RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C TY1A-GR3P0CX67 440 aa9.17□□□□□ -0.94
RPN8YOR261C TY1A-LR1P0CX68 440 aa9.17□□□□□ -0.94
RPN8YOR261C TY1A-MR2P0CX69 440 aa9.17□□□□□ -0.94
RPN8YOR261C TY1A-JR2P47099 440 aa9.17□□□□□ -0.94
RPN8YOR261C TY1A-DR1Q03856 440 aa9.17□□□□□ -0.94
RPN8YOR261C TY1A-ML1Q04706 440 aaKnown RBP9.17□□□□□ -0.94
RPN8YOR261C TY1A-BRQ12217 440 aa9.17□□□□□ -0.94
RPN8YOR261C TY1A-NL2Q12470 440 aa9.17□□□□□ -0.94
RPN8YOR261C TY1A-GR2Q12485 440 aa9.17□□□□□ -0.94
RPN8YOR261C GAR1P28007 205 aaKnown RBP9.16□□□□□ -0.94
RPN8YOR261C LAM6Q08001 693 aa9.16□□□□□ -0.94
RPN8YOR261C TFB4Q12004 338 aa9.16□□□□□ -0.94
RPN8YOR261C LEU3P08638 886 aa9.15□□□□□ -0.94
RPN8YOR261C SEC2P17065 759 aa9.15□□□□□ -0.94
RPN8YOR261C CSC1Q06538 782 aa9.15□□□□□ -0.94
RPN8YOR261C KIC1P38692 1080 aa9.14□□□□□ -0.95
RPN8YOR261C MAM3Q12296 706 aa9.13□□□□□ -0.95
RPN8YOR261C GCR2Q01722 534 aa9.1□□□□□ -0.95
RPN8YOR261C GCD11P32481 527 aaKnown RBP9.09□□□□□ -0.95
RPN8YOR261C ORC6P38826 435 aa9.09□□□□□ -0.95
RPN8YOR261C NPL4P33755 580 aa9.07□□□□□ -0.96
RPN8YOR261C IES2P40154 320 aa9.07□□□□□ -0.96
RPN8YOR261C NUP42P49686 430 aaKnown RBP9.07□□□□□ -0.96
RPN8YOR261C FRK1Q03002 865 aaPredicted RBP9.07□□□□□ -0.96
RPN8YOR261C SPT16P32558 1035 aaKnown RBP9.05□□□□□ -0.96
RPN8YOR261C CDC4P07834 779 aa9.04□□□□□ -0.96
RPN8YOR261C GBP2P25555 427 aaKnown RBP RIP-Chip data9.04□□□□□ -0.96not detected
RPN8YOR261C BDP1P46678 594 aa9.04□□□□□ -0.96
RPN8YOR261C DIT2P21595 489 aa9.03□□□□□ -0.96
RPN8YOR261C MET22P32179 357 aa9.02□□□□□ -0.97
RPN8YOR261C RRN7P40992 514 aa9□□□□□ -0.97
RPN8YOR261C MVP1P40959 511 aaKnown RBP8.99□□□□□ -0.97
RPN8YOR261C YNR021WP53723 404 aaKnown RBP8.97□□□□□ -0.97
RPN8YOR261C PSE1P32337 1089 aaKnown RBP8.95□□□□□ -0.98
RPN8YOR261C RPN1P38764 993 aaKnown RBP8.94□□□□□ -0.98
RPN8YOR261C ENV9Q08651 330 aa8.94□□□□□ -0.98
RPN8YOR261C RGR1P19263 1082 aa8.93□□□□□ -0.98
RPN8YOR261C LEO1P38439 464 aa8.93□□□□□ -0.98
RPN8YOR261C HED1Q03937 162 aa8.93□□□□□ -0.98
RPN8YOR261C YPR109WQ06104 294 aa8.93□□□□□ -0.98
RPN8YOR261C ERF2Q06551 359 aa8.92□□□□□ -0.98
RPN8YOR261C KEX2P13134 814 aa8.88□□□□□ -0.99
RPN8YOR261C GLC3P32775 704 aa8.88□□□□□ -0.99
RPN8YOR261C YDR444WQ04093 687 aa8.87□□□□□ -0.99
RPN8YOR261C MET32Q12041 191 aa8.87□□□□□ -0.99
RPN8YOR261C PAT1P25644 796 aaKnown RBP8.85□□□□□ -0.99
RPN8YOR261C YDL176WQ12027 708 aa8.85□□□□□ -0.99
RPN8YOR261C AIM7Q12156 149 aa8.85□□□□□ -0.99
RPN8YOR261C ATF2P53296 535 aa8.84□□□□□ -0.99
RPN8YOR261C ASH1P34233 588 aa8.83□□□□□ -1
RPN8YOR261C PAC1P39946 494 aaKnown RBP8.83□□□□□ -1
RPN8YOR261C MOD5P07884 428 aa8.82□□□□□ -1
RPN8YOR261C LCB5Q06147 687 aaKnown RBP8.8□□□□□ -1
RPN8YOR261C TEA1P47988 759 aa8.79□□□□□ -1
RPN8YOR261C KIN1P13185 1064 aa8.78□□□□□ -1
RPN8YOR261C CLB5P30283 435 aa8.78□□□□□ -1
RPN8YOR261C PUS5Q06244 254 aa8.78□□□□□ -1
RPN8YOR261C AGE1Q04412 482 aa8.77□□□□□ -1.01
RPN8YOR261C AFT1P22149 690 aa8.76□□□□□ -1.01
RPN8YOR261C TUB4P53378 473 aa8.72□□□□□ -1.01
RPN8YOR261C RRD1P40454 393 aaKnown RBP8.71□□□□□ -1.02
RPN8YOR261C HST3P53687 447 aa8.71□□□□□ -1.02
RPN8YOR261C NIS1P53939 407 aa8.7□□□□□ -1.02
RPN8YOR261C SIT4P20604 311 aa8.69□□□□□ -1.02
RPN8YOR261C YJR115WP47152 169 aa8.69□□□□□ -1.02
RPN8YOR261C FPK1P53739 893 aa8.66□□□□□ -1.02
RPN8YOR261C GUA1P38625 525 aaKnown RBP8.63□□□□□ -1.03
RPN8YOR261C HST2P53686 357 aa8.62□□□□□ -1.03
RPN8YOR261C CSN12P47130 423 aa8.61□□□□□ -1.03
RPN8YOR261C KTR1P27810 393 aaKnown RBP8.6□□□□□ -1.03
RPN8YOR261C RTF1P53064 558 aa8.6□□□□□ -1.03
RPN8YOR261C YNL115CP53925 644 aa8.6□□□□□ -1.03
RPN8YOR261C YMR196WQ04336 1088 aa8.6□□□□□ -1.03
RPN8YOR261C SCJ1P25303 377 aa8.59□□□□□ -1.03
RPN8YOR261C TYW1Q08960 810 aaKnown RBP8.59□□□□□ -1.03
RPN8YOR261C GLN1P32288 370 aaKnown RBP8.57□□□□□ -1.04
RPN8YOR261C MMP1Q12372 583 aa8.57□□□□□ -1.04
RPN8YOR261C CAF120P53836 1060 aa8.56□□□□□ -1.04
RPN8YOR261C ACO2P39533 789 aa8.54□□□□□ -1.04
RPN8YOR261C SLY41P22215 453 aa8.53□□□□□ -1.04
RPN8YOR261C MSB3P48566 633 aaPredicted RBP8.53□□□□□ -1.04
RPN8YOR261C HPC2Q01448 625 aa8.53□□□□□ -1.04
RPN8YOR261C SSA2P10592 639 aaKnown RBP8.52□□□□□ -1.05
RPN8YOR261C ESS1P22696 170 aa8.52□□□□□ -1.05
RPN8YOR261C TPD3P31383 635 aa8.52□□□□□ -1.05
RPN8YOR261C HXT10P43581 546 aa8.5□□□□□ -1.05
RPN8YOR261C KXD1P53158 218 aa8.5□□□□□ -1.05
RPN8YOR261C YJU3P28321 313 aa8.49□□□□□ -1.05
RPN8YOR261C DMA2P53924 522 aa8.49□□□□□ -1.05
RPN8YOR261C OPT2Q06593 877 aa8.49□□□□□ -1.05
RPN8YOR261C PDC1P06169 563 aaKnown RBP8.48□□□□□ -1.05
RPN8YOR261C SYH1Q02875 849 aaKnown RBP8.48□□□□□ -1.05
RPN8YOR261C RSC30P38781 883 aa8.46□□□□□ -1.06
RPN8YOR261C PTK2P47116 818 aaKnown RBP8.46□□□□□ -1.06
RPN8YOR261C PUS6P53294 404 aa8.46□□□□□ -1.06
RPN8YOR261C PKH3Q03306 898 aaPredicted RBP8.46□□□□□ -1.06
RPN8YOR261C BUB1P41695 1021 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06not detected
RPN8YOR261C TFB3Q03290 321 aa8.45□□□□□ -1.06
RPN8YOR261C MTC5Q03897 1148 aa8.45□□□□□ -1.06
RPN8YOR261C UGA3P26370 528 aa8.44□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms