RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 FGRP09769 529 aa16.22■□□□□ 0.19
UPK3BL1-201ENST00000340457 PDHBP11177 359 aa16.22■□□□□ 0.19
UPK3BL1-201ENST00000340457 ACTN1P12814 892 aa16.22■□□□□ 0.19
UPK3BL1-201ENST00000340457 ALX1Q15699 326 aa16.22■□□□□ 0.19
UPK3BL1-201ENST00000340457 USH1GQ495M9 461 aa16.22■□□□□ 0.19
UPK3BL1-201ENST00000340457 ANKRD45Q5TZF3 282 aa16.22■□□□□ 0.19
UPK3BL1-201ENST00000340457 RETREG2Q8NC44 543 aa16.22■□□□□ 0.19
UPK3BL1-201ENST00000340457 ARNTL2Q8WYA1 636 aa16.22■□□□□ 0.19
UPK3BL1-201ENST00000340457 IQCF3P0C7M6 154 aa16.21■□□□□ 0.19
UPK3BL1-201ENST00000340457 GOLGA8HP0CJ92 632 aa16.21■□□□□ 0.19
UPK3BL1-201ENST00000340457 TXNP10599 105 aaKnown RBP16.21■□□□□ 0.19
UPK3BL1-201ENST00000340457 ZNF543Q08ER8 600 aa16.21■□□□□ 0.19
UPK3BL1-201ENST00000340457 BRDTQ58F21 947 aaPredicted RBP16.21■□□□□ 0.19
UPK3BL1-201ENST00000340457 TMCO2Q7Z6W1 182 aaPredicted RBP16.21■□□□□ 0.19
UPK3BL1-201ENST00000340457 SCFD2Q8WU76 684 aa16.21■□□□□ 0.19
UPK3BL1-201ENST00000340457 EVI5LQ96CN4 794 aa16.21■□□□□ 0.19
UPK3BL1-201ENST00000340457 NOD1Q9Y239 953 aa16.21■□□□□ 0.19
UPK3BL1-201ENST00000340457 A6NJR5 290 aa16.2■□□□□ 0.18
UPK3BL1-201ENST00000340457 GTPBP6O43824 516 aaPredicted RBP16.2■□□□□ 0.18
UPK3BL1-201ENST00000340457 EDNRBP24530 442 aa16.2■□□□□ 0.18
UPK3BL1-201ENST00000340457 TAP1Q03518 808 aa16.2■□□□□ 0.18
UPK3BL1-201ENST00000340457 NFRKBQ6P4R8 1299 aa16.2■□□□□ 0.18
UPK3BL1-201ENST00000340457 ZNF589Q86UQ0 364 aaPredicted RBP16.2■□□□□ 0.18
UPK3BL1-201ENST00000340457 HERC6Q8IVU3 1022 aa16.2■□□□□ 0.18
UPK3BL1-201ENST00000340457 TBC1D5Q92609 795 aa16.2■□□□□ 0.18
UPK3BL1-201ENST00000340457 ZKSCAN3Q9BRR0 538 aa16.2■□□□□ 0.18
UPK3BL1-201ENST00000340457 UBA5Q9GZZ9 404 aa16.2■□□□□ 0.18
UPK3BL1-201ENST00000340457 HELLSQ9NRZ9 838 aa16.2■□□□□ 0.18
UPK3BL1-201ENST00000340457 RAD50Q92878 1312 aa16.2■□□□□ 0.18
UPK3BL1-201ENST00000340457 LOC102724159A0A0B4J2E5 919 aa16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 NKRFO15226 690 aaKnown RBP eCLIP16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 HSPD1P10809 573 aaKnown RBP16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 RFC2P35250 354 aa16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 PWP2Q15269 919 aaKnown RBP16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 MCMDC2Q4G0Z9 681 aa16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 CHST3Q7LGC8 479 aa16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 TBC1D10CQ8IV04 446 aa16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 AFG1LQ8WV93 481 aa16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 SLC9A7Q96T83 725 aa16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 TCP11L1Q9NUJ3 509 aa16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 ZBTB47Q9UFB7 747 aaPredicted RBP16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 SUPT16HQ9Y5B9 1047 aaKnown RBP16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 TANC1Q9C0D5 1861 aa16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 PITPNM1O00562 1244 aa16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 KPNA6O60684 536 aa16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 PDE1AP54750 535 aa16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 NMIQ13287 307 aaPredicted RBP16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 BFSP2Q13515 415 aa16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 PTGISQ16647 500 aa16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 LY6KQ17RY6 165 aa16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 SEPT14Q6ZU15 432 aa16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 DNERQ8NFT8 737 aa16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 MPHOSPH6Q99547 160 aaKnown RBP16.19■□□□□ 0.18
UPK3BL1-201ENST00000340457 WDR19Q8NEZ3 1342 aa16.18■□□□□ 0.18
UPK3BL1-201ENST00000340457 PTPRSQ13332 1948 aa16.18■□□□□ 0.18
UPK3BL1-201ENST00000340457 LCHNA4D1U4 455 aa16.18■□□□□ 0.18
UPK3BL1-201ENST00000340457 GRB10Q13322 594 aa16.18■□□□□ 0.18
UPK3BL1-201ENST00000340457 AAK1Q2M2I8 961 aa16.18■□□□□ 0.18
UPK3BL1-201ENST00000340457 GDF6Q6KF10 455 aaPredicted RBP16.18■□□□□ 0.18
UPK3BL1-201ENST00000340457 MFSD6Q6ZSS7 791 aa16.18■□□□□ 0.18
UPK3BL1-201ENST00000340457 PHOSPHO2Q8TCD6 241 aa16.18■□□□□ 0.18
UPK3BL1-201ENST00000340457 CTAGE1Q96RT6 745 aa16.18■□□□□ 0.18
UPK3BL1-201ENST00000340457 NEDD4P46934 1319 aa16.17■□□□□ 0.18
UPK3BL1-201ENST00000340457 KIF28PB7ZC32 967 aa16.17■□□□□ 0.18
UPK3BL1-201ENST00000340457 TLL1O43897 1013 aa16.17■□□□□ 0.18
UPK3BL1-201ENST00000340457 SNHG28P0DPA3 235 aa16.17■□□□□ 0.18
UPK3BL1-201ENST00000340457 POU3F3P20264 500 aaPredicted RBP16.17■□□□□ 0.18
UPK3BL1-201ENST00000340457 RRP1P56182 461 aaKnown RBP16.17■□□□□ 0.18
UPK3BL1-201ENST00000340457 PTPN11Q06124 597 aaPredicted RBP16.17■□□□□ 0.18
UPK3BL1-201ENST00000340457 GPNMBQ14956 572 aa16.17■□□□□ 0.18
UPK3BL1-201ENST00000340457 CCDC62Q6P9F0 684 aa16.17■□□□□ 0.18
UPK3BL1-201ENST00000340457 DHX38Q92620 1227 aaKnown RBP16.17■□□□□ 0.18
UPK3BL1-201ENST00000340457 TAAR1Q96RJ0 339 aa16.17■□□□□ 0.18
UPK3BL1-201ENST00000340457 COL20A1Q9P218 1284 aa16.17■□□□□ 0.18
UPK3BL1-201ENST00000340457 MMP3P08254 477 aa16.16■□□□□ 0.18
UPK3BL1-201ENST00000340457 KCNJ6P48051 423 aa16.16■□□□□ 0.18
UPK3BL1-201ENST00000340457 WDR5P61964 334 aaKnown RBP16.16■□□□□ 0.18
UPK3BL1-201ENST00000340457 DEFB103AP81534 67 aa16.16■□□□□ 0.18
UPK3BL1-201ENST00000340457 ARHGAP1Q07960 439 aa16.16■□□□□ 0.18
UPK3BL1-201ENST00000340457 CDC37Q16543 378 aaPredicted RBP16.16■□□□□ 0.18
UPK3BL1-201ENST00000340457 TCTN1Q2MV58 587 aa16.16■□□□□ 0.18
UPK3BL1-201ENST00000340457 GDPD5Q8WTR4 605 aa16.16■□□□□ 0.18
UPK3BL1-201ENST00000340457 KAT2BQ92831 832 aa16.16■□□□□ 0.18
UPK3BL1-201ENST00000340457 TTC14Q96N46 770 aa16.16■□□□□ 0.18
UPK3BL1-201ENST00000340457 EPHX3Q9H6B9 360 aa16.16■□□□□ 0.18
UPK3BL1-201ENST00000340457 PNMA2Q9UL42 364 aa16.16■□□□□ 0.18
UPK3BL1-201ENST00000340457 MTUS1Q9ULD2 1270 aa16.16■□□□□ 0.18
UPK3BL1-201ENST00000340457 CCDC171Q6TFL3 1326 aa16.15■□□□□ 0.18
UPK3BL1-201ENST00000340457 TRIM6-TRIM34B2RNG4 842 aa16.15■□□□□ 0.18
UPK3BL1-201ENST00000340457 B4DLN1 442 aa16.15■□□□□ 0.18
UPK3BL1-201ENST00000340457 LPXNO60711 386 aa16.15■□□□□ 0.18
UPK3BL1-201ENST00000340457 GH1P01241 217 aa16.15■□□□□ 0.18
UPK3BL1-201ENST00000340457 MRPL12P52815 198 aaKnown RBP16.15■□□□□ 0.18
UPK3BL1-201ENST00000340457 SYTL5Q8TDW5 730 aaPredicted RBP16.15■□□□□ 0.18
UPK3BL1-201ENST00000340457 RILPL2Q969X0 211 aa16.15■□□□□ 0.18
UPK3BL1-201ENST00000340457 ALG1Q9BT22 464 aa16.15■□□□□ 0.18
UPK3BL1-201ENST00000340457 ZBED2Q9BTP6 218 aa16.15■□□□□ 0.18
UPK3BL1-201ENST00000340457 SORBS3O60504 671 aa16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 BAIAP3O94812 1187 aa16.14■□□□□ 0.17
UPK3BL1-201ENST00000340457 SELPP16109 830 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms