RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 NKIRAS2Q9NYR9 191 aa4.52□□□□□ -1.69
MCF2-203ENST00000370576 LRRFIP2Q9Y608 721 aaKnown RBP4.52□□□□□ -1.69
MCF2-203ENST00000370576 MYH7BA7E2Y1 1941 aa4.52□□□□□ -1.69
MCF2-203ENST00000370576 M0R2N6 131 aa4.52□□□□□ -1.69
MCF2-203ENST00000370576 GABRDO14764 452 aa4.52□□□□□ -1.69
MCF2-203ENST00000370576 TMCC2O75069 709 aa4.52□□□□□ -1.69
MCF2-203ENST00000370576 COL9A1P20849 921 aa4.52□□□□□ -1.69
MCF2-203ENST00000370576 ZNF131P52739 623 aa4.52□□□□□ -1.69
MCF2-203ENST00000370576 CCDC158Q5M9N0 1113 aa4.52□□□□□ -1.69
MCF2-203ENST00000370576 ARMC4Q5T2S8 1044 aa4.52□□□□□ -1.69
MCF2-203ENST00000370576 LMBRD2Q68DH5 695 aaPredicted RBP4.52□□□□□ -1.69
MCF2-203ENST00000370576 HIBCHQ6NVY1 386 aaPredicted RBP4.52□□□□□ -1.69
MCF2-203ENST00000370576 VPS37DQ86XT2 251 aa4.52□□□□□ -1.69
MCF2-203ENST00000370576 FAM26EQ8N5C1 309 aa4.52□□□□□ -1.69
MCF2-203ENST00000370576 ACRBPQ8NEB7 543 aa4.52□□□□□ -1.69
MCF2-203ENST00000370576 IPCEF1Q8WWN9 437 aaPredicted RBP4.52□□□□□ -1.69
MCF2-203ENST00000370576 ANKEF1Q9NU02 776 aa4.52□□□□□ -1.69
MCF2-203ENST00000370576 PIH1D1Q9NWS0 290 aaKnown RBP4.52□□□□□ -1.69
MCF2-203ENST00000370576 ARHGAP28Q9P2N2 729 aa4.52□□□□□ -1.69
MCF2-203ENST00000370576 ADAMTS1Q9UHI8 967 aa4.52□□□□□ -1.69
MCF2-203ENST00000370576 GTF3C4Q9UKN8 822 aa4.52□□□□□ -1.69
MCF2-203ENST00000370576 TRPC5Q9UL62 973 aaPredicted RBP4.52□□□□□ -1.69
MCF2-203ENST00000370576 PHTF1Q9UMS5 762 aa4.52□□□□□ -1.69
MCF2-203ENST00000370576 TNKSO95271 1327 aa4.52□□□□□ -1.69
MCF2-203ENST00000370576 KLHL33A6NCF5 533 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 PLOD2O00469 737 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 MICAL2O94851 1124 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 SDSP20132 328 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 BRD3Q15059 726 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 SWSAP1Q6NVH7 229 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 ITPRIPQ8IWB1 547 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 TTLL11Q8NHH1 800 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 LRRCC1Q9C099 1032 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 TCHHQ07283 1943 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 PNPLA7Q6ZV29 1317 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 KATNA1O75449 491 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 HOXD12P35452 270 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 LAPTM5Q13571 262 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 DDR2Q16832 855 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 IRGCQ6NXR0 463 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 TTLL7Q6ZT98 887 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 TOM1L2Q6ZVM7 507 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 COPS6Q7L5N1 327 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 HS2ST1Q7LGA3 356 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 SH3RF1Q7Z6J0 888 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 FBF1Q8TES7 1133 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 MAP4K1Q92918 833 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 MOGAT1Q96PD6 335 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 ATP6V0A4Q9HBG4 840 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 EPB41L4AQ9HCS5 686 aaPredicted RBP4.51□□□□□ -1.69
MCF2-203ENST00000370576 LRRC4BQ9NT99 713 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 TMOD3Q9NYL9 352 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 ISY1Q9ULR0 285 aaKnown RBP4.51□□□□□ -1.69
MCF2-203ENST00000370576 TTLL3Q9Y4R7 772 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 PCDHGA11Q9Y5H2 935 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 MROH5Q6ZUA9 1318 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 A0A0B4J203 849 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 F6X3S4 739 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 KIF1CO43896 1103 aaKnown RBP4.51□□□□□ -1.69
MCF2-203ENST00000370576 CAPNS1P04632 268 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 SKIP12755 728 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 LPOP22079 712 aaPredicted RBP4.51□□□□□ -1.69
MCF2-203ENST00000370576 CCDC15Q0P6D6 951 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 APOBRQ0VD83 1088 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 PRKG2Q13237 762 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 TRIM29Q14134 588 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 TAF1CQ15572 869 aaPredicted RBP4.51□□□□□ -1.69
MCF2-203ENST00000370576 COBLL1Q53SF7 1204 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 AGAP9Q5VTM2 703 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 ALG1LQ6GMV1 187 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 XRRA1Q6P2D8 792 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 FIP1L1Q6UN15 594 aaKnown RBP4.51□□□□□ -1.69
MCF2-203ENST00000370576 BNC2Q6ZN30 1099 aaPredicted RBP4.51□□□□□ -1.69
MCF2-203ENST00000370576 MICALL2Q8IY33 904 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 KCNN1Q92952 543 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 VMP1Q96GC9 406 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 IL25Q9H293 177 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 PLSCR4Q9NRQ2 329 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 SEL1LQ9UBV2 794 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 STRIP2Q9ULQ0 834 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 FRMPD3Q5JV73 1810 aa4.51□□□□□ -1.69
MCF2-203ENST00000370576 AFF2P51816 1311 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 PAPLNO95428 1278 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 MX1P20591 662 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 GRIK1P39086 918 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 RCAN1P53805 252 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 NLRP12P59046 1061 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 ZNF362Q5T0B9 420 aaPredicted RBP4.5□□□□□ -1.69
MCF2-203ENST00000370576 CHST15Q7LFX5 561 aaPredicted RBP4.5□□□□□ -1.69
MCF2-203ENST00000370576 NAT8LQ8N9F0 302 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 WDR66Q8TBY9 1149 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 INTS4Q96HW7 963 aaKnown RBP4.5□□□□□ -1.69
MCF2-203ENST00000370576 NTPCRQ9BSD7 190 aaKnown RBP4.5□□□□□ -1.69
MCF2-203ENST00000370576 MRIQ9BWK5 157 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 KIAA1586Q9HCI6 787 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 PTCH2Q9Y6C5 1203 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 ARID2Q68CP9 1835 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 A6NNZ2 444 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 H0Y3Z8 333 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 GREM1O60565 184 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms