RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Ift74Q8BKE9 600 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Fam161bQ8CB59 589 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Srgap2Q91Z67 1071 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Alpk1Q9CXB8 1231 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Ssr1Q9CY50 286 aaKnown RBP13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Mis18aQ9CZJ6 204 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Mss51Q9D5Z5 446 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Cfap45Q9D9U9 551 aa13.64□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Bcorl1A2AQH4 1781 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Scgb2b18A0A087WPA9 112 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Apol7aB2RT54 418 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Zfpm1O35615 995 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Slc10a5Q5PT54 434 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Ccdc172Q810N9 267 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Tesk2Q8VCT9 570 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Cabp7Q91ZM8 215 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Pcdh11xF6ZNL5 1338 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Pak1O88643 545 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 GpiP06745 558 aaKnown RBP13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Sox5P35710 763 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 HrQ61645 1182 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Mrps31Q61733 384 aaKnown RBP13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Baiap3Q80TT2 1134 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Ccdc122Q8BVN0 290 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 NelfbQ8C4Y3 580 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Phc3Q8CHP6 981 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Tcp11l2Q8K1H7 517 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Trap1Q9CQN1 706 aaKnown RBP13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Dnajc19Q9CQV7 116 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Nfu1Q9QZ23 255 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Uchl5Q9WUP7 329 aa13.63□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Vsnl1P62761 191 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Kcnb1Q03717 857 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 ItgadQ3V0T4 1168 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Smarca1Q6PGB8 1046 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Tmem191cQ9JJB1 302 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Nme9A0A1L1SUL6 329 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 GabreA2AMW3 916 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Gm4307E9PZY4 289 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Gm4312K9J7E2 289 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Ap1g2O88512 791 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Msh3P13705 1091 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Capza3P70190 299 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Oxr1Q4KMM3 866 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Olfr121Q5CZY0 321 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Lrrc1Q80VQ1 524 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Erlin2Q8BFZ9 340 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Pdzph1Q8BGR1 1238 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Armc6Q8BNU0 468 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Ccdc186Q8C9S4 917 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Pcdha7Q91Y13 937 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 AvenQ9D9K3 342 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Cd274Q9EP73 290 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Capn15Q9JLG8 1095 aa13.62□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Ugt1a8D3Z748 530 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Ugt1a10E9PXN7 530 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Akr1c19G3X9Y6 323 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Mx1P09922 631 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Pla2g4eQ50L42 875 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Zfp446Q8C9M8 523 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Apol10aQ8CCA5 318 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Ppp1r3gQ9CW07 347 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 RpainQ9CWY9 219 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 SetQ9EQU5 289 aaKnown RBP13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Prl2c5Q9JLV9 222 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Dock2Q8C3J5 1828 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Cnbd1B1AWM0 430 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Ccdc24E9PUW8 296 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Copb2O55029 905 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Lmnb1P14733 588 aaKnown RBP13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Npr3P70180 536 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Ppp1r7Q3UM45 361 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Tigd5Q499M4 642 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Tbc1d9bQ5SVR0 1263 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 PigsQ6PD26 555 aaKnown RBP13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Vipas39Q8BGQ1 491 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 IarsQ8BU30 1262 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Arhgef19Q8BWA8 802 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Gpcpd1Q8C0L9 675 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Abhd2Q9QXM0 425 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Mybl2P48972 704 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Cct5P80316 541 aaKnown RBP13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Apba2P98084 750 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 CbarpQ66L44 698 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Krt87Q6IMF0 495 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Osbpl1aQ91XL9 950 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Klhl10Q9D5V2 608 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Krt34Q9D646 392 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Sorbs3Q9R1Z8 733 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Vstm4T1NXB5 319 aa13.61□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Rsbn1lD3Z0K6 821 aa13.6□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Eme2Q56A04 373 aa13.6□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Akap4Q60662 849 aa13.6□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Ccdc93Q7TQK5 629 aa13.6□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Dnph1Q80VJ3 173 aa13.6□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Rnf187Q8BFX1 236 aa13.6□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Krt82Q99M74 516 aa13.6□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Klhl40Q9D783 621 aa13.6□□□□□ -0.23
Vamp1-203ENSMUST00000100942 Styxl1Q9DAR2 321 aa13.6□□□□□ -0.23
Vamp1-203ENSMUST00000100942 SmapQ9R0P4 181 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms