ 0.18
ATP6V0A1-203ENST00000393829 C6orf50Q9HD87 102 aa16.17■□□□□ 0.18
ATP6V0A1-203ENST00000393829 ITIH3Q06033 890 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 USP17L2Q6R6M4 530 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 SND1Q7KZF4 910 aaKnown RBP eCLIP16.16■□□□□ 0.182e-6■■■■□ 19.6
ATP6V0A1-203ENST00000393829 AMOTL1Q8IY63 956 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 CALML4Q96GE6 196 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 PSMB7Q99436 277 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 MMRN2Q9H8L6 949 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 EHD2Q9NZN4 543 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 SALL4Q9UJQ4 1053 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 LRRC53A6NM62 1247 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 ANKRD65E5RJM6 399 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 PRLRP16471 622 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 CXCR5P32302 372 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 TXKP42681 527 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 CCDC70Q6NSX1 233 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 SV2BQ7L1I2 683 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 MAPKAPK5Q8IW41 473 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 PNMA5Q96PV4 448 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 BIN2Q9UBW5 565 aaPredicted RBP16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 AKR1B10O60218 316 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 SHOX2O60902 331 aaPredicted RBP16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 GNA11P29992 359 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 MATR3P43243 847 aaKnown RBP eCLIP16.16■□□□□ 0.182e-7■■□□□ 14.1
ATP6V0A1-203ENST00000393829 SLC7A5Q01650 507 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 ATP2B2Q01814 1243 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 MAN2A1Q16706 1144 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 RRAGAQ7L523 313 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 DEF6Q9H4E7 631 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 TMEM260Q9NX78 707 aa16.16■□□□□ 0.18
ATP6V0A1-203ENST00000393829 SNED1Q8TER0 1413 aa16.15■□□□□ 0.18
ATP6V0A1-203ENST00000393829 ERCC3P19447 782 aa16.15■□□□□ 0.18
ATP6V0A1-203ENST00000393829 UNC13DQ70J99 1090 aa16.15■□□□□ 0.18
ATP6V0A1-203ENST00000393829 DYMQ7RTS9 669 aa16.15■□□□□ 0.18
ATP6V0A1-203ENST00000393829 FAM76AQ8TAV0 307 aa16.15■□□□□ 0.18
ATP6V0A1-203ENST00000393829 BAP1Q92560 729 aa16.15■□□□□ 0.18
ATP6V0A1-203ENST00000393829 VAT1LQ9HCJ6 419 aa16.15■□□□□ 0.18
ATP6V0A1-203ENST00000393829 GOLGA6CA6NDK9 693 aa16.15■□□□□ 0.18
ATP6V0A1-203ENST00000393829 NCK2O43639 380 aa16.15■□□□□ 0.18
ATP6V0A1-203ENST00000393829 GOLGA6DP0CG33 693 aa16.15■□□□□ 0.18
ATP6V0A1-203ENST00000393829 NBPF5PQ86XG9 351 aaPredicted RBP16.15■□□□□ 0.18
ATP6V0A1-203ENST00000393829 GOLGA6AQ9NYA3 693 aa16.15■□□□□ 0.18
ATP6V0A1-203ENST00000393829 SRP68Q9UHB9 627 aaKnown RBP16.15■□□□□ 0.18
ATP6V0A1-203ENST00000393829 HYOU1Q9Y4L1 999 aa16.15■□□□□ 0.18
ATP6V0A1-203ENST00000393829 SBF2Q86WG5 1849 aa16.15■□□□□ 0.18
ATP6V0A1-203ENST00000393829 TM4SF1P30408 202 aa16.14■□□□□ 0.17
ATP6V0A1-203ENST00000393829 ANKRD13CQ8N6S4 541 aa16.14■□□□□ 0.17
ATP6V0A1-203ENST00000393829 MTMR9Q96QG7 549 aa16.14■□□□□ 0.17
ATP6V0A1-203ENST00000393829 PIGSQ96S52 555 aa16.14■□□□□ 0.17
ATP6V0A1-203ENST00000393829 TCP1P17987 556 aaKnown RBP16.14■□□□□ 0.17
ATP6V0A1-203ENST00000393829 MAGEA1P43355 309 aa16.14■□□□□ 0.17
ATP6V0A1-203ENST00000393829 CORO7P57737 925 aa16.14■□□□□ 0.17
ATP6V0A1-203ENST00000393829 PPP4CP60510 307 aa16.14■□□□□ 0.17
ATP6V0A1-203ENST00000393829 HAUS3Q68CZ6 603 aa16.14■□□□□ 0.17
ATP6V0A1-203ENST00000393829 LRRC55Q6ZSA7 311 aa16.14■□□□□ 0.17
ATP6V0A1-203ENST00000393829 EYA3Q99504 573 aa16.14■□□□□ 0.17
ATP6V0A1-203ENST00000393829 NYXQ9GZU5 481 aa16.14■□□□□ 0.17
ATP6V0A1-203ENST00000393829 PVALEFA0A1B0GWK0 134 aa16.13■□□□□ 0.17
ATP6V0A1-203ENST00000393829 BAG3O95817 575 aa16.13■□□□□ 0.17
ATP6V0A1-203ENST00000393829 MAGEA9P43362 315 aa16.13■□□□□ 0.17
ATP6V0A1-203ENST00000393829 ASTE1Q2TB18 679 aaPredicted RBP16.13■□□□□ 0.17
ATP6V0A1-203ENST00000393829 SOGA3Q5TF21 947 aa16.13■□□□□ 0.17
ATP6V0A1-203ENST00000393829 CCDC84Q86UT8 332 aaPredicted RBP16.13■□□□□ 0.17
ATP6V0A1-203ENST00000393829 REXO1Q8N1G1 1221 aaKnown RBP16.13■□□□□ 0.17
ATP6V0A1-203ENST00000393829 GUF1Q8N442 669 aaKnown RBP16.13■□□□□ 0.17
ATP6V0A1-203ENST00000393829 CCDC155Q8N6L0 562 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms