RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 FOXD4L5Q5VV16 416 aaPredicted RBP17.97■□□□□ 0.47
TUBA3E-201ENST00000312988 FAM133AQ8N9E0 248 aa17.97■□□□□ 0.47
TUBA3E-201ENST00000312988 NSUN6Q8TEA1 469 aaKnown RBP17.97■□□□□ 0.47
TUBA3E-201ENST00000312988 FOXD4L4Q8WXT5 416 aaPredicted RBP17.97■□□□□ 0.47
TUBA3E-201ENST00000312988 GJD2Q9UKL4 321 aa17.97■□□□□ 0.47
TUBA3E-201ENST00000312988 TRIM17Q9Y577 477 aa17.97■□□□□ 0.47
TUBA3E-201ENST00000312988 SOWAHBA6NEL2 793 aa17.96■□□□□ 0.47
TUBA3E-201ENST00000312988 FLT3LGP49771 235 aa17.96■□□□□ 0.47
TUBA3E-201ENST00000312988 UBXN2AP68543 259 aa17.96■□□□□ 0.47
TUBA3E-201ENST00000312988 ZNF792Q3KQV3 632 aa17.96■□□□□ 0.47
TUBA3E-201ENST00000312988 PIK3AP1Q6ZUJ8 805 aa17.96■□□□□ 0.47
TUBA3E-201ENST00000312988 FERMT3Q86UX7 667 aa17.96■□□□□ 0.47
TUBA3E-201ENST00000312988 DNERQ8NFT8 737 aa17.96■□□□□ 0.47
TUBA3E-201ENST00000312988 MPHOSPH6Q99547 160 aaKnown RBP17.96■□□□□ 0.47
TUBA3E-201ENST00000312988 APBA2Q99767 749 aa17.96■□□□□ 0.47
TUBA3E-201ENST00000312988 FOXP1Q9H334 677 aaPredicted RBP17.96■□□□□ 0.47
TUBA3E-201ENST00000312988 SRRDQ9UH36 339 aa17.96■□□□□ 0.47
TUBA3E-201ENST00000312988 GABRQQ9UN88 632 aa17.96■□□□□ 0.47
TUBA3E-201ENST00000312988 MTMR6Q9Y217 621 aa17.96■□□□□ 0.47
TUBA3E-201ENST00000312988 ZNF236Q9UL36 1845 aa17.96■□□□□ 0.46
TUBA3E-201ENST00000312988 B4DLN1 442 aa17.95■□□□□ 0.46
TUBA3E-201ENST00000312988 M0R2N6 131 aa17.95■□□□□ 0.46
TUBA3E-201ENST00000312988 NONOQ15233 471 aaKnown RBP eCLIP17.95■□□□□ 0.46
TUBA3E-201ENST00000312988 NPLOC4Q8TAT6 608 aa17.95■□□□□ 0.46
TUBA3E-201ENST00000312988 PXMP2Q9NR77 195 aa17.95■□□□□ 0.46
TUBA3E-201ENST00000312988 KIF28PB7ZC32 967 aa17.94■□□□□ 0.46
TUBA3E-201ENST00000312988 ALDH5A1P51649 535 aaPredicted RBP17.94■□□□□ 0.46
TUBA3E-201ENST00000312988 NOSTRINQ8IVI9 506 aa17.94■□□□□ 0.46
TUBA3E-201ENST00000312988 RAET1EQ8TD07 263 aa17.94■□□□□ 0.46
TUBA3E-201ENST00000312988 USP6NLQ92738 828 aa17.94■□□□□ 0.46
TUBA3E-201ENST00000312988 DIS3Q9Y2L1 958 aaKnown RBP17.94■□□□□ 0.46
TUBA3E-201ENST00000312988 CASP8AP2Q9UKL3 1982 aa17.94■□□□□ 0.46
TUBA3E-201ENST00000312988 PLXNA1Q9UIW2 1896 aa17.94■□□□□ 0.46
TUBA3E-201ENST00000312988 HOXC6P09630 235 aa17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 MYCLP12524 364 aaPredicted RBP17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 PDE4DQ08499 809 aa17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 PKP1Q13835 747 aa17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 INF2Q27J81 1249 aa17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 OTOP1Q7RTM1 612 aa17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 TBCKQ8TEA7 893 aa17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 TNFRSF25Q93038 417 aa17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 MAML3Q96JK9 1138 aa17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 LCTP09848 1927 aa17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 FAM205CA6NFA0 338 aa17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 ASB14A6NK59 587 aa17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 ZSCAN22P10073 491 aaPredicted RBP17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 U2AF2P26368 475 aaKnown RBP eCLIP17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 CCND2P30279 289 aa17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 PRMT2P55345 433 aa17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 PGM5Q15124 567 aa17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 FGD4Q96M96 766 aa17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 PDCD2LQ9BRP1 358 aa17.93■□□□□ 0.46
TUBA3E-201ENST00000312988 RPTORQ8N122 1335 aa17.92■□□□□ 0.46
TUBA3E-201ENST00000312988 PCNTO95613 3336 aa17.92■□□□□ 0.46
TUBA3E-201ENST00000312988 NR3C2P08235 984 aa17.92■□□□□ 0.46
TUBA3E-201ENST00000312988 XRCC5P13010 732 aaKnown RBP17.92■□□□□ 0.46
TUBA3E-201ENST00000312988 ZNF76P36508 570 aa17.92■□□□□ 0.46
TUBA3E-201ENST00000312988 SREBF1P36956 1147 aa17.92■□□□□ 0.46
TUBA3E-201ENST00000312988 ARHGAP4P98171 946 aa17.92■□□□□ 0.46
TUBA3E-201ENST00000312988 CCL14Q16627 93 aa17.92■□□□□ 0.46
TUBA3E-201ENST00000312988 EARS2Q5JPH6 523 aaKnown RBP17.92■□□□□ 0.46
TUBA3E-201ENST00000312988 ZNF467Q7Z7K2 595 aaPredicted RBP17.92■□□□□ 0.46
TUBA3E-201ENST00000312988 IL31RAQ8NI17 732 aa17.92■□□□□ 0.46
TUBA3E-201ENST00000312988 IWS1Q96ST2 819 aa17.92■□□□□ 0.46
TUBA3E-201ENST00000312988 NOL7Q9UMY1 257 aaKnown RBP17.92■□□□□ 0.46
TUBA3E-201ENST00000312988 DDX49Q9Y6V7 483 aaKnown RBP17.92■□□□□ 0.46
TUBA3E-201ENST00000312988 ASTN1O14525 1302 aa17.92■□□□□ 0.46
TUBA3E-201ENST00000312988 ATP2B1P20020 1258 aa17.91■□□□□ 0.46
TUBA3E-201ENST00000312988 NUCB2P80303 420 aa17.91■□□□□ 0.46
TUBA3E-201ENST00000312988 RESTQ13127 1097 aa17.91■□□□□ 0.46
TUBA3E-201ENST00000312988 FRMPD4Q14CM0 1322 aa17.91■□□□□ 0.46
TUBA3E-201ENST00000312988 ARMCX2Q7L311 632 aa17.91■□□□□ 0.46
TUBA3E-201ENST00000312988 BRAPQ7Z569 592 aa17.91■□□□□ 0.46
TUBA3E-201ENST00000312988 LOC102724159A0A0B4J2E5 919 aa17.9■□□□□ 0.46
TUBA3E-201ENST00000312988 ADCY3O60266 1144 aa17.9■□□□□ 0.46
TUBA3E-201ENST00000312988 F13A1P00488 732 aa17.9■□□□□ 0.46
TUBA3E-201ENST00000312988 IRF5Q13568 498 aa17.9■□□□□ 0.46
TUBA3E-201ENST00000312988 PWP2Q15269 919 aaKnown RBP17.9■□□□□ 0.46
TUBA3E-201ENST00000312988 STXBP2Q15833 593 aa17.9■□□□□ 0.46
TUBA3E-201ENST00000312988 LETM2Q2VYF4 491 aa17.9■□□□□ 0.46
TUBA3E-201ENST00000312988 PCNX4Q63HM2 1172 aa17.9■□□□□ 0.46
TUBA3E-201ENST00000312988 OLFML2BQ68BL8 750 aa17.9■□□□□ 0.46
TUBA3E-201ENST00000312988 NEK8Q86SG6 692 aa17.9■□□□□ 0.46
TUBA3E-201ENST00000312988 TRMT44Q8IYL2 757 aaKnown RBP17.9■□□□□ 0.46
TUBA3E-201ENST00000312988 ZFP91Q96JP5 570 aaPredicted RBP17.9■□□□□ 0.46
TUBA3E-201ENST00000312988 TINF2Q9BSI4 451 aa17.9■□□□□ 0.46
TUBA3E-201ENST00000312988 ZSCAN16Q9H4T2 348 aaPredicted RBP17.9■□□□□ 0.46
TUBA3E-201ENST00000312988 FLRT1Q9NZU1 646 aa17.9■□□□□ 0.46
TUBA3E-201ENST00000312988 BRD1O95696 1058 aa17.89■□□□□ 0.45
TUBA3E-201ENST00000312988 DDIT3P35638 169 aa17.89■□□□□ 0.45
TUBA3E-201ENST00000312988 MFSD14CQ5VZR4 134 aa17.89■□□□□ 0.45
TUBA3E-201ENST00000312988 XRRA1Q6P2D8 792 aa17.89■□□□□ 0.45
TUBA3E-201ENST00000312988 EEPD1Q7L9B9 569 aa17.89■□□□□ 0.45
TUBA3E-201ENST00000312988 CTU1Q7Z7A3 348 aaKnown RBP17.89■□□□□ 0.45
TUBA3E-201ENST00000312988 MSL3Q8N5Y2 521 aaKnown RBP17.89■□□□□ 0.45
TUBA3E-201ENST00000312988 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.89■□□□□ 0.45
TUBA3E-201ENST00000312988 RTEL1Q9NZ71 1219 aa17.89■□□□□ 0.45
TUBA3E-201ENST00000312988 CIZ1Q9ULV3 898 aaPredicted RBP17.89■□□□□ 0.45
TUBA3E-201ENST00000312988 MYH7BA7E2Y1 1941 aa17.89■□□□□ 0.45
TUBA3E-201ENST00000312988 SYNGAP1Q96PV0 1343 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms