RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Msantd4Q91YU3 345 aa12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Ube2sQ921J4 223 aa12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Rcan1Q9JHG6 198 aa12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Clip2Q9Z0H8 1047 aa12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Cd44P15379 778 aa12.65□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Hsd17b1P51656 344 aa12.65□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Ssrp1Q08943 708 aaKnown RBP12.65□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Tmem35bQ3U0Y2 150 aa12.65□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Tlr11Q6R5P0 926 aa12.65□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Susd4Q8BH32 490 aa12.65□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Lrrc41Q8K1C9 807 aa12.65□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 March8Q9DBD2 286 aa12.65□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Tnrc6cQ3UHC0 1690 aaKnown RBP12.65□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Apol6B7ZC55 329 aa12.65□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Nfil3O08750 462 aa12.65□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Trove2O08848 538 aa12.65□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Men1O88559 611 aaKnown RBP12.65□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Mum1l1Q4VA55 681 aa12.65□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Sh3gl2Q62420 352 aa12.65□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Hook2Q7TMK6 716 aa12.65□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Slc39a11Q8BWY7 342 aa12.65□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Gimap7Q8R379 293 aa12.65□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Gm28919A0A087WP35 240 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Plekhd1B2RPU2 505 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Zfp275G3X904 499 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 SarsP26638 512 aaKnown RBP12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Sstr3P30935 428 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Man1a2P39098 641 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Gnat2P50149 354 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Aak1Q3UHJ0 959 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Cd37Q61470 281 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Ncapg2Q6DFV1 1138 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Rbm15bQ6PHZ5 887 aaKnown RBP12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Klhl7Q8BUL5 586 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Stap2Q8R0L1 411 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Ccdc80Q8R2G6 949 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Trub2Q91WG3 331 aaKnown RBP12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Tsnaxip1Q99P25 704 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 RpainQ9CWY9 219 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 2310002L09RikQ9D7L5 217 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Eif4enif1Q9EST3 983 aaKnown RBP12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Lrp6O88572 1613 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 NesQ6P5H2 1864 aaKnown RBP12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Gm28510A0A087WP28 240 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Clcn6O35454 870 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Fam83bQ0VBM2 1012 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Slc9a2Q3ZAS0 814 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Ehmt1Q5DW34 1296 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Q8BWG4 1187 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Prl7b1Q8CGZ9 251 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Ubxn6Q99PL6 442 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Rpf2Q9JJ80 306 aaKnown RBP12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Ecm29Q6PDI5 1840 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 AfdnQ9QZQ1 1820 aaKnown RBP12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Cyp2c23E9Q5K4 494 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Cacna2d1O08532 1103 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Kcna1P16388 495 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Ptpn12P35831 775 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Snrpa1P57784 255 aaKnown RBP12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 HmmrQ00547 794 aaKnown RBP12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Nr1d1Q3UV55 615 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Znf827Q505G8 1078 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Sik1Q60670 779 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Ublcp1Q8BGR9 318 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Rassf2Q8BMS9 326 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Fsip1Q9D3V5 435 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Nr2e3Q9QXZ7 395 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Coro1cQ9WUM4 474 aa12.64□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Gm1993A6X8I0 212 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 SlxD3Z347 212 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Slc30a9Q5IRJ6 567 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Ces1eQ64176 562 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Tsga10Q6NY15 697 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Mtss1lQ6P9S0 715 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Smim5Q8BT42 78 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Mmgt1Q8K273 131 aaKnown RBP12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Gle1Q8R322 699 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Olfr805Q8VFI4 319 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Mmtag2Q99LX5 260 aaKnown RBP12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Psma7Q9Z2U0 248 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Homer1Q9Z2Y3 366 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Abca15E9PWH4 1668 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Herc3A6H6S0 1050 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Tal1P22091 329 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Traf3ip1Q149C2 625 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 EregQ61521 162 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Mapk6Q61532 720 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Ddx3xQ62167 662 aaKnown RBP12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Alg1Q921Q3 482 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 PigoQ9JJI6 1093 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Gkap1Q9JMB0 366 aa12.63□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Myh8P13542 1937 aa12.62□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Guca2bO09051 106 aa12.62□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Stat5bP42232 786 aa12.62□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Ano9P86044 747 aa12.62□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Trim37Q6PCX9 961 aa12.62□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Naa35Q6PHQ8 725 aa12.62□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 Fnbp1Q80TY0 616 aa12.62□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 IntS13Q8QZV7 732 aa12.62□□□□□ -0.39
Prpf40b-208ENSMUST00000136980 BlmhQ8R016 455 aa12.62□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 119.5 ms