RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Mrpl12Q9DB15 201 aaKnown RBP19.58■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Akap8Q9DBR0 687 aaKnown RBP19.58■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Cacna2d3Q9Z1L5 1091 aa19.58■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Apol8A2VDH7 339 aaKnown RBP19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Apol6B7ZC55 329 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 RalylQ8BTF8 293 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 E330017A01RikQ8BU47 192 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Klhl7Q8BUL5 586 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 GphnQ8BUV3 769 aaKnown RBP19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Wdr60Q8C761 999 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Rcor2Q8C796 523 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Trim9Q8C7M3 817 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Ufl1Q8CCJ3 793 aaKnown RBP19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Mettl13Q91YR5 698 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Fam133bQ9CVI2 245 aaKnown RBP19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Prpf4Q9DAW6 521 aaKnown RBP19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 EhhadhQ9DBM2 718 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Pkd2l2Q9JLG4 621 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Acot3Q9QYR7 432 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Orc1Q9Z1N2 840 aaKnown RBP19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Bpifb4A2BGH0 617 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Trim34bJ3QNR8 485 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Usp4P35123 962 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Sh3gl1Q62419 368 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Stambpl1Q76N33 436 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 QarsQ8BML9 775 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Farp2Q91VS8 1065 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Abcf2Q99LE6 628 aaKnown RBP19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Spata17Q9D552 379 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 March8Q9DBD2 286 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Gpaa1Q9WTK3 621 aa19.57■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Ncf2O70145 525 aa19.56■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Cd44P15379 778 aa19.56■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Tlr13Q6R5N8 991 aa19.56■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Zbed4Q80WQ9 1168 aa19.56■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Cnot10Q8BH15 744 aa19.56■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Scfd2Q8BTY8 684 aa19.56■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Mylk2Q8VCR8 613 aa19.56■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Rhobtb3Q9CTN4 611 aa19.56■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Armc9Q9D2I5 817 aa19.56■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Wdr72D3YYM4 1114 aa19.56■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Prl2c2P04095 224 aa19.56■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Ctnna1P26231 906 aaKnown RBP19.56■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Lrrfip1Q3UZ39 729 aaKnown RBP19.56■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Cyp7a1Q64505 503 aa19.56■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Brd2Q7JJ13 798 aaKnown RBP19.56■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Haus4Q8BFT2 363 aa19.56■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Gpcpd1Q8C0L9 675 aa19.56■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Lgi2Q8K4Z0 550 aa19.56■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Tmem132bF7BAB2 1078 aa19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 P4hbP09103 509 aaKnown RBP19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Stat4P42228 749 aa19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Iffo1Q8BXL9 562 aa19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Slc35f6Q8VE96 372 aa19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Fmnl1Q9JL26 1094 aa19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Tjp2Q9Z0U1 1167 aaKnown RBP19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Pitpnm2Q6ZPQ6 1335 aa19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Vmn2r71L7N2D8 855 aa19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Bnip3O55003 187 aa19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Chmp6P0C0A3 200 aa19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 D1Pas1P16381 660 aa19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Ercc5P35689 1170 aa19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Actn4P57780 912 aaKnown RBP19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Cacna2d4Q5RJF7 1116 aa19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Asap3Q5U464 904 aa19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Usp38Q8BW70 1042 aa19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 GlyctkQ8QZY2 523 aa19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 4930449I24RikQ9D5E3 319 aa19.55■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Casp8O89110 480 aa19.54■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Nol4P60954 483 aa19.54■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Tmtc2Q56A06 836 aa19.54■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Ppp2r2aQ6P1F6 447 aa19.54■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Arl6ip4Q9JM93 229 aa19.54■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Slc39a2G3X943 309 aa19.54■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Nmt2O70311 529 aa19.54■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Rgs9bpQ148R9 237 aa19.54■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Ccp110Q7TSH4 1004 aa19.54■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 IntS13Q8QZV7 732 aa19.54■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Ccdc65Q8VHI7 493 aa19.54■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Krtap5-3Q9D226 196 aa19.54■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Tex13cD3YU32 604 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Kif5cP28738 956 aaKnown RBP19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Gad1P48318 593 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Siah1aP61092 282 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Shox2P70390 331 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Tlr11Q6R5P0 926 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Ttc7aQ8BGB2 858 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Kirrel3Q8BR86 778 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Champ1Q8K327 802 aaKnown RBP19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Ifih1Q8R5F7 1025 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Pcdhb3Q91XZ7 784 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Cabp7Q91ZM8 215 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Tsnaxip1Q99P25 704 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Ccdc105Q9D4K7 499 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Becn2P0DM65 447 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 CatspereP0DP43 985 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 ProcP33587 460 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Fam207aP58468 219 aaKnown RBP19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Acot10Q32MW3 439 aa19.53■□□□□ 0.72
Sqstm1-201ENSMUST00000015981 Tspyl3Q3UYP3 334 aa19.53■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms