RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B AFT1P22149 690 aa3.15□□□□□ -1.91
snR39BsnR39B RRN7P40992 514 aa3.15□□□□□ -1.91
snR39BsnR39B ASH1P34233 588 aa3.14□□□□□ -1.91
snR39BsnR39B YDR090CQ03193 310 aa3.14□□□□□ -1.91
snR39BsnR39B TY1A-DR4O74302 440 aa3.13□□□□□ -1.91
snR39BsnR39B TY1A-HP0C2I4 478 aaKnown RBP3.13□□□□□ -1.91
snR39BsnR39B TY1A-AP0CX57 440 aa3.13□□□□□ -1.91
snR39BsnR39B TY1A-PR1P0CX58 440 aa3.13□□□□□ -1.91
snR39BsnR39B TY1A-ORP0CX59 440 aa3.13□□□□□ -1.91
snR39BsnR39B TY1A-PR2P0CX60 440 aa3.13□□□□□ -1.91
snR39BsnR39B TY1A-DR5P0CX65 440 aa3.13□□□□□ -1.91
snR39BsnR39B TY1A-ER2P0CX66 440 aa3.13□□□□□ -1.91
snR39BsnR39B TY1A-GR3P0CX67 440 aa3.13□□□□□ -1.91
snR39BsnR39B TY1A-LR1P0CX68 440 aa3.13□□□□□ -1.91
snR39BsnR39B TY1A-MR2P0CX69 440 aa3.13□□□□□ -1.91
snR39BsnR39B SEC2P17065 759 aa3.13□□□□□ -1.91
snR39BsnR39B TY1A-JR2P47099 440 aa3.13□□□□□ -1.91
snR39BsnR39B TY1A-DR1Q03856 440 aa3.13□□□□□ -1.91
snR39BsnR39B TY1A-ML1Q04706 440 aaKnown RBP3.13□□□□□ -1.91
snR39BsnR39B YDL176WQ12027 708 aa3.13□□□□□ -1.91
snR39BsnR39B TY1A-BRQ12217 440 aa3.13□□□□□ -1.91
snR39BsnR39B TY1A-NL2Q12470 440 aa3.13□□□□□ -1.91
snR39BsnR39B TY1A-GR2Q12485 440 aa3.13□□□□□ -1.91
snR39BsnR39B MAK21Q12176 1025 aaKnown RBP3.12□□□□□ -1.91
snR39BsnR39B ORC6P38826 435 aa3.11□□□□□ -1.91
snR39BsnR39B RRD1P40454 393 aaKnown RBP3.11□□□□□ -1.91
snR39BsnR39B REF2P42073 533 aaPredicted RBP3.11□□□□□ -1.91
snR39BsnR39B MVP1P40959 511 aaKnown RBP3.1□□□□□ -1.91
snR39BsnR39B YLR346CQ06139 101 aa3.1□□□□□ -1.91
snR39BsnR39B MET32Q12041 191 aa3.09□□□□□ -1.91
snR39BsnR39B TRK2P28584 889 aa3.08□□□□□ -1.92
snR39BsnR39B MSB3P48566 633 aaPredicted RBP3.08□□□□□ -1.92
snR39BsnR39B ACO2P39533 789 aa3.07□□□□□ -1.92
snR39BsnR39B YJR115WP47152 169 aa3.07□□□□□ -1.92
snR39BsnR39B YPR109WQ06104 294 aa3.07□□□□□ -1.92
snR39BsnR39B COX6P00427 148 aa3.06□□□□□ -1.92
snR39BsnR39B MOD5P07884 428 aa3.06□□□□□ -1.92
snR39BsnR39B RTT106P40161 455 aa3.06□□□□□ -1.92
snR39BsnR39B YGR035CP53222 116 aa3.06□□□□□ -1.92
snR39BsnR39B RGR1P19263 1082 aa3.05□□□□□ -1.92
snR39BsnR39B CAF120P53836 1060 aa3.05□□□□□ -1.92
snR39BsnR39B SRF1Q12516 437 aa3.05□□□□□ -1.92
snR39BsnR39B KEX2P13134 814 aa3.04□□□□□ -1.92
snR39BsnR39B CLB5P30283 435 aa3.04□□□□□ -1.92
snR39BsnR39B YPR148CQ06523 435 aa3.04□□□□□ -1.92
snR39BsnR39B YPR204WQ08995 1032 aa3.04□□□□□ -1.92
snR39BsnR39B UGA3P26370 528 aa3.03□□□□□ -1.92
snR39BsnR39B RTF1P53064 558 aa3.03□□□□□ -1.92
snR39BsnR39B KXD1P53158 218 aa3.03□□□□□ -1.92
snR39BsnR39B SYH1Q02875 849 aaKnown RBP3.03□□□□□ -1.92
snR39BsnR39B GLY1P37303 387 aaKnown RBP3.02□□□□□ -1.93
snR39BsnR39B PAC1P39946 494 aaKnown RBP3.02□□□□□ -1.93
snR39BsnR39B PUS5Q06244 254 aa3.02□□□□□ -1.93
snR39BsnR39B TPD3P31383 635 aa3.01□□□□□ -1.93
snR39BsnR39B ICP55P40051 511 aa3.01□□□□□ -1.93
snR39BsnR39B SCW11P53189 542 aa3.01□□□□□ -1.93
snR39BsnR39B TUB4P53378 473 aa3.01□□□□□ -1.93
snR39BsnR39B OPT2Q06593 877 aa3.01□□□□□ -1.93
snR39BsnR39B PUS1Q12211 544 aaKnown RBP3.01□□□□□ -1.93
snR39BsnR39B NUP85P46673 744 aa3□□□□□ -1.93
snR39BsnR39B PTK2P47116 818 aaKnown RBP3□□□□□ -1.93
snR39BsnR39B TYW1Q08960 810 aaKnown RBP3□□□□□ -1.93
snR39BsnR39B MIP1P15801 1254 aa2.99□□□□□ -1.93
snR39BsnR39B PSE1P32337 1089 aaKnown RBP2.99□□□□□ -1.93
snR39BsnR39B YNL115CP53925 644 aa2.99□□□□□ -1.93
snR39BsnR39B AGE1Q04412 482 aa2.99□□□□□ -1.93
snR39BsnR39B ERF2Q06551 359 aa2.99□□□□□ -1.93
snR39BsnR39B HXT10P43581 546 aa2.98□□□□□ -1.93
snR39BsnR39B HPF1Q05164 967 aa2.98□□□□□ -1.93
snR39BsnR39B DPH6Q12429 685 aa2.98□□□□□ -1.93
snR39BsnR39B YIR007WP40566 764 aa2.97□□□□□ -1.93
snR39BsnR39B UBP2Q01476 1272 aa2.97□□□□□ -1.93
snR39BsnR39B PHM7Q12252 991 aa2.97□□□□□ -1.93
snR39BsnR39B KIP2P28743 706 aa2.96□□□□□ -1.94
snR39BsnR39B LSB3P43603 459 aaKnown RBP2.96□□□□□ -1.94
snR39BsnR39B VPS70P47161 811 aa2.96□□□□□ -1.94
snR39BsnR39B TY1A-BLQ12266 440 aa2.96□□□□□ -1.94
snR39BsnR39B LSC2P53312 427 aa2.95□□□□□ -1.94
snR39BsnR39B ARG82P07250 355 aa2.94□□□□□ -1.94
snR39BsnR39B MRT4P33201 236 aaKnown RBP2.94□□□□□ -1.94
snR39BsnR39B ALR1Q08269 859 aa2.94□□□□□ -1.94
snR39BsnR39B SIT4P20604 311 aa2.93□□□□□ -1.94
snR39BsnR39B IXR1P33417 597 aa2.93□□□□□ -1.94
snR39BsnR39B LYS5P50113 272 aa2.93□□□□□ -1.94
snR39BsnR39B PDC1P06169 563 aaKnown RBP2.92□□□□□ -1.94
snR39BsnR39B CKB1P43639 278 aa2.92□□□□□ -1.94
snR39BsnR39B TBF1Q02457 562 aa2.92□□□□□ -1.94
snR39BsnR39B TEA1P47988 759 aa2.91□□□□□ -1.94
snR39BsnR39B RPA14P50106 137 aa2.91□□□□□ -1.94
snR39BsnR39B NRD1P53617 575 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
snR39BsnR39B YPR097WQ06839 1073 aa2.9□□□□□ -1.95
snR39BsnR39B PBS2P08018 668 aa2.89□□□□□ -1.95
snR39BsnR39B AAD14P42884 376 aa2.89□□□□□ -1.95
snR39BsnR39B ROG3P43602 733 aa2.89□□□□□ -1.95
snR39BsnR39B PUS6P53294 404 aa2.89□□□□□ -1.95
snR39BsnR39B SLY41P22215 453 aa2.88□□□□□ -1.95
snR39BsnR39B OSH7P38755 437 aa2.88□□□□□ -1.95
snR39BsnR39B TY1A-MR1Q04215 440 aa2.88□□□□□ -1.95
snR39BsnR39B MAM3Q12296 706 aa2.88□□□□□ -1.95
snR39BsnR39B BUB1P41695 1021 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms