RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 FGD4Q96M96 766 aa17.63■□□□□ 0.41
SEC13-201ENST00000337354 PHF20Q9BVI0 1012 aa17.63■□□□□ 0.41
SEC13-201ENST00000337354 COL20A1Q9P218 1284 aa17.63■□□□□ 0.41
SEC13-201ENST00000337354 NRBP1Q9UHY1 535 aa17.63■□□□□ 0.41
SEC13-201ENST00000337354 PCDHA4Q9UN74 947 aa17.63■□□□□ 0.41
SEC13-201ENST00000337354 UBXN2AP68543 259 aa17.62■□□□□ 0.41
SEC13-201ENST00000337354 REXO1Q8N1G1 1221 aaKnown RBP17.62■□□□□ 0.41
SEC13-201ENST00000337354 SH3TC2Q8TF17 1288 aa17.62■□□□□ 0.41
SEC13-201ENST00000337354 PURBQ96QR8 312 aaKnown RBP17.62■□□□□ 0.41
SEC13-201ENST00000337354 EHMT1Q9H9B1 1298 aa17.62■□□□□ 0.41
SEC13-201ENST00000337354 PXMP2Q9NR77 195 aa17.62■□□□□ 0.41
SEC13-201ENST00000337354 FLRT1Q9NZU1 646 aa17.62■□□□□ 0.41
SEC13-201ENST00000337354 HTTP42858 3142 aa17.61■□□□□ 0.41
SEC13-201ENST00000337354 DTNBO60941 627 aa17.61■□□□□ 0.41
SEC13-201ENST00000337354 ELNP15502 786 aa17.61■□□□□ 0.41
SEC13-201ENST00000337354 EDNRBP24530 442 aa17.61■□□□□ 0.41
SEC13-201ENST00000337354 GJB2P29033 226 aa17.61■□□□□ 0.41
SEC13-201ENST00000337354 BECN1Q14457 450 aa17.61■□□□□ 0.41
SEC13-201ENST00000337354 XRRA1Q6P2D8 792 aa17.61■□□□□ 0.41
SEC13-201ENST00000337354 BLIDQ8IZY5 108 aa17.61■□□□□ 0.41
SEC13-201ENST00000337354 SHISA4Q96DD7 197 aa17.61■□□□□ 0.41
SEC13-201ENST00000337354 C8orf76Q96K31 380 aa17.61■□□□□ 0.41
SEC13-201ENST00000337354 BRMS1Q9HCU9 246 aa17.61■□□□□ 0.41
SEC13-201ENST00000337354 BIN2Q9UBW5 565 aaPredicted RBP17.61■□□□□ 0.41
SEC13-201ENST00000337354 PCDHA6Q9UN73 950 aa17.61■□□□□ 0.41
SEC13-201ENST00000337354 CNPY2Q9Y2B0 182 aa17.61■□□□□ 0.41
SEC13-201ENST00000337354 PCDHA8Q9Y5H6 950 aa17.61■□□□□ 0.41
SEC13-201ENST00000337354 MYCP01106 439 aaPredicted RBP17.6■□□□□ 0.41
SEC13-201ENST00000337354 UBE2SQ16763 222 aa17.6■□□□□ 0.41
SEC13-201ENST00000337354 ARMCX2Q7L311 632 aa17.6■□□□□ 0.41
SEC13-201ENST00000337354 FBXO18Q8NFZ0 1043 aa17.6■□□□□ 0.41
SEC13-201ENST00000337354 ARMC5Q96C12 935 aa17.6■□□□□ 0.41
SEC13-201ENST00000337354 PDCD2LQ9BRP1 358 aa17.6■□□□□ 0.41
SEC13-201ENST00000337354 ABHD16BQ9H3Z7 469 aa17.6■□□□□ 0.41
SEC13-201ENST00000337354 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.6■□□□□ 0.41
SEC13-201ENST00000337354 KCNJ14Q9UNX9 436 aa17.6■□□□□ 0.41
SEC13-201ENST00000337354 ASTN1O14525 1302 aa17.6■□□□□ 0.41
SEC13-201ENST00000337354 STAM2O75886 525 aa17.59■□□□□ 0.41
SEC13-201ENST00000337354 SNAI1O95863 264 aaPredicted RBP17.59■□□□□ 0.41
SEC13-201ENST00000337354 MMP1P03956 469 aa17.59■□□□□ 0.41
SEC13-201ENST00000337354 HSP90AA1P07900 732 aaKnown RBP17.59■□□□□ 0.41
SEC13-201ENST00000337354 NR3C2P08235 984 aa17.59■□□□□ 0.41
SEC13-201ENST00000337354 CYP2C19P33261 490 aa17.59■□□□□ 0.41
SEC13-201ENST00000337354 PDE4DQ08499 809 aa17.59■□□□□ 0.41
SEC13-201ENST00000337354 SAFBQ15424 915 aaKnown RBP eCLIP17.59■□□□□ 0.416e-6■□□□□ 10.6
SEC13-201ENST00000337354 STXBP2Q15833 593 aa17.59■□□□□ 0.41
SEC13-201ENST00000337354 MAP3K21Q5TCX8 1036 aa17.59■□□□□ 0.41
SEC13-201ENST00000337354 KRT40Q6A162 431 aa17.59■□□□□ 0.41
SEC13-201ENST00000337354 VSIG10LQ86VR7 867 aa17.59■□□□□ 0.41
SEC13-201ENST00000337354 ZNF236Q9UL36 1845 aa17.59■□□□□ 0.41
SEC13-201ENST00000337354 FRMPD4Q14CM0 1322 aa17.59■□□□□ 0.41
SEC13-201ENST00000337354 RPTORQ8N122 1335 aa17.59■□□□□ 0.41
SEC13-201ENST00000337354 M0R2N6 131 aa17.58■□□□□ 0.4
SEC13-201ENST00000337354 EIF3JO75822 258 aaKnown RBP17.58■□□□□ 0.4
SEC13-201ENST00000337354 INHAP05111 366 aa17.58■□□□□ 0.4
SEC13-201ENST00000337354 PDIA4P13667 645 aaKnown RBP17.58■□□□□ 0.4
SEC13-201ENST00000337354 EIF2AK2P19525 551 aaKnown RBP17.58■□□□□ 0.4
SEC13-201ENST00000337354 PDCP20941 246 aa17.58■□□□□ 0.4
SEC13-201ENST00000337354 CACNB2Q08289 660 aaPredicted RBP17.58■□□□□ 0.4
SEC13-201ENST00000337354 PGM5Q15124 567 aa17.58■□□□□ 0.4
SEC13-201ENST00000337354 NPY5RQ15761 445 aa17.58■□□□□ 0.4
SEC13-201ENST00000337354 GJB4Q9NTQ9 266 aa17.58■□□□□ 0.4
SEC13-201ENST00000337354 BAZ2BQ9UIF8 2168 aaKnown RBP17.57■□□□□ 0.4
SEC13-201ENST00000337354 CCND2P30279 289 aa17.57■□□□□ 0.4
SEC13-201ENST00000337354 KRT2P35908 639 aa17.57■□□□□ 0.4
SEC13-201ENST00000337354 ACVR2BQ13705 512 aa17.57■□□□□ 0.4
SEC13-201ENST00000337354 JAKMIP3Q5VZ66 844 aa17.57■□□□□ 0.4
SEC13-201ENST00000337354 PCNX4Q63HM2 1172 aa17.57■□□□□ 0.4
SEC13-201ENST00000337354 LARP1BQ659C4 914 aaKnown RBP17.57■□□□□ 0.4
SEC13-201ENST00000337354 ZNF333Q96JL9 665 aa17.57■□□□□ 0.4
SEC13-201ENST00000337354 ANO3Q9BYT9 981 aa17.57■□□□□ 0.4
SEC13-201ENST00000337354 HMX1Q9NP08 348 aaPredicted RBP17.57■□□□□ 0.4
SEC13-201ENST00000337354 VTA1Q9NP79 307 aa17.57■□□□□ 0.4
SEC13-201ENST00000337354 PRKAR2AP13861 404 aaKnown RBP17.56■□□□□ 0.4
SEC13-201ENST00000337354 SREBF1P36956 1147 aa17.56■□□□□ 0.4
SEC13-201ENST00000337354 KRT25Q7Z3Z0 450 aa17.56■□□□□ 0.4
SEC13-201ENST00000337354 TMEM260Q9NX78 707 aa17.56■□□□□ 0.4
SEC13-201ENST00000337354 PLXNA1Q9UIW2 1896 aa17.55■□□□□ 0.4
SEC13-201ENST00000337354 ZNF865P0CJ78 1059 aaPredicted RBP17.55■□□□□ 0.4
SEC13-201ENST00000337354 MYCLP12524 364 aaPredicted RBP17.55■□□□□ 0.4
SEC13-201ENST00000337354 CYBAP13498 195 aa17.55■□□□□ 0.4
SEC13-201ENST00000337354 USP11P51784 963 aa17.55■□□□□ 0.4
SEC13-201ENST00000337354 TRIM32Q13049 653 aa17.55■□□□□ 0.4
SEC13-201ENST00000337354 IQSEC1Q6DN90 963 aa17.55■□□□□ 0.4
SEC13-201ENST00000337354 DIS3L2Q8IYB7 885 aaKnown RBP17.55■□□□□ 0.4
SEC13-201ENST00000337354 TMEM106CQ9BVX2 250 aa17.55■□□□□ 0.4
SEC13-201ENST00000337354 KATNBL1Q9H079 304 aa17.55■□□□□ 0.4
SEC13-201ENST00000337354 FOXP1Q9H334 677 aaPredicted RBP17.55■□□□□ 0.4
SEC13-201ENST00000337354 FAM184BQ9ULE4 1060 aa17.55■□□□□ 0.4
SEC13-201ENST00000337354 ZNFX1Q9P2E3 1918 aaKnown RBP17.55■□□□□ 0.4
SEC13-201ENST00000337354 CCDC194A0A1B0GVG4 234 aa17.54■□□□□ 0.4
SEC13-201ENST00000337354 BTBD18B2RXH4 712 aa17.54■□□□□ 0.4
SEC13-201ENST00000337354 H3BQV1 296 aa17.54■□□□□ 0.4
SEC13-201ENST00000337354 MAFGO15525 162 aa17.54■□□□□ 0.4
SEC13-201ENST00000337354 MSCO60682 206 aa17.54■□□□□ 0.4
SEC13-201ENST00000337354 CYP3A4P08684 503 aa17.54■□□□□ 0.4
SEC13-201ENST00000337354 NONOQ15233 471 aaKnown RBP eCLIP17.54■□□□□ 0.4
SEC13-201ENST00000337354 GNPTABQ3T906 1256 aa17.54■□□□□ 0.4
SEC13-201ENST00000337354 PRAMEF19Q5SWL8 479 aa17.54■□□□□ 0.4
SEC13-201ENST00000337354 KCNV1Q6PIU1 500 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms