RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 ZNF609O15014 1411 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 H7C1W4 665 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 TEX28O15482 410 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 GFPT2O94808 682 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 LDHBP07195 334 aaKnown RBP9.22□□□□□ -0.93
SPARC-201ENST00000231061 DNAJA1P31689 397 aaKnown RBP9.22□□□□□ -0.93
SPARC-201ENST00000231061 ZNF165P49910 485 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 APOBRQ0VD83 1088 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 KIAA1614Q5VZ46 1190 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 JPH3Q8WXH2 748 aaPredicted RBP9.22□□□□□ -0.93
SPARC-201ENST00000231061 SLC39A13Q96H72 371 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 SNRKQ9NRH2 765 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 KRT82Q9NSB4 513 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 MYO6Q9UM54 1294 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 LUC7L2Q9Y383 392 aaKnown RBP9.22□□□□□ -0.93
SPARC-201ENST00000231061 FAPQ12884 760 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 KRT27Q7Z3Y8 459 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 NOP9Q86U38 636 aaKnown RBP9.22□□□□□ -0.93
SPARC-201ENST00000231061 GRAMD2AQ8IUY3 354 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 NPLOC4Q8TAT6 608 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 AATFQ9NY61 560 aaKnown RBP eCLIP9.22□□□□□ -0.93
SPARC-201ENST00000231061 TSKSQ9UJT2 592 aa9.22□□□□□ -0.93
SPARC-201ENST00000231061 KDM6AO15550 1401 aaPredicted RBP9.22□□□□□ -0.93
SPARC-201ENST00000231061 AGR2O95994 175 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 FDX1P10109 184 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 BTF3P20290 206 aaKnown RBP9.21□□□□□ -0.93
SPARC-201ENST00000231061 UBA7P41226 1012 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 RFX5P48382 616 aaPredicted RBP9.21□□□□□ -0.93
SPARC-201ENST00000231061 MXI1P50539 228 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 COPAP53621 1224 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 RESTQ13127 1097 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 CHST3Q7LGC8 479 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 SMYD1Q8NB12 490 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 KIAA1524Q8TCG1 905 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 LPIN2Q92539 896 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 PGBD1Q96JS3 809 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 COL15A1P39059 1388 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 IFRD1O00458 451 aaPredicted RBP9.21□□□□□ -0.93
SPARC-201ENST00000231061 CHKAP35790 457 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 LMAN1P49257 510 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 TIMM10P62072 90 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 SMAD4Q13485 552 aaKnown RBP9.21□□□□□ -0.93
SPARC-201ENST00000231061 BTG3Q14201 252 aaPredicted RBP9.21□□□□□ -0.93
SPARC-201ENST00000231061 INAQ16352 499 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 RC3H1Q5TC82 1133 aaKnown RBP9.21□□□□□ -0.93
SPARC-201ENST00000231061 DAAM2Q86T65 1068 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 FTOQ9C0B1 505 aaKnown RBP eCLIP9.21□□□□□ -0.93
SPARC-201ENST00000231061 STK39Q9UEW8 545 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.21□□□□□ -0.93
SPARC-201ENST00000231061 KIAA1257Q9ULG3 409 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 PAIP2BQ9ULR5 123 aaKnown RBP9.21□□□□□ -0.93
SPARC-201ENST00000231061 SLC4A4Q9Y6R1 1079 aa9.21□□□□□ -0.93
SPARC-201ENST00000231061 PTPDC1A2A3K4 754 aa9.21□□□□□ -0.94
SPARC-201ENST00000231061 SPDYE16A6NNV3 312 aaPredicted RBP9.21□□□□□ -0.94
SPARC-201ENST00000231061 POM121CA8CG34 1229 aa9.21□□□□□ -0.94
SPARC-201ENST00000231061 KCNJ13O60928 360 aa9.21□□□□□ -0.94
SPARC-201ENST00000231061 DDX5P17844 614 aaKnown RBP9.21□□□□□ -0.94
SPARC-201ENST00000231061 LRMPQ12912 555 aa9.21□□□□□ -0.94
SPARC-201ENST00000231061 TTLL12Q14166 644 aaPredicted RBP9.21□□□□□ -0.94
SPARC-201ENST00000231061 CNGA3Q16281 694 aa9.21□□□□□ -0.94
SPARC-201ENST00000231061 PKN2Q16513 984 aaKnown RBP9.21□□□□□ -0.94
SPARC-201ENST00000231061 SLC30A9Q6PML9 568 aa9.21□□□□□ -0.94
SPARC-201ENST00000231061 TADA2BQ86TJ2 420 aa9.21□□□□□ -0.94
SPARC-201ENST00000231061 KBTBD3Q8NAB2 608 aa9.21□□□□□ -0.94
SPARC-201ENST00000231061 CCDC150Q8NCX0 1101 aa9.21□□□□□ -0.94
SPARC-201ENST00000231061 GFM2Q969S9 779 aaKnown RBP9.21□□□□□ -0.94
SPARC-201ENST00000231061 YIPF3Q9GZM5 350 aa9.21□□□□□ -0.94
SPARC-201ENST00000231061 ZSCAN16Q9H4T2 348 aaPredicted RBP9.21□□□□□ -0.94
SPARC-201ENST00000231061 NCOA5Q9HCD5 579 aaKnown RBP9.21□□□□□ -0.94
SPARC-201ENST00000231061 SPTLC3Q9NUV7 552 aa9.21□□□□□ -0.94
SPARC-201ENST00000231061 PAG1Q9NWQ8 432 aa9.21□□□□□ -0.94
SPARC-201ENST00000231061 TUBGCP4Q9UGJ1 667 aa9.21□□□□□ -0.94
SPARC-201ENST00000231061 ZNF254O75437 659 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 PNMA6AP0CW24 399 aaPredicted RBP9.2□□□□□ -0.94
SPARC-201ENST00000231061 GZMAP12544 262 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 IDEP14735 1019 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 NFKBIAP25963 317 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 SCNN1AP37088 669 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 AP2B1P63010 937 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 RBM20Q5T481 1227 aaKnown RBP9.2□□□□□ -0.94
SPARC-201ENST00000231061 USPL1Q5W0Q7 1092 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 DSTYKQ6XUX3 929 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 LRRC49Q8IUZ0 686 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 NBPF15Q8N660 670 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 C8orf48Q96LL4 319 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 NSRP1Q9H0G5 558 aaKnown RBP9.2□□□□□ -0.94
SPARC-201ENST00000231061 ZBTB3Q9H5J0 574 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 ARGLU1Q9NWB6 273 aaPredicted RBP9.2□□□□□ -0.94
SPARC-201ENST00000231061 BECN2A8MW95 431 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 STMND1H3BQB6 276 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 EPN2O95208 641 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 CNGA1P29973 690 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 SYCP1Q15431 976 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 LRRFIP1Q32MZ4 808 aaKnown RBP9.2□□□□□ -0.94
SPARC-201ENST00000231061 STOX1Q6ZVD7 989 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 GALNT6Q8NCL4 622 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 DCAF5Q96JK2 942 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 NR1H4Q96RI1 486 aaPredicted RBP9.2□□□□□ -0.94
SPARC-201ENST00000231061 QPCTLQ9NXS2 382 aa9.2□□□□□ -0.94
SPARC-201ENST00000231061 A0A1B0GVG6 124 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms