RNA–Protein interactions for RNA: YPL176C

TRE1, Transcript of Transferrin receptor-like protein, yeastyeast

Gene TRE1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRE1YPL176C PML39Q03760 334 aa6.07□□□□□ -1.44
TRE1YPL176C SSF1P38789 453 aaPredicted RBP6.06□□□□□ -1.44
TRE1YPL176C CSC1Q06538 782 aa6.06□□□□□ -1.44
TRE1YPL176C NIS1P53939 407 aa6.05□□□□□ -1.44
TRE1YPL176C TFB3Q03290 321 aa6.05□□□□□ -1.44
TRE1YPL176C MPC54Q08550 464 aa6.05□□□□□ -1.44
TRE1YPL176C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
TRE1YPL176C RTG1P32607 177 aa6.04□□□□□ -1.44
TRE1YPL176C SIS2P36024 562 aa6.04□□□□□ -1.44
TRE1YPL176C CSN12P47130 423 aa6.04□□□□□ -1.44
TRE1YPL176C SEN54Q02825 467 aaPredicted RBP6.04□□□□□ -1.44
TRE1YPL176C OSW7P43611 510 aa6.03□□□□□ -1.44
TRE1YPL176C SEC61P32915 480 aa6.03□□□□□ -1.44
TRE1YPL176C YPR109WQ06104 294 aa6.03□□□□□ -1.44
TRE1YPL176C DPL1Q05567 589 aa6.02□□□□□ -1.45
TRE1YPL176C PKC1P24583 1151 aa6.02□□□□□ -1.45
TRE1YPL176C CLB5P30283 435 aa6.02□□□□□ -1.45
TRE1YPL176C TYW1Q08960 810 aaKnown RBP6.02□□□□□ -1.45
TRE1YPL176C TFB4Q12004 338 aa6.02□□□□□ -1.45
TRE1YPL176C BUD31P25337 157 aaPredicted RBP6.01□□□□□ -1.45
TRE1YPL176C HEM3P28789 327 aa6.01□□□□□ -1.45
TRE1YPL176C BUD21Q08492 214 aaPredicted RBP6.01□□□□□ -1.45
TRE1YPL176C FPK1P53739 893 aa6.01□□□□□ -1.45
TRE1YPL176C TUM1Q08686 304 aaKnown RBP6□□□□□ -1.45
TRE1YPL176C PEX29Q03370 554 aa6□□□□□ -1.45
TRE1YPL176C SSA2P10592 639 aaKnown RBP5.99□□□□□ -1.45
TRE1YPL176C RPP1BP10622 106 aaKnown RBP5.99□□□□□ -1.45
TRE1YPL176C SSA4P22202 642 aaKnown RBP5.99□□□□□ -1.45
TRE1YPL176C ALD4P46367 519 aaKnown RBP5.99□□□□□ -1.45
TRE1YPL176C YDR344CQ05510 147 aa5.99□□□□□ -1.45
TRE1YPL176C GLN1P32288 370 aaKnown RBP5.99□□□□□ -1.45
TRE1YPL176C YAF9P53930 226 aa5.99□□□□□ -1.45
TRE1YPL176C KOG1P38873 1557 aa5.98□□□□□ -1.45
TRE1YPL176C SIT4P20604 311 aa5.98□□□□□ -1.45
TRE1YPL176C SCJ1P25303 377 aa5.98□□□□□ -1.45
TRE1YPL176C MNN4P36044 1178 aa5.98□□□□□ -1.45
TRE1YPL176C HST2P53686 357 aa5.98□□□□□ -1.45
TRE1YPL176C PDR1P12383 1068 aa5.97□□□□□ -1.45
TRE1YPL176C BIM1P40013 344 aa5.97□□□□□ -1.45
TRE1YPL176C NMA111P53920 997 aa5.97□□□□□ -1.45
TRE1YPL176C FKH1P40466 484 aa5.96□□□□□ -1.45
TRE1YPL176C NCR1Q12200 1170 aa5.96□□□□□ -1.45
TRE1YPL176C PEX21P50091 288 aa5.96□□□□□ -1.46
TRE1YPL176C YDL129WQ07555 291 aa5.96□□□□□ -1.46
TRE1YPL176C YRR1Q12172 810 aa5.96□□□□□ -1.46
TRE1YPL176C FPR4Q06205 392 aaPredicted RBP5.95□□□□□ -1.46
TRE1YPL176C UBX5Q06682 500 aa5.95□□□□□ -1.46
TRE1YPL176C ISU2Q12056 156 aa5.95□□□□□ -1.46
TRE1YPL176C CDC3P32457 520 aaKnown RBP5.95□□□□□ -1.46
TRE1YPL176C ATG32P40458 529 aa5.95□□□□□ -1.46
TRE1YPL176C ESS1P22696 170 aa5.94□□□□□ -1.46
TRE1YPL176C NMD2P38798 1089 aaKnown RBP5.94□□□□□ -1.46
TRE1YPL176C YMR196WQ04336 1088 aa5.94□□□□□ -1.46
TRE1YPL176C CST6P40535 587 aa5.93□□□□□ -1.46
TRE1YPL176C RPL34AP87262 121 aaPredicted RBP5.93□□□□□ -1.46
TRE1YPL176C YJU3P28321 313 aa5.93□□□□□ -1.46
TRE1YPL176C RPS0BP46654 252 aaKnown RBP5.93□□□□□ -1.46
TRE1YPL176C NOB1Q08444 459 aaKnown RBP5.93□□□□□ -1.46
TRE1YPL176C MMP1Q12372 583 aa5.93□□□□□ -1.46
TRE1YPL176C YJL007CP47080 104 aa5.92□□□□□ -1.46
TRE1YPL176C AIR2Q12476 344 aaKnown RBP5.92□□□□□ -1.46
TRE1YPL176C CPS1P27614 576 aa5.92□□□□□ -1.46
TRE1YPL176C ZDS1P50111 915 aaKnown RBP5.92□□□□□ -1.46
TRE1YPL176C ITT1Q04638 464 aa5.92□□□□□ -1.46
TRE1YPL176C SPA2P23201 1466 aaKnown RBP5.91□□□□□ -1.46
TRE1YPL176C TOM20P35180 183 aa5.91□□□□□ -1.46
TRE1YPL176C SAP30P38429 201 aa5.91□□□□□ -1.46
TRE1YPL176C NAB3P38996 802 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
TRE1YPL176C TFG1P41895 735 aaPredicted RBP5.9□□□□□ -1.46
TRE1YPL176C ALD2P47771 506 aa5.9□□□□□ -1.46
TRE1YPL176C ARH1P48360 493 aa5.9□□□□□ -1.46
TRE1YPL176C PKH3Q03306 898 aaPredicted RBP5.9□□□□□ -1.46
TRE1YPL176C ERF2Q06551 359 aa5.9□□□□□ -1.46
TRE1YPL176C RAD59Q12223 238 aa5.9□□□□□ -1.46
TRE1YPL176C ERG12P07277 443 aa5.89□□□□□ -1.47
TRE1YPL176C NUD1P32336 851 aa5.89□□□□□ -1.47
TRE1YPL176C RSC30P38781 883 aa5.89□□□□□ -1.47
TRE1YPL176C HAP5Q02516 242 aa5.89□□□□□ -1.47
TRE1YPL176C STR2P47164 639 aa5.89□□□□□ -1.47
TRE1YPL176C HAT1Q12341 374 aa5.89□□□□□ -1.47
TRE1YPL176C RAM1P22007 431 aa5.88□□□□□ -1.47
TRE1YPL176C KEX2P13134 814 aa5.88□□□□□ -1.47
TRE1YPL176C BIO2P32451 375 aa5.88□□□□□ -1.47
TRE1YPL176C NNF1P47149 201 aa5.88□□□□□ -1.47
TRE1YPL176C RNH70P53331 553 aa5.88□□□□□ -1.47
TRE1YPL176C TIF1P10081 395 aaKnown RBP5.87□□□□□ -1.47
TRE1YPL176C IPL1P38991 367 aa5.87□□□□□ -1.47
TRE1YPL176C RTF1P53064 558 aa5.87□□□□□ -1.47
TRE1YPL176C CWC22P53333 577 aaKnown RBP5.87□□□□□ -1.47
TRE1YPL176C YNL115CP53925 644 aa5.87□□□□□ -1.47
TRE1YPL176C SLY41P22215 453 aa5.87□□□□□ -1.47
TRE1YPL176C TTI1P36097 1038 aa5.86□□□□□ -1.47
TRE1YPL176C ISM1P48526 1002 aa5.86□□□□□ -1.47
TRE1YPL176C TOA1P32773 286 aa5.86□□□□□ -1.47
TRE1YPL176C PMC1P38929 1173 aaPredicted RBP5.86□□□□□ -1.47
TRE1YPL176C TY1A-DR4O74302 440 aa5.85□□□□□ -1.47
TRE1YPL176C TY1A-HP0C2I4 478 aaKnown RBP5.85□□□□□ -1.47
TRE1YPL176C TY1A-AP0CX57 440 aa5.85□□□□□ -1.47
TRE1YPL176C TY1A-PR1P0CX58 440 aa5.85□□□□□ -1.47
TRE1YPL176C TY1A-ORP0CX59 440 aa5.85□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms