RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Lig1P37913 916 aa20.8■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Slc12a2P55012 1205 aa20.8■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Bend4P86174 541 aa20.8■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Krt87Q6IMF0 495 aa20.8■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Onecut3Q8K557 490 aa20.8■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Krt34Q9D646 392 aa20.8■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Mrvi1Q9WUX5 899 aaKnown RBP20.8■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Scn9aQ62205 1984 aa20.8■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Capza3P70190 299 aa20.8■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Krit1Q6S5J6 736 aa20.8■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 PodnQ7TQ62 611 aa20.8■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Lrsam1Q80ZI6 727 aa20.8■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Adcy3Q8VHH7 1145 aa20.8■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Kremen1Q99N43 473 aa20.8■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Bcl11bQ99PV8 884 aa20.8■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Gm7168A0AUV4 508 aa20.79■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Dnai2A2AC93 623 aa20.79■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 RargP18911 458 aaKnown RBP20.79■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Kifap3P70188 793 aa20.79■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Eif3j1Q3UGC7 261 aaKnown RBP20.79■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Sec31aQ3UPL0 1230 aaKnown RBP20.79■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Eif3j2Q66JS6 263 aa20.79■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Tlr13Q6R5N8 991 aa20.79■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Mmgt1Q8K273 131 aaKnown RBP20.79■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Usp15Q8R5H1 981 aa20.79■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Grem2O88273 168 aa20.79■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Pla2g4aP47713 748 aa20.79■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Shc3Q61120 474 aa20.79■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Ankrd24Q80VM7 985 aa20.79■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Haus4Q8BFT2 363 aa20.79■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Vcpip1Q8CDG3 1220 aa20.79■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Ccdc96Q9CR92 584 aa20.79■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Slc26a4Q9R155 780 aa20.79■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Map7d1A2AJI0 846 aa20.78■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Otud7bB2RUR8 840 aa20.78■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Lrrc32G3XA59 663 aa20.78■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Vmn2r68L7N2B3 851 aa20.78■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Fam178bQ24JP3 464 aa20.78■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 RragaQ80X95 313 aa20.78■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Kbtbd4Q8R179 534 aa20.78■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Smtnl1Q99LM3 459 aa20.78■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 AacsQ9D2R0 672 aa20.78■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Angptl3Q9R182 455 aa20.78■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Nlrp5Q9R1M5 1163 aa20.78■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Klrc1Q9Z202 244 aa20.78■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Apol6B7ZC55 329 aa20.78■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Folh1O35409 752 aa20.78■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Clca4aQ6Q473 924 aa20.78■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Ankrd13aQ80UP5 588 aa20.78■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Bbs9Q811G0 885 aa20.78■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Znf287Q9EQB9 759 aa20.78■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 EregQ61521 162 aa20.77■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Exoc8Q6PGF7 716 aa20.77■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Amhr2Q8K592 568 aa20.77■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Ubxn6Q99PL6 442 aa20.77■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Ribc1Q9D0B8 379 aa20.77■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Ccdc105Q9D4K7 499 aa20.77■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Galntl5Q9D4M9 431 aa20.77■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Inpp4aQ9EPW0 939 aa20.77■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Sertad1Q9JL10 236 aa20.77■□□□□ 0.92
Shkbp1-201ENSMUST00000003857 Gm4985A2ALC6 410 aa20.77■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Gm1758F6VZZ1 202 aa20.77■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Slurp2P0DP59 97 aa20.77■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Trpc6Q61143 930 aa20.77■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Ezh2Q61188 746 aaKnown RBP20.77■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Armcx3Q8BHS6 379 aa20.77■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Lrrc41Q8K1C9 807 aa20.77■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Mtmr4Q91XS1 1190 aa20.77■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Slc5a4bQ91ZP4 660 aa20.77■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Nme9A0A1L1SUL6 329 aa20.76■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 ErmardE9Q048 622 aa20.76■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Pla2g4eQ50L42 875 aa20.76■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Afg3l2Q8JZQ2 802 aaKnown RBP20.76■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Psmd2Q8VDM4 908 aa20.76■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Rwdd2aQ9D9S3 292 aa20.76■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Peg12Q9WVA7 283 aa20.76■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Tlr8P58682 1032 aa20.75■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Fhdc1Q3ULZ2 1149 aa20.75■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Ccdc157Q5SPX1 718 aa20.75■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Cc2d1bQ8BRN9 848 aa20.75■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Strip1Q8C079 837 aa20.75■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Tjap1Q9DCD5 539 aa20.75■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 MybP06876 636 aa20.75■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Kcnma1Q08460 1209 aa20.75■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Nlrx1Q3TL44 975 aa20.75■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Ccdc189Q6NZQ0 333 aa20.75■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Tmem132aQ922P8 1018 aa20.75■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Tcp1P11983 556 aaKnown RBP20.74■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Setd4P58467 439 aa20.74■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Dnajc5P60904 198 aa20.74■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Kdm7aQ3UWM4 940 aa20.74■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Znf827Q505G8 1078 aa20.74■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Tsg101Q61187 391 aa20.74■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Psd3Q2PFD7 1037 aa20.74■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Glra4Q61603 456 aa20.74■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Mettl5Q8K1A0 209 aa20.74■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Gm28919A0A087WP35 240 aa20.73■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Ppfibp2O35711 882 aa20.73■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 Men1O88559 611 aaKnown RBP20.73■□□□□ 0.91
Shkbp1-201ENSMUST00000003857 BcrQ6PAJ1 1270 aa20.73■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms