RNA–Protein interactions for RNA: tA(AGC)H

tA(AGC)H, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene tA(AGC)H, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tA(AGC)HtA(AGC)H PPH3P32345 308 aa11.77□□□□□ -0.53
tA(AGC)HtA(AGC)H PRP45P28004 379 aaPredicted RBP11.74□□□□□ -0.53
tA(AGC)HtA(AGC)H IMH1Q06704 911 aaKnown RBP11.74□□□□□ -0.53
tA(AGC)HtA(AGC)H RRP5Q05022 1729 aaKnown RBP11.74□□□□□ -0.53
tA(AGC)HtA(AGC)H YMR074CQ04773 145 aa11.73□□□□□ -0.53
tA(AGC)HtA(AGC)H SPE2P21182 396 aa11.68□□□□□ -0.54
tA(AGC)HtA(AGC)H PRP5P21372 849 aaPredicted RBP11.67□□□□□ -0.54
tA(AGC)HtA(AGC)H KIP3P53086 805 aaKnown RBP11.67□□□□□ -0.54
tA(AGC)HtA(AGC)H PSK1P31374 1356 aa11.65□□□□□ -0.55
tA(AGC)HtA(AGC)H TY4B-HP0C2J7 1802 aa11.65□□□□□ -0.55
tA(AGC)HtA(AGC)H TY4B-JP47024 1803 aa11.65□□□□□ -0.55
tA(AGC)HtA(AGC)H YRF1-2P40105 1681 aa11.64□□□□□ -0.55
tA(AGC)HtA(AGC)H ADE6P38972 1358 aaKnown RBP11.64□□□□□ -0.55
tA(AGC)HtA(AGC)H PRI1P10363 409 aa11.63□□□□□ -0.55
tA(AGC)HtA(AGC)H MSB3P48566 633 aaPredicted RBP11.61□□□□□ -0.55
tA(AGC)HtA(AGC)H ORC1P54784 914 aaPredicted RBP11.6□□□□□ -0.55
tA(AGC)HtA(AGC)H BUD31P25337 157 aaPredicted RBP11.59□□□□□ -0.55
tA(AGC)HtA(AGC)H CHZ1P40019 153 aaPredicted RBP11.58□□□□□ -0.56
tA(AGC)HtA(AGC)H LEU3P08638 886 aa11.55□□□□□ -0.56
tA(AGC)HtA(AGC)H YLR419WQ06698 1435 aaKnown RBP11.54□□□□□ -0.56
tA(AGC)HtA(AGC)H LEU2P04173 364 aaPredicted RBP11.54□□□□□ -0.56
tA(AGC)HtA(AGC)H CSE4P36012 229 aa11.54□□□□□ -0.56
tA(AGC)HtA(AGC)H IES2P40154 320 aa11.54□□□□□ -0.56
tA(AGC)HtA(AGC)H PRP43P53131 767 aaKnown RBP11.54□□□□□ -0.56
tA(AGC)HtA(AGC)H RPS24AP0CX31 135 aaKnown RBP11.53□□□□□ -0.56
tA(AGC)HtA(AGC)H RPS24BP0CX32 135 aaKnown RBP11.53□□□□□ -0.56
tA(AGC)HtA(AGC)H TCB1Q12466 1186 aa11.53□□□□□ -0.56
tA(AGC)HtA(AGC)H DOT5P40553 215 aa11.52□□□□□ -0.57
tA(AGC)HtA(AGC)H MTR4P47047 1073 aaKnown RBP11.52□□□□□ -0.57
tA(AGC)HtA(AGC)H SLM3Q12093 417 aa11.52□□□□□ -0.57
tA(AGC)HtA(AGC)H URB1P34241 1764 aaKnown RBP11.51□□□□□ -0.57
tA(AGC)HtA(AGC)H RPN11P43588 306 aaKnown RBP11.5□□□□□ -0.57
tA(AGC)HtA(AGC)H RSF2P46974 1380 aa11.48□□□□□ -0.57
tA(AGC)HtA(AGC)H YML133CQ03099 1374 aa11.47□□□□□ -0.57
tA(AGC)HtA(AGC)H YLL067CQ07888 1374 aa11.47□□□□□ -0.57
tA(AGC)HtA(AGC)H YLL066CQ99208 1374 aa11.47□□□□□ -0.57
tA(AGC)HtA(AGC)H FOX2Q02207 900 aaKnown RBP11.46□□□□□ -0.57
tA(AGC)HtA(AGC)H UBP1P25037 809 aa11.45□□□□□ -0.58
tA(AGC)HtA(AGC)H ROM2P51862 1356 aaKnown RBP11.43□□□□□ -0.58
tA(AGC)HtA(AGC)H YRF1-3P0CX14 1859 aa11.42□□□□□ -0.58
tA(AGC)HtA(AGC)H YRF1-7P0CX15 1859 aa11.42□□□□□ -0.58
tA(AGC)HtA(AGC)H YRF1-6P53819 1859 aa11.42□□□□□ -0.58
tA(AGC)HtA(AGC)H FKS3Q04952 1785 aa11.42□□□□□ -0.58
tA(AGC)HtA(AGC)H NPR2P39923 615 aa11.42□□□□□ -0.58
tA(AGC)HtA(AGC)H XKS1P42826 600 aa11.42□□□□□ -0.58
tA(AGC)HtA(AGC)H YKL133CP36066 463 aa11.4□□□□□ -0.58
tA(AGC)HtA(AGC)H YIL177CP40434 1758 aa11.4□□□□□ -0.58
tA(AGC)HtA(AGC)H YJL225CP40889 1758 aa11.4□□□□□ -0.58
tA(AGC)HtA(AGC)H YEF3P16521 1044 aaKnown RBP11.39□□□□□ -0.59
tA(AGC)HtA(AGC)H SCT1P32784 759 aa11.39□□□□□ -0.59
tA(AGC)HtA(AGC)H YBL086CP38177 466 aa11.39□□□□□ -0.59
tA(AGC)HtA(AGC)H ENP1P38333 483 aaKnown RBP11.39□□□□□ -0.59
tA(AGC)HtA(AGC)H FKH1P40466 484 aa11.39□□□□□ -0.59
tA(AGC)HtA(AGC)H LYS4P49367 693 aaPredicted RBP11.39□□□□□ -0.59
tA(AGC)HtA(AGC)H YJL181WP46987 611 aa11.37□□□□□ -0.59
tA(AGC)HtA(AGC)H COBP00163 385 aa11.36□□□□□ -0.59
tA(AGC)HtA(AGC)H GAS4Q08271 471 aa11.36□□□□□ -0.59
tA(AGC)HtA(AGC)H DPS1P04802 557 aaKnown RBP11.35□□□□□ -0.59
tA(AGC)HtA(AGC)H EDE1P34216 1381 aa11.34□□□□□ -0.59
tA(AGC)HtA(AGC)H RTG3P38165 486 aa11.34□□□□□ -0.59
tA(AGC)HtA(AGC)H LAM6Q08001 693 aa11.34□□□□□ -0.59
tA(AGC)HtA(AGC)H APC1P53886 1748 aa11.34□□□□□ -0.59
tA(AGC)HtA(AGC)H YKR075CP36155 307 aa11.33□□□□□ -0.6
tA(AGC)HtA(AGC)H PRP40P33203 583 aaKnown RBP11.32□□□□□ -0.6
tA(AGC)HtA(AGC)H UGA2P38067 497 aa11.32□□□□□ -0.6
tA(AGC)HtA(AGC)H YRF1-4O13559 1382 aa11.31□□□□□ -0.6
tA(AGC)HtA(AGC)H GTT3P39996 337 aa11.31□□□□□ -0.6
tA(AGC)HtA(AGC)H PDI1P17967 522 aaKnown RBP11.3□□□□□ -0.6
tA(AGC)HtA(AGC)H RTF1P53064 558 aa11.3□□□□□ -0.6
tA(AGC)HtA(AGC)H RCR1P38212 213 aa11.29□□□□□ -0.6
tA(AGC)HtA(AGC)H ALD2P47771 506 aa11.29□□□□□ -0.6
tA(AGC)HtA(AGC)H CTH1P47976 325 aa11.29□□□□□ -0.6
tA(AGC)HtA(AGC)H MLP1Q02455 1875 aaKnown RBP11.28□□□□□ -0.6
tA(AGC)HtA(AGC)H SSA2P10592 639 aaKnown RBP11.28□□□□□ -0.6
tA(AGC)HtA(AGC)H FRK1Q03002 865 aaPredicted RBP11.27□□□□□ -0.61
tA(AGC)HtA(AGC)H AUS1Q08409 1394 aa11.27□□□□□ -0.61
tA(AGC)HtA(AGC)H ADE16P54113 591 aaKnown RBP11.25□□□□□ -0.61
tA(AGC)HtA(AGC)H MEC3Q02574 474 aa11.25□□□□□ -0.61
tA(AGC)HtA(AGC)H TAP42Q04372 366 aa11.25□□□□□ -0.61
tA(AGC)HtA(AGC)H HIM1Q06674 414 aa11.25□□□□□ -0.61
tA(AGC)HtA(AGC)H SIR4P11978 1358 aa11.24□□□□□ -0.61
tA(AGC)HtA(AGC)H GRX4P32642 244 aa11.23□□□□□ -0.61
tA(AGC)HtA(AGC)H SNF2P22082 1703 aa11.21□□□□□ -0.61
tA(AGC)HtA(AGC)H SEC3P33332 1336 aaKnown RBP11.21□□□□□ -0.61
tA(AGC)HtA(AGC)H PDS5Q04264 1277 aa11.21□□□□□ -0.61
tA(AGC)HtA(AGC)H RPO41P13433 1351 aaKnown RBP11.19□□□□□ -0.62
tA(AGC)HtA(AGC)H POL5P39985 1022 aaKnown RBP11.19□□□□□ -0.62
tA(AGC)HtA(AGC)H MHP1P43638 1398 aa11.18□□□□□ -0.62
tA(AGC)HtA(AGC)H ATG13Q06628 738 aa11.17□□□□□ -0.62
tA(AGC)HtA(AGC)H MSB4Q12317 492 aa11.16□□□□□ -0.62
tA(AGC)HtA(AGC)H OSM1P21375 501 aaKnown RBP11.14□□□□□ -0.63
tA(AGC)HtA(AGC)H BDF1P35817 686 aa11.14□□□□□ -0.63
tA(AGC)HtA(AGC)H INP54Q08227 384 aaKnown RBP11.14□□□□□ -0.63
tA(AGC)HtA(AGC)H SPT7P35177 1332 aa11.13□□□□□ -0.63
tA(AGC)HtA(AGC)H KAR2P16474 682 aaKnown RBP11.13□□□□□ -0.63
tA(AGC)HtA(AGC)H RPG1P38249 964 aaKnown RBP11.13□□□□□ -0.63
tA(AGC)HtA(AGC)H BUB1P41695 1021 aaKnown RBP RIP-Chip data11.13□□□□□ -0.63not detected
tA(AGC)HtA(AGC)H SSA1P10591 642 aaKnown RBP11.11□□□□□ -0.63
tA(AGC)HtA(AGC)H ALD3P54114 506 aa11.11□□□□□ -0.63
tA(AGC)HtA(AGC)H GRE2Q12068 342 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms