RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 LONP1P36776 959 aaKnown RBP13.15□□□□□ -0.3
C2orf88-201ENST00000340623 FAM200AQ8TCP9 573 aa13.15□□□□□ -0.3
C2orf88-201ENST00000340623 TSC1Q92574 1164 aa13.15□□□□□ -0.3
C2orf88-201ENST00000340623 GLG1Q92896 1179 aa13.15□□□□□ -0.3
C2orf88-201ENST00000340623 KIAA1683Q9H0B3 1180 aa13.15□□□□□ -0.3
C2orf88-201ENST00000340623 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.15□□□□□ -0.3
C2orf88-201ENST00000340623 A0A1W2PQ27 194 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 A0A1W2PQ64 194 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 A0A1W2PQD8 194 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 PTGS1P23219 599 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 U2AF2P26368 475 aaKnown RBP eCLIP13.14□□□□□ -0.31
C2orf88-201ENST00000340623 TAF1CQ15572 869 aaPredicted RBP13.14□□□□□ -0.31
C2orf88-201ENST00000340623 POTEDQ86YR6 584 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 SLC5A4Q9NY91 659 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 TBC1D12O60347 775 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 FDX1P10109 184 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 SMARCA1P28370 1054 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 IL17RAQ96F46 866 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 ZMYND12Q9H0C1 365 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 RIOX1Q9H6W3 641 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 TBC1D7Q9P0N9 293 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 FBXO40Q9UH90 709 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 ZKSCAN5Q9Y2L8 839 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 SRPRBQ9Y5M8 271 aaKnown RBP13.14□□□□□ -0.31
C2orf88-201ENST00000340623 TAF1LQ8IZX4 1826 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 CBX1P83916 185 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 ZC3H15Q8WU90 426 aaKnown RBP13.14□□□□□ -0.31
C2orf88-201ENST00000340623 CPLX3Q8WVH0 158 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 ZBTB9Q96C00 473 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 KIAA1024Q9UPX6 916 aa13.14□□□□□ -0.31
C2orf88-201ENST00000340623 POTEMA6NI47 508 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 PSMA7O14818 248 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 CNGA1P29973 690 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 NOM1Q5C9Z4 860 aaKnown RBP13.13□□□□□ -0.31
C2orf88-201ENST00000340623 GRAMD1CQ8IYS0 662 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 CNKSR2Q8WXI2 1034 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 KLRG1Q96E93 195 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 DDX60Q8IY21 1712 aaKnown RBP13.13□□□□□ -0.31
C2orf88-201ENST00000340623 DMTNQ08495 405 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 TCERG1LQ5VWI1 586 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 KRBA2Q6ZNG9 492 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 AZI2Q9H6S1 392 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 MEIS1O00470 390 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 LAD1O00515 517 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 IRF6O14896 467 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 PTPREP23469 700 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 CCND2P30279 289 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 MTIF2P46199 727 aaKnown RBP13.13□□□□□ -0.31
C2orf88-201ENST00000340623 HERC4Q5GLZ8 1057 aaPredicted RBP13.13□□□□□ -0.31
C2orf88-201ENST00000340623 BICD1Q96G01 975 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 SGIP1Q9BQI5 828 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 PPP1R9AQ9ULJ8 1098 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 ROBO3Q96MS0 1386 aa13.13□□□□□ -0.31
C2orf88-201ENST00000340623 PP2D1A8MPX8 630 aa13.12□□□□□ -0.31
C2orf88-201ENST00000340623 CETPP11597 493 aa13.12□□□□□ -0.31
C2orf88-201ENST00000340623 ZSCAN20P17040 1043 aaPredicted RBP13.12□□□□□ -0.31
C2orf88-201ENST00000340623 HIRAP54198 1017 aaPredicted RBP13.12□□□□□ -0.31
C2orf88-201ENST00000340623 KIF22Q14807 665 aa13.12□□□□□ -0.31
C2orf88-201ENST00000340623 CCDC40Q4G0X9 1142 aa13.12□□□□□ -0.31
C2orf88-201ENST00000340623 STXBP4Q6ZWJ1 553 aa13.12□□□□□ -0.31
C2orf88-201ENST00000340623 CCDC65Q8IXS2 484 aa13.12□□□□□ -0.31
C2orf88-201ENST00000340623 NT5C3AQ9H0P0 336 aa13.12□□□□□ -0.31
C2orf88-201ENST00000340623 MYH13Q9UKX3 1938 aa13.12□□□□□ -0.31
C2orf88-201ENST00000340623 NSUN6Q8TEA1 469 aaKnown RBP13.12□□□□□ -0.31
C2orf88-201ENST00000340623 MKL1Q969V6 931 aa13.12□□□□□ -0.31
C2orf88-201ENST00000340623 BCORQ6W2J9 1755 aa13.12□□□□□ -0.31
C2orf88-201ENST00000340623 IPO7O95373 1038 aaKnown RBP13.12□□□□□ -0.31
C2orf88-201ENST00000340623 UTP14CQ5TAP6 766 aaKnown RBP13.12□□□□□ -0.31
C2orf88-201ENST00000340623 GINS2Q9Y248 185 aa13.12□□□□□ -0.31
C2orf88-201ENST00000340623 CBFA2T2O43439 604 aa13.11□□□□□ -0.31
C2orf88-201ENST00000340623 GPBP1Q86WP2 473 aa13.11□□□□□ -0.31
C2orf88-201ENST00000340623 NOLC1Q14978 699 aaKnown RBP eCLIP13.11□□□□□ -0.31
C2orf88-201ENST00000340623 MAP7D2Q96T17 732 aa13.11□□□□□ -0.31
C2orf88-201ENST00000340623 KIAA1468Q9P260 1216 aa13.11□□□□□ -0.31
C2orf88-201ENST00000340623 MYH2Q9UKX2 1941 aa13.11□□□□□ -0.31
C2orf88-201ENST00000340623 CAVIN2O95810 425 aa13.11□□□□□ -0.31
C2orf88-201ENST00000340623 MTMR1Q13613 665 aa13.11□□□□□ -0.31
C2orf88-201ENST00000340623 TMC6Q7Z403 805 aa13.11□□□□□ -0.31
C2orf88-201ENST00000340623 PPFIBP1Q86W92 1011 aa13.11□□□□□ -0.31
C2orf88-201ENST00000340623 GJA10Q969M2 543 aa13.11□□□□□ -0.31
C2orf88-201ENST00000340623 TMEM51Q9NW97 253 aa13.11□□□□□ -0.31
C2orf88-201ENST00000340623 KDM3AQ9Y4C1 1321 aa13.11□□□□□ -0.31
C2orf88-201ENST00000340623 CCDC169A6NNP5 214 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 RPS6P62753 249 aaKnown RBP13.1□□□□□ -0.31
C2orf88-201ENST00000340623 TYW1BQ6NUM6 668 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 ANKRD13CQ8N6S4 541 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 PCDHA5Q9Y5H7 936 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 BAZ2AQ9UIF9 1905 aaKnown RBP13.1□□□□□ -0.31
C2orf88-201ENST00000340623 CHD4Q14839 1912 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 N4BP2Q86UW6 1770 aaPredicted RBP13.1□□□□□ -0.31
C2orf88-201ENST00000340623 NFIBO00712 420 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 ICAM1P05362 532 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 FCER1AP12319 257 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 DDIT3P35638 169 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 LONRF3Q496Y0 759 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 ARL6IP4Q66PJ3 421 aaKnown RBP13.1□□□□□ -0.31
C2orf88-201ENST00000340623 MMP19Q99542 508 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 WDR11Q9BZH6 1224 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 MYCP01106 439 aaPredicted RBP13.1□□□□□ -0.31
C2orf88-201ENST00000340623 RRP1BQ14684 758 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms