RNA–Protein interactions for RNA: ENST00000390353.2

TRBV6-1-201, Transcript of T cell receptor beta variable 6-1, humanhuman

APPRIS P1 BASIC

Gene TRBV6-1, Length 401 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1-201ENST00000390353 PRDM12Q9H4Q4 367 aa9.72□□□□□ -0.85
TRBV6-1-201ENST00000390353 THEGQ9P2T0 379 aa9.72□□□□□ -0.85
TRBV6-1-201ENST00000390353 MRPL11Q9Y3B7 192 aaKnown RBP9.72□□□□□ -0.85
TRBV6-1-201ENST00000390353 GRIN2DO15399 1336 aa9.72□□□□□ -0.85
TRBV6-1-201ENST00000390353 UNC80Q8N2C7 3258 aa9.72□□□□□ -0.85
TRBV6-1-201ENST00000390353 PLXNA1Q9UIW2 1896 aa9.72□□□□□ -0.85
TRBV6-1-201ENST00000390353 GTPBP6O43824 516 aaPredicted RBP9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 KDM4AO75164 1064 aa9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 BAIAP3O94812 1187 aa9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 GH1P01241 217 aa9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 PARP1P09874 1014 aaKnown RBP9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 CASTP20810 708 aaKnown RBP9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 IGFBP4P22692 258 aa9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 PBX2P40425 430 aa9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 MRPS5P82675 430 aaKnown RBP9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 CDC37Q16543 378 aaPredicted RBP9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 NBPF20Q3BBV1 942 aa9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 USH1GQ495M9 461 aa9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 TMEM67Q5HYA8 995 aa9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 RASGRP2Q7LDG7 609 aa9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 TBC1D10CQ8IV04 446 aa9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 CAGE1Q8TC20 777 aa9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 ANKS1AQ92625 1134 aa9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 PURBQ96QR8 312 aaKnown RBP9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 SLC9A7Q96T83 725 aa9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 DSCC1Q9BVC3 393 aa9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 KATNAL1Q9BW62 490 aa9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 WNT8AQ9H1J5 351 aa9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 TRMT13Q9NUP7 481 aaKnown RBP9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 MAP3K20Q9NYL2 800 aaKnown RBP9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 CXXC1Q9P0U4 656 aaPredicted RBP9.71□□□□□ -0.86
TRBV6-1-201ENST00000390353 SMCHD1A6NHR9 2005 aa9.7□□□□□ -0.86
TRBV6-1-201ENST00000390353 GRXCR1A8MXD5 290 aa9.7□□□□□ -0.86
TRBV6-1-201ENST00000390353 EIF3JO75822 258 aaKnown RBP9.7□□□□□ -0.86
TRBV6-1-201ENST00000390353 NUCB1Q02818 461 aa9.7□□□□□ -0.86
TRBV6-1-201ENST00000390353 TRDNQ13061 729 aa9.7□□□□□ -0.86
TRBV6-1-201ENST00000390353 DGKDQ16760 1214 aa9.7□□□□□ -0.86
TRBV6-1-201ENST00000390353 ARHGEF16Q5VV41 709 aa9.7□□□□□ -0.86
TRBV6-1-201ENST00000390353 KCNV1Q6PIU1 500 aa9.7□□□□□ -0.86
TRBV6-1-201ENST00000390353 CWC27Q6UX04 472 aaKnown RBP9.7□□□□□ -0.86
TRBV6-1-201ENST00000390353 FBXO11Q86XK2 927 aa9.7□□□□□ -0.86
TRBV6-1-201ENST00000390353 SAMD3Q8N6K7 520 aa9.7□□□□□ -0.86
TRBV6-1-201ENST00000390353 AFAP1L1Q8TED9 768 aa9.7□□□□□ -0.86
TRBV6-1-201ENST00000390353 RMDN3Q96TC7 470 aa9.7□□□□□ -0.86
TRBV6-1-201ENST00000390353 FTOQ9C0B1 505 aaKnown RBP eCLIP9.7□□□□□ -0.86
TRBV6-1-201ENST00000390353 NKX2-4Q9H2Z4 354 aa9.7□□□□□ -0.86
TRBV6-1-201ENST00000390353 ZNFX1Q9P2E3 1918 aaKnown RBP9.7□□□□□ -0.86
TRBV6-1-201ENST00000390353 TNFRSF10AO00220 468 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 EFCAB14O75071 495 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 GOLGA8HP0CJ92 632 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 CYP2C9P11712 490 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 NEDD4P46934 1319 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 KCNJ6P48051 423 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 LAMC2Q13753 1193 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 SART3Q15020 963 aaKnown RBP9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 PTGISQ16647 500 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 UMODL1Q5DID0 1318 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 IFIT1BQ5T764 474 aaKnown RBP9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 B4GALNT3Q6L9W6 998 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 SEPT14Q6ZU15 432 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 DEFB128Q7Z7B8 93 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 SESTD1Q86VW0 696 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 PLEKHM2Q8IWE5 1019 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 ADGRF4Q8IZF3 695 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 C7orf31Q8N865 590 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 RUFY2Q8WXA3 655 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 PPM1EQ8WY54 764 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 EMID1Q96A84 441 aaPredicted RBP9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 SCLYQ96I15 445 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 ASB2Q96Q27 587 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 ZKSCAN3Q9BRR0 538 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 AMNQ9BXJ7 453 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 PRDM6Q9NQX0 595 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 MYH4Q9Y623 1939 aa9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 DDX49Q9Y6V7 483 aaKnown RBP9.69□□□□□ -0.86
TRBV6-1-201ENST00000390353 BDP1A6H8Y1 2624 aa9.68□□□□□ -0.86
TRBV6-1-201ENST00000390353 ERICH2A1L162 156 aa9.68□□□□□ -0.86
TRBV6-1-201ENST00000390353 IQCF3P0C7M6 154 aa9.68□□□□□ -0.86
TRBV6-1-201ENST00000390353 SELPP16109 830 aa9.68□□□□□ -0.86
TRBV6-1-201ENST00000390353 CHMP4BP1P59074 171 aa9.68□□□□□ -0.86
TRBV6-1-201ENST00000390353 QRICH1Q2TAL8 776 aa9.68□□□□□ -0.86
TRBV6-1-201ENST00000390353 CCDC62Q6P9F0 684 aa9.68□□□□□ -0.86
TRBV6-1-201ENST00000390353 ENAHQ8N8S7 591 aaPredicted RBP9.68□□□□□ -0.86
TRBV6-1-201ENST00000390353 SYTL5Q8TDW5 730 aaPredicted RBP9.68□□□□□ -0.86
TRBV6-1-201ENST00000390353 AFG1LQ8WV93 481 aa9.68□□□□□ -0.86
TRBV6-1-201ENST00000390353 UBA5Q9GZZ9 404 aa9.68□□□□□ -0.86
TRBV6-1-201ENST00000390353 YBX2Q9Y2T7 364 aaKnown RBP9.68□□□□□ -0.86
TRBV6-1-201ENST00000390353 MRVI1Q9Y6F6 885 aa9.68□□□□□ -0.86
TRBV6-1-201ENST00000390353 B4E1Z4 1266 aa9.67□□□□□ -0.86
TRBV6-1-201ENST00000390353 ZBTB5O15062 677 aa9.67□□□□□ -0.86
TRBV6-1-201ENST00000390353 PPFIA4O75335 1185 aa9.67□□□□□ -0.86
TRBV6-1-201ENST00000390353 MMP3P08254 477 aa9.67□□□□□ -0.86
TRBV6-1-201ENST00000390353 TGFB3P10600 412 aa9.67□□□□□ -0.86
TRBV6-1-201ENST00000390353 TMEM63BQ5T3F8 832 aa9.67□□□□□ -0.86
TRBV6-1-201ENST00000390353 HERC6Q8IVU3 1022 aa9.67□□□□□ -0.86
TRBV6-1-201ENST00000390353 DHX37Q8IY37 1157 aaKnown RBP9.67□□□□□ -0.86
TRBV6-1-201ENST00000390353 USP38Q8NB14 1042 aa9.67□□□□□ -0.86
TRBV6-1-201ENST00000390353 PPTC7Q8NI37 304 aa9.67□□□□□ -0.86
TRBV6-1-201ENST00000390353 ZBED2Q9BTP6 218 aa9.67□□□□□ -0.86
TRBV6-1-201ENST00000390353 ZSWIM5Q9P217 1185 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms