RNA–Protein interactions for RNA: YPL181W

CTI6, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene CTI6, Length 1,521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTI6YPL181W YLR419WQ06698 1435 aaKnown RBP12.01□□□□□ -0.49
CTI6YPL181W PSK1P31374 1356 aa11.98□□□□□ -0.49
CTI6YPL181W CHZ1P40019 153 aaPredicted RBP11.97□□□□□ -0.49
CTI6YPL181W REB1P21538 810 aa11.96□□□□□ -0.49
CTI6YPL181W ENT1Q12518 454 aa11.94□□□□□ -0.5
CTI6YPL181W ADE6P38972 1358 aaKnown RBP11.92□□□□□ -0.5
CTI6YPL181W AVT3P36062 692 aa11.92□□□□□ -0.5
CTI6YPL181W RRP5Q05022 1729 aaKnown RBP11.91□□□□□ -0.5
CTI6YPL181W PRP45P28004 379 aaPredicted RBP11.91□□□□□ -0.5
CTI6YPL181W TY4B-HP0C2J7 1802 aa11.91□□□□□ -0.5
CTI6YPL181W TY4B-JP47024 1803 aa11.91□□□□□ -0.5
CTI6YPL181W SCT1P32784 759 aa11.9□□□□□ -0.5
CTI6YPL181W ENV9Q08651 330 aa11.89□□□□□ -0.51
CTI6YPL181W LEU2P04173 364 aaPredicted RBP11.88□□□□□ -0.51
CTI6YPL181W YIL055CP40523 627 aaKnown RBP11.88□□□□□ -0.51
CTI6YPL181W PRP5P21372 849 aaPredicted RBP11.86□□□□□ -0.51
CTI6YPL181W POL5P39985 1022 aaKnown RBP11.86□□□□□ -0.51
CTI6YPL181W MTR4P47047 1073 aaKnown RBP11.86□□□□□ -0.51
CTI6YPL181W YML133CQ03099 1374 aa11.85□□□□□ -0.51
CTI6YPL181W YLL067CQ07888 1374 aa11.85□□□□□ -0.51
CTI6YPL181W YLL066CQ99208 1374 aa11.85□□□□□ -0.51
CTI6YPL181W PRP43P53131 767 aaKnown RBP11.83□□□□□ -0.52
CTI6YPL181W RPS24AP0CX31 135 aaKnown RBP11.81□□□□□ -0.52
CTI6YPL181W RPS24BP0CX32 135 aaKnown RBP11.81□□□□□ -0.52
CTI6YPL181W GLN1P32288 370 aaKnown RBP11.81□□□□□ -0.52
CTI6YPL181W CSE4P36012 229 aa11.81□□□□□ -0.52
CTI6YPL181W FKH1P40466 484 aa11.81□□□□□ -0.52
CTI6YPL181W MSB3P48566 633 aaPredicted RBP11.81□□□□□ -0.52
CTI6YPL181W IMH1Q06704 911 aaKnown RBP11.81□□□□□ -0.52
CTI6YPL181W YRF1-2P40105 1681 aa11.8□□□□□ -0.52
CTI6YPL181W DIP2Q12220 943 aaPredicted RBP11.79□□□□□ -0.52
CTI6YPL181W MHP1P43638 1398 aa11.78□□□□□ -0.52
CTI6YPL181W RTG3P38165 486 aa11.77□□□□□ -0.52
CTI6YPL181W MLP1Q02455 1875 aaKnown RBP11.77□□□□□ -0.53
CTI6YPL181W SLM3Q12093 417 aa11.75□□□□□ -0.53
CTI6YPL181W PDS5Q04264 1277 aa11.74□□□□□ -0.53
CTI6YPL181W TCB1Q12466 1186 aa11.73□□□□□ -0.53
CTI6YPL181W YMR074CQ04773 145 aa11.71□□□□□ -0.53
CTI6YPL181W YIL177CP40434 1758 aa11.7□□□□□ -0.54
CTI6YPL181W YJL225CP40889 1758 aa11.7□□□□□ -0.54
CTI6YPL181W PDI1P17967 522 aaKnown RBP11.7□□□□□ -0.54
CTI6YPL181W IES2P40154 320 aa11.69□□□□□ -0.54
CTI6YPL181W RSF2P46974 1380 aa11.68□□□□□ -0.54
CTI6YPL181W GAS4Q08271 471 aa11.68□□□□□ -0.54
CTI6YPL181W RTF1P53064 558 aa11.67□□□□□ -0.54
CTI6YPL181W DPS1P04802 557 aaKnown RBP11.66□□□□□ -0.54
CTI6YPL181W URB1P34241 1764 aaKnown RBP11.66□□□□□ -0.54
CTI6YPL181W LEU3P08638 886 aa11.65□□□□□ -0.54
CTI6YPL181W TAP42Q04372 366 aa11.65□□□□□ -0.54
CTI6YPL181W AUS1Q08409 1394 aa11.64□□□□□ -0.55
CTI6YPL181W XKS1P42826 600 aa11.64□□□□□ -0.55
CTI6YPL181W DOT5P40553 215 aa11.63□□□□□ -0.55
CTI6YPL181W HIM1Q06674 414 aa11.62□□□□□ -0.55
CTI6YPL181W YRF1-3P0CX14 1859 aa11.62□□□□□ -0.55
CTI6YPL181W YRF1-7P0CX15 1859 aa11.62□□□□□ -0.55
CTI6YPL181W YRF1-6P53819 1859 aa11.62□□□□□ -0.55
CTI6YPL181W GRX4P32642 244 aa11.61□□□□□ -0.55
CTI6YPL181W FKS3Q04952 1785 aa11.61□□□□□ -0.55
CTI6YPL181W ROM2P51862 1356 aaKnown RBP11.61□□□□□ -0.55
CTI6YPL181W APC1P53886 1748 aa11.61□□□□□ -0.55
CTI6YPL181W ENP1P38333 483 aaKnown RBP11.6□□□□□ -0.55
CTI6YPL181W NST1P53935 1240 aa11.6□□□□□ -0.55
CTI6YPL181W YEF3P16521 1044 aaKnown RBP11.59□□□□□ -0.55
CTI6YPL181W BUD31P25337 157 aaPredicted RBP11.58□□□□□ -0.56
CTI6YPL181W YKL133CP36066 463 aa11.58□□□□□ -0.56
CTI6YPL181W FOX2Q02207 900 aaKnown RBP11.58□□□□□ -0.56
CTI6YPL181W SEC3P33332 1336 aaKnown RBP11.58□□□□□ -0.56
CTI6YPL181W RPN11P43588 306 aaKnown RBP11.56□□□□□ -0.56
CTI6YPL181W KAR2P16474 682 aaKnown RBP11.55□□□□□ -0.56
CTI6YPL181W RCR1P38212 213 aa11.55□□□□□ -0.56
CTI6YPL181W PSD2P53037 1138 aaKnown RBP11.55□□□□□ -0.56
CTI6YPL181W PRI1P10363 409 aa11.54□□□□□ -0.56
CTI6YPL181W TRK1P12685 1235 aa11.53□□□□□ -0.56
CTI6YPL181W COBP00163 385 aa11.51□□□□□ -0.57
CTI6YPL181W SIR4P11978 1358 aa11.51□□□□□ -0.57
CTI6YPL181W RPO41P13433 1351 aaKnown RBP11.5□□□□□ -0.57
CTI6YPL181W UBP1P25037 809 aa11.5□□□□□ -0.57
CTI6YPL181W YRF1-4O13559 1382 aa11.49□□□□□ -0.57
CTI6YPL181W BUB1P41695 1021 aaKnown RBP RIP-Chip data11.49□□□□□ -0.57not detected
CTI6YPL181W ADE16P54113 591 aaKnown RBP11.49□□□□□ -0.57
CTI6YPL181W MEC3Q02574 474 aa11.49□□□□□ -0.57
CTI6YPL181W YKR075CP36155 307 aa11.48□□□□□ -0.57
CTI6YPL181W NPR2P39923 615 aa11.48□□□□□ -0.57
CTI6YPL181W FRK1Q03002 865 aaPredicted RBP11.48□□□□□ -0.57
CTI6YPL181W LAM6Q08001 693 aa11.48□□□□□ -0.57
CTI6YPL181W YJL181WP46987 611 aa11.47□□□□□ -0.57
CTI6YPL181W PAP2P53632 584 aaKnown RBP11.47□□□□□ -0.57
CTI6YPL181W SNF2P22082 1703 aa11.47□□□□□ -0.57
CTI6YPL181W EDE1P34216 1381 aa11.47□□□□□ -0.57
CTI6YPL181W SPT7P35177 1332 aa11.45□□□□□ -0.58
CTI6YPL181W PRP40P33203 583 aaKnown RBP11.45□□□□□ -0.58
CTI6YPL181W DSD1P53095 428 aa11.44□□□□□ -0.58
CTI6YPL181W LYS4P49367 693 aaPredicted RBP11.43□□□□□ -0.58
CTI6YPL181W INP54Q08227 384 aaKnown RBP11.43□□□□□ -0.58
CTI6YPL181W HSP104P31539 908 aaKnown RBP11.41□□□□□ -0.58
CTI6YPL181W AKL1P38080 1108 aaKnown RBP11.41□□□□□ -0.58
CTI6YPL181W RRP46P53256 223 aaPredicted RBP11.41□□□□□ -0.58
CTI6YPL181W ATG13Q06628 738 aa11.4□□□□□ -0.58
CTI6YPL181W OSM1P21375 501 aaKnown RBP11.39□□□□□ -0.59
CTI6YPL181W YBL086CP38177 466 aa11.39□□□□□ -0.59
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms