RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 RC3H1Q5TC82 1133 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 RRAGAQ7L523 313 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 GBP3Q9H0R5 595 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 NDST4Q9H3R1 872 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 KANSL2Q9H9L4 492 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 BLOC1S4Q9NUP1 217 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 SMARCAL1Q9NZC9 954 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 PHLPP1O60346 1717 aa11.02□□□□□ -0.65
UBE2D3-203ENST00000343106 MYH13Q9UKX3 1938 aa11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 MOCS3O95396 460 aa11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 VWA3BQ502W6 1294 aa11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 DPP8Q6V1X1 898 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 KCNK18Q7Z418 384 aa11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 SNX29Q8TEQ0 813 aa11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 RIN2Q8WYP3 895 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 LARP4BQ92615 738 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 SECISBP2LQ93073 1101 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 PNMA5Q96PV4 448 aa11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 GGA1Q9UJY5 639 aa11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 GPR75-ASB3A0A0A6YYF3 556 aa11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 EIF3CLB5ME19 914 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 PDHBP11177 359 aa11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 EIF4A3P38919 411 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 DNA2P51530 1060 aa11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 TUBB4BP68371 445 aa11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 CACNB1Q02641 598 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 ENOX2Q16206 610 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 ECM1Q16610 540 aa11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 PAPD7Q5XG87 772 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 TTBK2Q6IQ55 1244 aa11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 DDX12PQ92771 950 aa11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 EXOC4Q96A65 974 aa11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 EIF3CQ99613 913 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 IFIH1Q9BYX4 1025 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 ARHGAP20Q9P2F6 1191 aa11.01□□□□□ -0.65
UBE2D3-203ENST00000343106 MYH6P13533 1939 aa11□□□□□ -0.65
UBE2D3-203ENST00000343106 MPHOSPH10O00566 681 aaKnown RBP11□□□□□ -0.65
UBE2D3-203ENST00000343106 AKR1B10O60218 316 aa11□□□□□ -0.65
UBE2D3-203ENST00000343106 MYBL2P10244 700 aa11□□□□□ -0.65
UBE2D3-203ENST00000343106 AKR1B1P15121 316 aa11□□□□□ -0.65
UBE2D3-203ENST00000343106 ADCY7P51828 1080 aa11□□□□□ -0.65
UBE2D3-203ENST00000343106 NAP1L1P55209 391 aaKnown RBP11□□□□□ -0.65
UBE2D3-203ENST00000343106 RHBDL3P58872 404 aa11□□□□□ -0.65
UBE2D3-203ENST00000343106 GTF2IP78347 998 aa11□□□□□ -0.65
UBE2D3-203ENST00000343106 EZH2Q15910 746 aaKnown RBP11□□□□□ -0.65
UBE2D3-203ENST00000343106 CENPPQ6IPU0 288 aa11□□□□□ -0.65
UBE2D3-203ENST00000343106 CCDC170Q8IYT3 715 aa11□□□□□ -0.65
UBE2D3-203ENST00000343106 MTMR9Q96QG7 549 aa11□□□□□ -0.65
UBE2D3-203ENST00000343106 MXD3Q9BW11 206 aa11□□□□□ -0.65
UBE2D3-203ENST00000343106 NLRC4Q9NPP4 1024 aa11□□□□□ -0.65
UBE2D3-203ENST00000343106 EHD2Q9NZN4 543 aa11□□□□□ -0.65
UBE2D3-203ENST00000343106 POLLQ9UGP5 575 aa11□□□□□ -0.65
UBE2D3-203ENST00000343106 PCDHA13Q9Y5I0 950 aa11□□□□□ -0.65
UBE2D3-203ENST00000343106 CAPN6Q9Y6Q1 641 aa11□□□□□ -0.65
UBE2D3-203ENST00000343106 ROBO3Q96MS0 1386 aa11□□□□□ -0.65
UBE2D3-203ENST00000343106 LRRC53A6NM62 1247 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 NCK2O43639 380 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 EDIL3O43854 480 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 APBA1Q02410 837 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 TMEM266Q2M3C6 531 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 KRT79Q5XKE5 535 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 PRR5LQ6MZQ0 368 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 WDR93Q6P2C0 686 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 KCTD1Q719H9 257 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 RETREG2Q8NC44 543 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 EHBP1Q8NDI1 1231 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 COG1Q8WTW3 980 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 CRACR2AQ9BSW2 395 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 TRIM34Q9BYJ4 488 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 PLEKHA4Q9H4M7 779 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 MAGEF1Q9HAY2 307 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 NPHP3-ACAD11A0A0J9YXS1 232 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 A0A0U1RQG5 324 aaPredicted RBP10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 BUB1O43683 1085 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 KIF11P52732 1056 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 VAV2P52735 878 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 SLC7A5Q01650 507 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 ARID5AQ03989 594 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 GFPT1Q06210 699 aaPredicted RBP10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 UNC13DQ70J99 1090 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 CACNA2D4Q7Z3S7 1137 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 ZSCAN29Q8IWY8 852 aaPredicted RBP10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 NELFCDQ8IXH7 590 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 HDAC7Q8WUI4 952 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 ERGIC2Q96RQ1 377 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 ZHX3Q9H4I2 956 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 FAM204AQ9H8W3 233 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 MTMR4Q9NYA4 1195 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 ROBO1Q9Y6N7 1651 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 EP400Q96L91 3159 aa10.99□□□□□ -0.65
UBE2D3-203ENST00000343106 USO1O60763 962 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 IRX5P78411 483 aaPredicted RBP10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 RASSF7Q02833 373 aa10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 NFRKBQ6P4R8 1299 aa10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 FOXR1Q6PIV2 292 aa10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 TMC4Q7Z404 712 aa10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 ADGRF4Q8IZF3 695 aa10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 RAD54LQ92698 747 aa10.98□□□□□ -0.65
UBE2D3-203ENST00000343106 RIOX1Q9H6W3 641 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms