RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 Znf568E9PYI1 671 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Zc3h7bF8VPP8 982 aaKnown RBP12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 AoahO35298 574 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Ptgs1P22437 602 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Acot10Q32MW3 439 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Pls1Q3V0K9 630 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Tmprss11eQ5S248 423 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Rgl1Q60695 768 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Kif5bQ61768 963 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Eif3j2Q66JS6 263 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Atp5c1Q91VR2 298 aaKnown RBP12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Syce1Q9D495 329 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Vav3Q9R0C8 847 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Ddx23D3Z0M9 819 aaKnown RBP12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Gm4307E9PZY4 289 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Gm4312K9J7E2 289 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 GpiP06745 558 aaKnown RBP12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Nf2P46662 596 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Nol4P60954 483 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Nab2Q61127 525 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Pcdha7Q91Y13 937 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Abhd2Q9QXM0 425 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Gm5934D3Z4U6 212 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Sox5P35710 763 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Mmp20P57748 482 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Zc3h15Q3TIV5 426 aaKnown RBP12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Foxn3Q499D0 457 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Adam6bQ6IMH7 756 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Hirip3Q8BLH7 601 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Gjd4Q8BSD4 364 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Brd3Q8K2F0 726 aaKnown RBP12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Txndc5Q91W90 417 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Ascc2Q91WR3 749 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 F11Q91Y47 624 aa12.11□□□□□ -0.47
Lig3-210ENSMUST00000173347 Scn3aA2ASI5 1947 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Nlrx1Q3TL44 975 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Trpc6Q61143 930 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Setdb2Q8C267 713 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Ano2Q8CFW1 1002 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Tmem134Q8R0J4 195 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 BaatQ91X34 420 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Arhgef25Q9CWR0 618 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Dnajb6O54946 365 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Fgfr2P21803 821 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Siah1bQ06985 282 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Olfr121Q5CZY0 321 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Cnot7Q60809 285 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Yars2Q8BYL4 472 aaKnown RBP12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 MymkQ9D1N4 221 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Prl2c5Q9JLV9 222 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Tjp3Q9QXY1 905 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Pdcd6ipQ9WU78 869 aaKnown RBP12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Tnip1Q9WUU8 647 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Myo1aO88329 1043 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Hoxa11P31311 313 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Tpm1P58771 284 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Gpatch11Q3UFS4 262 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Ddx19bQ8BZY3 494 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Acat1Q8QZT1 424 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Nr3c2Q8VII8 978 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Dhx30Q99PU8 1217 aaKnown RBP12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 NkapQ9D0F4 415 aaKnown RBP12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 Ccdc105Q9D4K7 499 aa12.1□□□□□ -0.47
Lig3-210ENSMUST00000173347 XdhQ00519 1335 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Scgb2b18A0A087WPA9 112 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Rfpl4bJ3QPR6 266 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Pip4k2aO70172 405 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Stat3P42227 770 aaKnown RBP12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Islr2Q5RKR3 745 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Panx2Q6IMP4 677 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Smarca1Q6PGB8 1046 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Tmem63cQ8CBX0 802 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Mtmr6Q8VE11 617 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 CenpqQ9CPQ5 267 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Serpinb12Q9D7P9 423 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Copb1Q9JIF7 953 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 AmfrQ9R049 643 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Cry2Q9R194 592 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Diaph1O08808 1255 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Mettl14Q3UIK4 456 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Tbx2Q60707 711 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Dnm3Q8BZ98 863 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 FktnQ8R507 461 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Kremen1Q99N43 473 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Rhobtb3Q9CTN4 611 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Pabpc6Q9D4E6 643 aaKnown RBP12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Tpm2P58774 284 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Igbp1Q61249 340 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Sez6lQ6P1D5 963 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Rexo1Q7TT28 1213 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Thap3Q8BJ25 218 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Rasal3Q8C2K5 1041 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Haus2Q9CQS9 234 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Lypla2Q9WTL7 231 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Eif2ak1Q9Z2R9 619 aa12.09□□□□□ -0.47
Lig3-210ENSMUST00000173347 Gm15448F6PZL4 682 aa12.08□□□□□ -0.48
Lig3-210ENSMUST00000173347 Irf6P97431 467 aa12.08□□□□□ -0.48
Lig3-210ENSMUST00000173347 CnstQ8CBC4 711 aa12.08□□□□□ -0.48
Lig3-210ENSMUST00000173347 Tgs1Q923W1 853 aa12.08□□□□□ -0.48
Lig3-210ENSMUST00000173347 Ddah1Q9CWS0 285 aa12.08□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms