RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 FAM177BA6PVY3 158 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 KLRF2D3W0D1 207 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 C6orf229H3BNL8 230 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 PODXLO00592 558 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 GAS8O95995 478 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 AFPP02771 609 aaKnown RBP8.02□□□□□ -1.13
VTA1-202ENST00000367630 FGFR2P21802 821 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 FKBP1AP62942 108 aaKnown RBP8.02□□□□□ -1.13
VTA1-202ENST00000367630 NLRX1Q86UT6 975 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 MMGT1Q8N4V1 131 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 GABPB2Q8TAK5 448 aaPredicted RBP8.02□□□□□ -1.13
VTA1-202ENST00000367630 ERGIC2Q96RQ1 377 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 MROH7-TTC4A0A0A0MT08 1334 aa8.02□□□□□ -1.13
VTA1-202ENST00000367630 GSG1L2A8MUP6 293 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 USP17L12C9JPN9 530 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 USP17L21D6R901 530 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 MYBL1P10243 752 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 PLCB4Q15147 1175 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 KRT31Q15323 416 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 TTC39CQ8N584 583 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 NEDD1Q8NHV4 660 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 AMNQ9BXJ7 453 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 CCNL1Q9UK58 526 aaPredicted RBP8.01□□□□□ -1.13
VTA1-202ENST00000367630 USH1CQ9Y6N9 552 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 ATXN2Q99700 1313 aaKnown RBP8.01□□□□□ -1.13
VTA1-202ENST00000367630 TRPM3Q9HCF6 1732 aaPredicted RBP8.01□□□□□ -1.13
VTA1-202ENST00000367630 HNRNPCL1O60812 293 aaKnown RBP8.01□□□□□ -1.13
VTA1-202ENST00000367630 INPP5BP32019 993 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 MKRN3Q13064 507 aaKnown RBP8.01□□□□□ -1.13
VTA1-202ENST00000367630 JPH2Q9BR39 696 aaPredicted RBP8.01□□□□□ -1.13
VTA1-202ENST00000367630 MKNK1Q9BUB5 465 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.01□□□□□ -1.13
VTA1-202ENST00000367630 ERICH4A6NGS2 130 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 H2AFZP0C0S5 128 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 HDLBPQ00341 1268 aaKnown RBP8.01□□□□□ -1.13
VTA1-202ENST00000367630 PTPAQ15257 358 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 NBPF9Q3BBW0 867 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 WDR44Q5JSH3 913 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 H2AFVQ71UI9 128 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 PIGBQ92521 554 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 ZKSCAN3Q9BRR0 538 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 CAPS2Q9BXY5 557 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 KCNJ14Q9UNX9 436 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 UFL1O94874 794 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 SRGNP10124 158 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 H2AFXP16104 143 aaPredicted RBP8.01□□□□□ -1.13
VTA1-202ENST00000367630 CASP14P31944 242 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 PSMC2P35998 433 aaKnown RBP8.01□□□□□ -1.13
VTA1-202ENST00000367630 LRMPQ12912 555 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 SPECC1Q5M775 1068 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 SHC4Q6S5L8 630 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 STOX1Q6ZVD7 989 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 TRIM42Q8IWZ5 723 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 NKIRAS1Q9NYS0 192 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 NEDD4P46934 1319 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 PGRMC1O00264 195 aaKnown RBP8.01□□□□□ -1.13
VTA1-202ENST00000367630 ATP5HO75947 161 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 ATP2B2Q01814 1243 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 TNFAIP1Q13829 316 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 FAM173BQ6P4H8 233 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 LCORLQ8N3X6 602 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 AS3MTQ9HBK9 375 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 SYNGAP1Q96PV0 1343 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 RBM5P52756 815 aaKnown RBP eCLIP8.01□□□□□ -1.13
VTA1-202ENST00000367630 USP14P54578 494 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 ERCC6LQ2NKX8 1250 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 SEPT11Q9NVA2 429 aaKnown RBP8.01□□□□□ -1.13
VTA1-202ENST00000367630 BCAP29Q9UHQ4 241 aa8.01□□□□□ -1.13
VTA1-202ENST00000367630 PASKQ96RG2 1323 aa8□□□□□ -1.13
VTA1-202ENST00000367630 EIF3DO15371 548 aaKnown RBP eCLIP8□□□□□ -1.13
VTA1-202ENST00000367630 LUC7L3O95232 432 aaKnown RBP8□□□□□ -1.13
VTA1-202ENST00000367630 AP3M2P53677 418 aa8□□□□□ -1.13
VTA1-202ENST00000367630 IRX4P78413 519 aa8□□□□□ -1.13
VTA1-202ENST00000367630 LACTBP83111 547 aaPredicted RBP8□□□□□ -1.13
VTA1-202ENST00000367630 ANKRD35Q8N283 1001 aa8□□□□□ -1.13
VTA1-202ENST00000367630 TEKT3Q9BXF9 490 aa8□□□□□ -1.13
VTA1-202ENST00000367630 ADD3Q9UEY8 706 aaKnown RBP8□□□□□ -1.13
VTA1-202ENST00000367630 PPME1Q9Y570 386 aa8□□□□□ -1.13
VTA1-202ENST00000367630 RAD21O60216 631 aa8□□□□□ -1.13
VTA1-202ENST00000367630 RAPGEF1Q13905 1077 aa8□□□□□ -1.13
VTA1-202ENST00000367630 LGSNQ5TDP6 509 aa8□□□□□ -1.13
VTA1-202ENST00000367630 TCERG1LQ5VWI1 586 aa8□□□□□ -1.13
VTA1-202ENST00000367630 XRRA1Q6P2D8 792 aa8□□□□□ -1.13
VTA1-202ENST00000367630 PEX26Q7Z412 305 aa8□□□□□ -1.13
VTA1-202ENST00000367630 RAD54LQ92698 747 aa8□□□□□ -1.13
VTA1-202ENST00000367630 DNAJC7Q99615 494 aa8□□□□□ -1.13
VTA1-202ENST00000367630 TUFT1Q9NNX1 390 aa8□□□□□ -1.13
VTA1-202ENST00000367630 NBPF26B4DH59 902 aa8□□□□□ -1.13
VTA1-202ENST00000367630 PPP2R5AQ15172 486 aa8□□□□□ -1.13
VTA1-202ENST00000367630 NBPF10Q6P3W6 841 aaKnown RBP8□□□□□ -1.13
VTA1-202ENST00000367630 PPP1R21Q6ZMI0 780 aa8□□□□□ -1.13
VTA1-202ENST00000367630 ADSSL1Q8N142 457 aa8□□□□□ -1.13
VTA1-202ENST00000367630 MPNDQ8N594 471 aa8□□□□□ -1.13
VTA1-202ENST00000367630 NBPF15Q8N660 670 aa8□□□□□ -1.13
VTA1-202ENST00000367630 RSRC1Q96IZ7 334 aaKnown RBP8□□□□□ -1.13
VTA1-202ENST00000367630 NACC1Q96RE7 527 aa8□□□□□ -1.13
VTA1-202ENST00000367630 CRAMP1Q96RY5 1269 aa8□□□□□ -1.13
VTA1-202ENST00000367630 PSTPIP2Q9H939 334 aa8□□□□□ -1.13
VTA1-202ENST00000367630 PUF60Q9UHX1 559 aaKnown RBP8□□□□□ -1.13
VTA1-202ENST00000367630 BCL9O00512 1426 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms