RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 RMDN3Q96TC7 470 aa15.06■□□□□ 0
TIMP1-201ENST00000218388 FOXP1Q9H334 677 aaPredicted RBP15.06■□□□□ 0
TIMP1-201ENST00000218388 SRRDQ9UH36 339 aa15.06■□□□□ 0
TIMP1-201ENST00000218388 PCDHA6Q9UN73 950 aa15.06■□□□□ 0
TIMP1-201ENST00000218388 PCDHA8Q9Y5H6 950 aa15.06■□□□□ 0
TIMP1-201ENST00000218388 LCTP09848 1927 aa15.05■□□□□ 0
TIMP1-201ENST00000218388 ASB14A6NK59 587 aa15.05■□□□□ -0
TIMP1-201ENST00000218388 COBLO75128 1261 aa15.05■□□□□ -0
TIMP1-201ENST00000218388 FLT3LGP49771 235 aa15.05■□□□□ -0
TIMP1-201ENST00000218388 LBX1P52954 281 aa15.05■□□□□ -0
TIMP1-201ENST00000218388 CNTN2Q02246 1040 aa15.05■□□□□ -0
TIMP1-201ENST00000218388 PRKCZQ05513 592 aa15.05■□□□□ -0
TIMP1-201ENST00000218388 ZNF792Q3KQV3 632 aa15.05■□□□□ -0
TIMP1-201ENST00000218388 ZNF467Q7Z7K2 595 aaPredicted RBP15.05■□□□□ -0
TIMP1-201ENST00000218388 MSL3Q8N5Y2 521 aaKnown RBP15.05■□□□□ -0
TIMP1-201ENST00000218388 USP6NLQ92738 828 aa15.05■□□□□ -0
TIMP1-201ENST00000218388 IWS1Q96ST2 819 aa15.05■□□□□ -0
TIMP1-201ENST00000218388 ANO3Q9BYT9 981 aa15.05■□□□□ -0
TIMP1-201ENST00000218388 GJD2Q9UKL4 321 aa15.05■□□□□ -0
TIMP1-201ENST00000218388 TRIM17Q9Y577 477 aa15.05■□□□□ -0
TIMP1-201ENST00000218388 FRMPD4Q14CM0 1322 aa15.04■□□□□ -0
TIMP1-201ENST00000218388 BTBD18B2RXH4 712 aa15.04■□□□□ -0
TIMP1-201ENST00000218388 M0R2N6 131 aa15.04■□□□□ -0
TIMP1-201ENST00000218388 XRCC5P13010 732 aaKnown RBP15.04■□□□□ -0
TIMP1-201ENST00000218388 CYP2B6P20813 491 aa15.04■□□□□ -0
TIMP1-201ENST00000218388 ALDH5A1P51649 535 aaPredicted RBP15.04■□□□□ -0
TIMP1-201ENST00000218388 IRF5Q13568 498 aa15.04■□□□□ -0
TIMP1-201ENST00000218388 NONOQ15233 471 aaKnown RBP eCLIP15.04■□□□□ -0
TIMP1-201ENST00000218388 RAET1EQ8TD07 263 aa15.04■□□□□ -0
TIMP1-201ENST00000218388 RASGRP4Q8TDF6 673 aa15.04■□□□□ -0
TIMP1-201ENST00000218388 TAAR1Q96RJ0 339 aa15.04■□□□□ -0
TIMP1-201ENST00000218388 PXMP2Q9NR77 195 aa15.04■□□□□ -0
TIMP1-201ENST00000218388 TMEM260Q9NX78 707 aa15.04■□□□□ -0
TIMP1-201ENST00000218388 COL20A1Q9P218 1284 aa15.04■□□□□ -0
TIMP1-201ENST00000218388 CEP350Q5VT06 3117 aa15.03■□□□□ -0
TIMP1-201ENST00000218388 RPTORQ8N122 1335 aa15.03■□□□□ -0
TIMP1-201ENST00000218388 SOWAHBA6NEL2 793 aa15.03■□□□□ -0
TIMP1-201ENST00000218388 EIF2AK2P19525 551 aaKnown RBP15.03■□□□□ -0
TIMP1-201ENST00000218388 CCND2P30279 289 aa15.03■□□□□ -0
TIMP1-201ENST00000218388 NR5A1Q13285 461 aa15.03■□□□□ -0
TIMP1-201ENST00000218388 OLFML2BQ68BL8 750 aa15.03■□□□□ -0
TIMP1-201ENST00000218388 XRRA1Q6P2D8 792 aa15.03■□□□□ -0
TIMP1-201ENST00000218388 PIK3AP1Q6ZUJ8 805 aa15.03■□□□□ -0
TIMP1-201ENST00000218388 OTOP1Q7RTM1 612 aa15.03■□□□□ -0
TIMP1-201ENST00000218388 NOSTRINQ8IVI9 506 aa15.03■□□□□ -0
TIMP1-201ENST00000218388 OXER1Q8TDS5 423 aa15.03■□□□□ -0
TIMP1-201ENST00000218388 MAML3Q96JK9 1138 aa15.03■□□□□ -0
TIMP1-201ENST00000218388 PDCD2LQ9BRP1 358 aa15.03■□□□□ -0
TIMP1-201ENST00000218388 NOL7Q9UMY1 257 aaKnown RBP15.03■□□□□ -0
TIMP1-201ENST00000218388 GABRQQ9UN88 632 aa15.03■□□□□ -0
TIMP1-201ENST00000218388 SYNGAP1Q96PV0 1343 aa15.02■□□□□ -0
TIMP1-201ENST00000218388 STAM2O75886 525 aa15.02■□□□□ -0
TIMP1-201ENST00000218388 U2AF2P26368 475 aaKnown RBP eCLIP15.02■□□□□ -0
TIMP1-201ENST00000218388 SREBF1P36956 1147 aa15.02■□□□□ -0
TIMP1-201ENST00000218388 NUCB2P80303 420 aa15.02■□□□□ -0
TIMP1-201ENST00000218388 PDE4DQ08499 809 aa15.02■□□□□ -0
TIMP1-201ENST00000218388 PGM5Q15124 567 aa15.02■□□□□ -0
TIMP1-201ENST00000218388 BRAPQ7Z569 592 aa15.02■□□□□ -0
TIMP1-201ENST00000218388 CTU1Q7Z7A3 348 aaKnown RBP15.02■□□□□ -0
TIMP1-201ENST00000218388 NPLOC4Q8TAT6 608 aa15.02■□□□□ -0
TIMP1-201ENST00000218388 TNFRSF25Q93038 417 aa15.02■□□□□ -0
TIMP1-201ENST00000218388 PGBD1Q96JS3 809 aa15.02■□□□□ -0
TIMP1-201ENST00000218388 PURBQ96QR8 312 aaKnown RBP15.02■□□□□ -0
TIMP1-201ENST00000218388 NAP1L4Q99733 375 aaKnown RBP15.02■□□□□ -0
TIMP1-201ENST00000218388 ZSCAN16Q9H4T2 348 aaPredicted RBP15.02■□□□□ -0
TIMP1-201ENST00000218388 MTMR6Q9Y217 621 aa15.02■□□□□ -0
TIMP1-201ENST00000218388 MYH7BA7E2Y1 1941 aa15.02□□□□□ -0.01
TIMP1-201ENST00000218388 NR3C2P08235 984 aa15.01□□□□□ -0.01
TIMP1-201ENST00000218388 ZSCAN22P10073 491 aaPredicted RBP15.01□□□□□ -0.01
TIMP1-201ENST00000218388 USP11P51784 963 aa15.01□□□□□ -0.01
TIMP1-201ENST00000218388 ARHGAP4P98171 946 aa15.01□□□□□ -0.01
TIMP1-201ENST00000218388 CAP1Q01518 475 aa15.01□□□□□ -0.01
TIMP1-201ENST00000218388 STXBP2Q15833 593 aa15.01□□□□□ -0.01
TIMP1-201ENST00000218388 MFSD14CQ5VZR4 134 aa15.01□□□□□ -0.01
TIMP1-201ENST00000218388 PCNX4Q63HM2 1172 aa15.01□□□□□ -0.01
TIMP1-201ENST00000218388 MAMDC4Q6UXC1 1216 aa15.01□□□□□ -0.01
TIMP1-201ENST00000218388 SLAIN1Q8ND83 568 aa15.01□□□□□ -0.01
TIMP1-201ENST00000218388 PXYLP1Q8TE99 480 aa15.01□□□□□ -0.01
TIMP1-201ENST00000218388 TBCKQ8TEA7 893 aa15.01□□□□□ -0.01
TIMP1-201ENST00000218388 FGD4Q96M96 766 aa15.01□□□□□ -0.01
TIMP1-201ENST00000218388 TINF2Q9BSI4 451 aa15.01□□□□□ -0.01
TIMP1-201ENST00000218388 PRDM10Q9NQV6 1147 aa15.01□□□□□ -0.01
TIMP1-201ENST00000218388 CIZ1Q9ULV3 898 aaPredicted RBP15.01□□□□□ -0.01
TIMP1-201ENST00000218388 ASTN1O14525 1302 aa15□□□□□ -0.01
TIMP1-201ENST00000218388 KIF28PB7ZC32 967 aa15□□□□□ -0.01
TIMP1-201ENST00000218388 ADAMTS3O15072 1205 aa15□□□□□ -0.01
TIMP1-201ENST00000218388 ADCY3O60266 1144 aa15□□□□□ -0.01
TIMP1-201ENST00000218388 CYP3A4P08684 503 aa15□□□□□ -0.01
TIMP1-201ENST00000218388 MYCLP12524 364 aaPredicted RBP15□□□□□ -0.01
TIMP1-201ENST00000218388 EDNRBP24530 442 aa15□□□□□ -0.01
TIMP1-201ENST00000218388 ZNF76P36508 570 aa15□□□□□ -0.01
TIMP1-201ENST00000218388 TRAPPC10P48553 1259 aa15□□□□□ -0.01
TIMP1-201ENST00000218388 UBXN2AP68543 259 aa15□□□□□ -0.01
TIMP1-201ENST00000218388 PKN2Q16513 984 aaKnown RBP15□□□□□ -0.01
TIMP1-201ENST00000218388 INF2Q27J81 1249 aa15□□□□□ -0.01
TIMP1-201ENST00000218388 GNPTABQ3T906 1256 aa15□□□□□ -0.01
TIMP1-201ENST00000218388 ARMCX2Q7L311 632 aa15□□□□□ -0.01
TIMP1-201ENST00000218388 NEK8Q86SG6 692 aa15□□□□□ -0.01
TIMP1-201ENST00000218388 MORC4Q8TE76 937 aa15□□□□□ -0.01
TIMP1-201ENST00000218388 CNPY2Q9Y2B0 182 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms