RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Carmil2Q3V3V9 1296 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Tshz1Q5DTH5 1084 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Krt14Q61781 484 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Cep70Q6IQY5 616 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Trim66Q924W6 1242 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Stk32bQ9JJX8 414 aa10.06□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Neurl4Q5NCX5 1563 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Pik3caP42337 1068 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Rnf207Q3V3A7 635 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Pja2Q80U04 707 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Rgs22G3UYX5 1258 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Taok1Q5F2E8 1001 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 RilpQ5ND29 369 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Clec16aQ80U30 1036 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Pus7lQ8CE46 702 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 RabggtaQ9JHK4 567 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Cbx8Q9QXV1 362 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Sh2d4bA6X942 431 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Rtel1Q0VGM9 1203 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Wdr44Q6NVE8 915 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 HomezQ80W88 542 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ushbp1Q8R370 680 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Mgea5Q9EQQ9 916 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Capn10Q9ESK3 666 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Apol6B7ZC55 329 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Rsbn1lD3Z0K6 821 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 GssP51855 474 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Fam47cQ14BE7 430 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Gm1604bQ3TRG0 118 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Krt74Q6IFZ9 495 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Haus7Q8BKT8 364 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Eif4a3Q91VC3 411 aaKnown RBP10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Dynll2Q9D0M5 89 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Nr2e3Q9QXZ7 395 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Cacna2d3Q9Z1L5 1091 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Lrrc32G3XA59 663 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Kif5aP33175 1027 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Sept1P42209 366 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Serpinb1cQ5SV42 375 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Znf507Q6ZPY5 941 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Snrnp35Q9D384 244 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Serpinb12Q9D7P9 423 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Gtf2iQ9ESZ8 998 aaKnown RBP10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 JmyQ9QXM1 983 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Grin2dQ03391 1323 aa10.05□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Gm11985A0A1B0GS61 206 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Krt90E9Q1Z0 538 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Birc2Q62210 612 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Clca2Q8BG22 942 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 CnstQ8CBC4 711 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Gpr108Q91WD0 569 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 KynuQ9CXF0 464 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Col20a1Q923P0 1320 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Xrn1P97789 1719 aaKnown RBP10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Gm6121L7MUF1 212 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Slc27a3O88561 667 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Adssl1P28650 457 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 DSCC1Q14AI0 399 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Gucy2cQ3UWA6 1072 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Trim21Q62191 470 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Sh3gl3Q62421 347 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Myo6Q64331 1265 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Taok3Q8BYC6 898 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Inpp5fQ8CDA1 1132 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Psip1Q99JF8 528 aaKnown RBP10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Stag1Q9D3E6 1258 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ehd4Q9EQP2 541 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Becn2P0DM65 447 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Il7P10168 154 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Hps5P59438 1126 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Slc38a10Q5I012 1090 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ccdc85aQ5SP85 500 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Skiv2lQ6NZR5 1244 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Eef1gQ9D8N0 437 aaKnown RBP10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Nlrp5Q9R1M5 1163 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Syndig1A2ANU3 258 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Nmt2O70311 529 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Rbbp5Q8BX09 538 aaKnown RBP10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Vmn1r199Q8R280 367 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Slc26a7Q8R2Z3 656 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Nup58Q8R332 587 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 EcsitQ9QZH6 435 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 DexiQ9WUQ7 95 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Glt1d1A4FUP9 346 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Rbm15bQ6PHZ5 887 aaKnown RBP10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Krt9Q6RHW0 743 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Pank4Q80YV4 820 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Fam161bQ8CB59 589 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Gtpbp10Q8K013 366 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 St13Q99L47 371 aaKnown RBP10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ola1Q9CZ30 396 aaKnown RBP10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 4930449I24RikQ9D5E3 319 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Cxcl11Q9JHH5 100 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Acad12D3Z7X0 555 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Ap1g2O88512 791 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Stmn2P55821 179 aa10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Fam207aP58468 219 aaKnown RBP10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Pspc1Q8R326 523 aaKnown RBP10.04□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Trove2O08848 538 aa10.03□□□□□ -0.8
Scn8a-213ENSMUST00000201549 Il15P48346 162 aa10.03□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms