RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 R3HCC1Q9Y3T6 440 aaKnown RBP15.94■□□□□ 0.14
LDB3-204ENST00000372066 MYH4Q9Y623 1939 aa15.94■□□□□ 0.14
LDB3-204ENST00000372066 A0A087WWV3 80 aa15.93■□□□□ 0.14
LDB3-204ENST00000372066 FAM205CA6NFA0 338 aa15.93■□□□□ 0.14
LDB3-204ENST00000372066 LAD1O00515 517 aa15.93■□□□□ 0.14
LDB3-204ENST00000372066 NRDCO43847 1150 aa15.93■□□□□ 0.14
LDB3-204ENST00000372066 PARP1P09874 1014 aaKnown RBP15.93■□□□□ 0.14
LDB3-204ENST00000372066 GRIN1Q05586 938 aa15.93■□□□□ 0.14
LDB3-204ENST00000372066 MORC3Q14149 939 aa15.93■□□□□ 0.14
LDB3-204ENST00000372066 CHRDL2Q6WN34 429 aa15.93■□□□□ 0.14
LDB3-204ENST00000372066 SLC44A5Q8NCS7 719 aa15.93■□□□□ 0.14
LDB3-204ENST00000372066 ZNF280CQ8ND82 737 aa15.93■□□□□ 0.14
LDB3-204ENST00000372066 COA7Q96BR5 231 aa15.93■□□□□ 0.14
LDB3-204ENST00000372066 PNMA3Q9UL41 463 aa15.93■□□□□ 0.14
LDB3-204ENST00000372066 CCDC194A0A1B0GVG4 234 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 M0R2N6 131 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 SGPL1O95470 568 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 TFRCP02786 760 aaKnown RBP15.92■□□□□ 0.14
LDB3-204ENST00000372066 INHAP05111 366 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 LONP1P36776 959 aaKnown RBP15.92■□□□□ 0.14
LDB3-204ENST00000372066 GABPAQ06546 454 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 PTGDRQ13258 359 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 ORC2Q13416 577 aaPredicted RBP15.92■□□□□ 0.14
LDB3-204ENST00000372066 IRF5Q13568 498 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 PIK3AP1Q6ZUJ8 805 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 SH3RF1Q7Z6J0 888 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 UBE2Q1Q7Z7E8 422 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 LRRC8AQ8IWT6 810 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 STAG2Q8N3U4 1231 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 PROCA1Q8NCQ7 364 aaPredicted RBP15.92■□□□□ 0.14
LDB3-204ENST00000372066 PXYLP1Q8TE99 480 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 NRBP1Q9UHY1 535 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 MAN1B1Q9UKM7 699 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 USP17L5A8MUK1 530 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 KLRF2D3W0D1 207 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 STXBP3O00186 592 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 FARP2O94887 1054 aaPredicted RBP15.92■□□□□ 0.14
LDB3-204ENST00000372066 ERCC5P28715 1186 aaPredicted RBP15.92■□□□□ 0.14
LDB3-204ENST00000372066 CAP2P40123 477 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 TXLNAP40222 546 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 ZNF174Q15697 407 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 CCDC144BQ3MJ40 725 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 SPECC1Q5M775 1068 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 FOXP4Q8IVH2 680 aaPredicted RBP15.92■□□□□ 0.14
LDB3-204ENST00000372066 CACTINQ8WUQ7 758 aaKnown RBP15.92■□□□□ 0.14
LDB3-204ENST00000372066 SYMPKQ92797 1274 aaKnown RBP15.92■□□□□ 0.14
LDB3-204ENST00000372066 GSDMAQ96QA5 445 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 XPO4Q9C0E2 1151 aaKnown RBP15.92■□□□□ 0.14
LDB3-204ENST00000372066 NR2E3Q9Y5X4 410 aa15.92■□□□□ 0.14
LDB3-204ENST00000372066 ESYT2A0FGR8 921 aa15.91■□□□□ 0.14
LDB3-204ENST00000372066 KCNJ6P48051 423 aa15.91■□□□□ 0.14
LDB3-204ENST00000372066 HMGCS2P54868 508 aa15.91■□□□□ 0.14
LDB3-204ENST00000372066 FANCCQ00597 558 aa15.91■□□□□ 0.14
LDB3-204ENST00000372066 SEMA3FQ13275 785 aa15.91■□□□□ 0.14
LDB3-204ENST00000372066 PABPC4Q13310 644 aaKnown RBP eCLIP15.91■□□□□ 0.14
LDB3-204ENST00000372066 RRP1BQ14684 758 aaKnown RBP15.91■□□□□ 0.14
LDB3-204ENST00000372066 FAM110CQ1W6H9 321 aa15.91■□□□□ 0.14
LDB3-204ENST00000372066 ASPRV1Q53RT3 343 aa15.91■□□□□ 0.14
LDB3-204ENST00000372066 WWC2Q6AWC2 1192 aa15.91■□□□□ 0.14
LDB3-204ENST00000372066 KRT25Q7Z3Z0 450 aa15.91■□□□□ 0.14
LDB3-204ENST00000372066 IQUBQ8NA54 791 aa15.91■□□□□ 0.14
LDB3-204ENST00000372066 ENOX1Q8TC92 643 aaKnown RBP15.91■□□□□ 0.14
LDB3-204ENST00000372066 RRP36Q96EU6 259 aaKnown RBP15.91■□□□□ 0.14
LDB3-204ENST00000372066 DEFB118Q96PH6 123 aa15.91■□□□□ 0.14
LDB3-204ENST00000372066 ZMYND12Q9H0C1 365 aa15.91■□□□□ 0.14
LDB3-204ENST00000372066 KCND1Q9NSA2 647 aa15.91■□□□□ 0.14
LDB3-204ENST00000372066 IFNKQ9P0W0 207 aa15.91■□□□□ 0.14
LDB3-204ENST00000372066 PI4KBQ9UBF8 816 aa15.91■□□□□ 0.14
LDB3-204ENST00000372066 CYTH3O43739 400 aa15.9■□□□□ 0.14
LDB3-204ENST00000372066 HLA-DOAP06340 250 aa15.9■□□□□ 0.14
LDB3-204ENST00000372066 GNA11P29992 359 aa15.9■□□□□ 0.14
LDB3-204ENST00000372066 PRPHP41219 470 aa15.9■□□□□ 0.14
LDB3-204ENST00000372066 GCLCP48506 637 aaPredicted RBP15.9■□□□□ 0.14
LDB3-204ENST00000372066 DHX58Q96C10 678 aa15.9■□□□□ 0.14
LDB3-204ENST00000372066 EHD4Q9H223 541 aa15.9■□□□□ 0.14
LDB3-204ENST00000372066 AS3MTQ9HBK9 375 aa15.9■□□□□ 0.14
LDB3-204ENST00000372066 SEC63Q9UGP8 760 aaKnown RBP15.9■□□□□ 0.14
LDB3-204ENST00000372066 HERC5Q9UII4 1024 aaKnown RBP15.9■□□□□ 0.14
LDB3-204ENST00000372066 IGKV6D-41A0A0C4DH26 115 aa15.89■□□□□ 0.13
LDB3-204ENST00000372066 VWA3AA6NCI4 1184 aa15.89■□□□□ 0.13
LDB3-204ENST00000372066 HEATR3Q7Z4Q2 680 aa15.89■□□□□ 0.13
LDB3-204ENST00000372066 PDILTQ8N807 584 aa15.89■□□□□ 0.13
LDB3-204ENST00000372066 GPKOWQ92917 476 aaPredicted RBP eCLIP15.89■□□□□ 0.13
LDB3-204ENST00000372066 CEP95Q96GE4 821 aa15.89■□□□□ 0.13
LDB3-204ENST00000372066 DHX36Q9H2U1 1008 aaKnown RBP15.89■□□□□ 0.13
LDB3-204ENST00000372066 C6orf50Q9HD87 102 aa15.89■□□□□ 0.13
LDB3-204ENST00000372066 SERPINB13Q9UIV8 391 aa15.89■□□□□ 0.13
LDB3-204ENST00000372066 SIPA1L1O43166 1804 aa15.89■□□□□ 0.13
LDB3-204ENST00000372066 PRR29P0C7W0 189 aa15.88■□□□□ 0.13
LDB3-204ENST00000372066 LRMPQ12912 555 aa15.88■□□□□ 0.13
LDB3-204ENST00000372066 PAGE5Q96GU1 130 aa15.88■□□□□ 0.13
LDB3-204ENST00000372066 EPSTI1Q96J88 318 aa15.88■□□□□ 0.13
LDB3-204ENST00000372066 ASCC2Q9H1I8 757 aaPredicted RBP15.88■□□□□ 0.13
LDB3-204ENST00000372066 HSD3B7Q9H2F3 369 aa15.88■□□□□ 0.13
LDB3-204ENST00000372066 MTMR4Q9NYA4 1195 aa15.88■□□□□ 0.13
LDB3-204ENST00000372066 PCDHA6Q9UN73 950 aa15.88■□□□□ 0.13
LDB3-204ENST00000372066 PCDHA8Q9Y5H6 950 aa15.88■□□□□ 0.13
LDB3-204ENST00000372066 WNT7AO00755 349 aa15.87■□□□□ 0.13
LDB3-204ENST00000372066 DYNC1I1O14576 645 aa15.87■□□□□ 0.13
LDB3-204ENST00000372066 SERPINC1P01008 464 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms