RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 MBD3O95983 291 aa21.51■■□□□ 1.03
PDLIM3-202ENST00000284770 SLC30A10Q6XR72 485 aa21.51■■□□□ 1.03
PDLIM3-202ENST00000284770 SHCBP1Q8NEM2 672 aa21.51■■□□□ 1.03
PDLIM3-202ENST00000284770 A1CFQ9NQ94 594 aaKnown RBP21.51■■□□□ 1.03
PDLIM3-202ENST00000284770 CYP39A1Q9NYL5 469 aa21.51■■□□□ 1.03
PDLIM3-202ENST00000284770 CCNA1P78396 465 aa21.51■■□□□ 1.03
PDLIM3-202ENST00000284770 ARHGAP4P98171 946 aa21.51■■□□□ 1.03
PDLIM3-202ENST00000284770 ORC2Q13416 577 aaPredicted RBP21.51■■□□□ 1.03
PDLIM3-202ENST00000284770 TAF1CQ15572 869 aaPredicted RBP21.51■■□□□ 1.03
PDLIM3-202ENST00000284770 PPP4R3AQ6IN85 833 aa21.51■■□□□ 1.03
PDLIM3-202ENST00000284770 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.51■■□□□ 1.03
PDLIM3-202ENST00000284770 MROH8Q9H579 483 aa21.51■■□□□ 1.03
PDLIM3-202ENST00000284770 MORC2Q9Y6X9 1032 aaPredicted RBP21.51■■□□□ 1.03
PDLIM3-202ENST00000284770 PPP6R2O75170 966 aa21.5■■□□□ 1.03
PDLIM3-202ENST00000284770 ANKRD35Q8N283 1001 aa21.5■■□□□ 1.03
PDLIM3-202ENST00000284770 NAP1L4Q99733 375 aaKnown RBP21.5■■□□□ 1.03
PDLIM3-202ENST00000284770 PFASO15067 1338 aa21.5■■□□□ 1.03
PDLIM3-202ENST00000284770 ADGRA2Q96PE1 1338 aa21.5■■□□□ 1.03
PDLIM3-202ENST00000284770 RBBP6Q7Z6E9 1792 aaKnown RBP21.5■■□□□ 1.03
PDLIM3-202ENST00000284770 CYP3A4P08684 503 aa21.49■■□□□ 1.03
PDLIM3-202ENST00000284770 PTGDRQ13258 359 aa21.49■■□□□ 1.03
PDLIM3-202ENST00000284770 FAM110CQ1W6H9 321 aa21.49■■□□□ 1.03
PDLIM3-202ENST00000284770 REM2Q8IYK8 340 aaPredicted RBP21.49■■□□□ 1.03
PDLIM3-202ENST00000284770 JMYQ8N9B5 988 aa21.49■■□□□ 1.03
PDLIM3-202ENST00000284770 TAAR1Q96RJ0 339 aa21.49■■□□□ 1.03
PDLIM3-202ENST00000284770 RPTORQ8N122 1335 aa21.49■■□□□ 1.03
PDLIM3-202ENST00000284770 GCFC2P16383 781 aaKnown RBP21.48■■□□□ 1.03
PDLIM3-202ENST00000284770 MARCKSP29966 332 aaPredicted RBP21.48■■□□□ 1.03
PDLIM3-202ENST00000284770 ME1P48163 572 aa21.48■■□□□ 1.03
PDLIM3-202ENST00000284770 ATP2C1P98194 919 aaPredicted RBP21.48■■□□□ 1.03
PDLIM3-202ENST00000284770 MOXD1Q6UVY6 613 aa21.48■■□□□ 1.03
PDLIM3-202ENST00000284770 C4orf32Q8N8J7 132 aa21.48■■□□□ 1.03
PDLIM3-202ENST00000284770 R3HDMLQ9H3Y0 253 aa21.48■■□□□ 1.03
PDLIM3-202ENST00000284770 PCDHA7Q9UN72 937 aa21.48■■□□□ 1.03
PDLIM3-202ENST00000284770 CYP3A7-CYP3A51PA0A087WV96 503 aa21.48■■□□□ 1.03
PDLIM3-202ENST00000284770 AOC2O75106 756 aa21.48■■□□□ 1.03
PDLIM3-202ENST00000284770 CYP3A7P24462 503 aa21.48■■□□□ 1.03
PDLIM3-202ENST00000284770 PORCNQ9H237 461 aa21.48■■□□□ 1.03
PDLIM3-202ENST00000284770 ZFYVE28Q9HCC9 887 aa21.48■■□□□ 1.03
PDLIM3-202ENST00000284770 LAD1O00515 517 aa21.47■■□□□ 1.03
PDLIM3-202ENST00000284770 NEMFO60524 1076 aa21.47■■□□□ 1.03
PDLIM3-202ENST00000284770 TLR2O60603 784 aa21.47■■□□□ 1.03
PDLIM3-202ENST00000284770 TDP2O95551 362 aa21.47■■□□□ 1.03
PDLIM3-202ENST00000284770 CIITAP33076 1130 aa21.47■■□□□ 1.03
PDLIM3-202ENST00000284770 RMDN3Q96TC7 470 aa21.47■■□□□ 1.03
PDLIM3-202ENST00000284770 EFCC1Q9HA90 598 aa21.47■■□□□ 1.03
PDLIM3-202ENST00000284770 FRMPD4Q14CM0 1322 aa21.47■■□□□ 1.03
PDLIM3-202ENST00000284770 GOLGA6L4A6NEF3 574 aa21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 ALDH1A1P00352 501 aa21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 BCRP11274 1271 aa21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 MBOAT7Q96N66 472 aa21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 PURBQ96QR8 312 aaKnown RBP21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 PXMP2Q9NR77 195 aa21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 CPA4Q9UI42 421 aa21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 MRVI1Q9Y6F6 885 aa21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 MYH7BA7E2Y1 1941 aa21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 PTPREP23469 700 aa21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 UBXN2AP68543 259 aa21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 KCTD2Q14681 263 aa21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 ARHGEF16Q5VV41 709 aa21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 ARL6IP4Q66PJ3 421 aaKnown RBP21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 ADALQ6DHV7 355 aa21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 KRI1Q8N9T8 703 aaKnown RBP21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 TMEM60Q9H2L4 133 aa21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 DDX25Q9UHL0 483 aaKnown RBP21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 FBXO2Q9UK22 296 aaPredicted RBP21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 SRPRBQ9Y5M8 271 aaKnown RBP21.46■■□□□ 1.03
PDLIM3-202ENST00000284770 CA12O43570 354 aa21.45■■□□□ 1.02
PDLIM3-202ENST00000284770 SLC37A4O43826 429 aa21.45■■□□□ 1.02
PDLIM3-202ENST00000284770 FCER1AP12319 257 aa21.45■■□□□ 1.02
PDLIM3-202ENST00000284770 AXDND1Q5T1B0 1012 aaPredicted RBP21.45■■□□□ 1.02
PDLIM3-202ENST00000284770 WDR78Q5VTH9 848 aa21.45■■□□□ 1.02
PDLIM3-202ENST00000284770 C17orf99Q6UX52 265 aa21.45■■□□□ 1.02
PDLIM3-202ENST00000284770 CCAR1Q8IX12 1150 aaKnown RBP21.45■■□□□ 1.02
PDLIM3-202ENST00000284770 NSUN6Q8TEA1 469 aaKnown RBP21.45■■□□□ 1.02
PDLIM3-202ENST00000284770 FERMT2Q96AC1 680 aa21.45■■□□□ 1.02
PDLIM3-202ENST00000284770 MMP19Q99542 508 aa21.45■■□□□ 1.02
PDLIM3-202ENST00000284770 FAM86B1E9PN63 330 aa21.44■■□□□ 1.02
PDLIM3-202ENST00000284770 FAM86B2P0C5J1 330 aa21.44■■□□□ 1.02
PDLIM3-202ENST00000284770 EIF2AK2P19525 551 aaKnown RBP21.44■■□□□ 1.02
PDLIM3-202ENST00000284770 ZNF76P36508 570 aa21.44■■□□□ 1.02
PDLIM3-202ENST00000284770 CRHR2Q13324 411 aa21.44■■□□□ 1.02
PDLIM3-202ENST00000284770 PGM5Q15124 567 aa21.44■■□□□ 1.02
PDLIM3-202ENST00000284770 Q4G0T1 1027 aa21.44■■□□□ 1.02
PDLIM3-202ENST00000284770 PCNX4Q63HM2 1172 aa21.44■■□□□ 1.02
PDLIM3-202ENST00000284770 CAVIN1Q6NZI2 390 aaKnown RBP21.44■■□□□ 1.02
PDLIM3-202ENST00000284770 POTEDQ86YR6 584 aa21.44■■□□□ 1.02
PDLIM3-202ENST00000284770 DNERQ8NFT8 737 aa21.44■■□□□ 1.02
PDLIM3-202ENST00000284770 PDCD2LQ9BRP1 358 aa21.44■■□□□ 1.02
PDLIM3-202ENST00000284770 POTEB2H3BUK9 544 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 CUTAO60888 179 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 MAP2K2P36507 400 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 PRPHP41219 470 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 GZF1Q9H116 711 aaPredicted RBP21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 A0A1W2PQ27 194 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 A0A1W2PQ64 194 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 A0A1W2PQD8 194 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 STRNO43815 780 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 OR52Z1P0C646 297 aa21.43■■□□□ 1.02
PDLIM3-202ENST00000284770 MAPK4P31152 587 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms