RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W MAC1P35192 417 aa3.98□□□□□ -1.77
CAF120YNL278W PTP3P40048 928 aa3.97□□□□□ -1.77
CAF120YNL278W FKS3Q04952 1785 aa3.97□□□□□ -1.77
CAF120YNL278W MRPL32P25348 183 aa3.97□□□□□ -1.77
CAF120YNL278W SEC3P33332 1336 aaKnown RBP3.96□□□□□ -1.77
CAF120YNL278W BUD31P25337 157 aaPredicted RBP3.96□□□□□ -1.77
CAF120YNL278W UTP10P42945 1769 aaKnown RBP3.96□□□□□ -1.78
CAF120YNL278W SCT1P32784 759 aa3.96□□□□□ -1.78
CAF120YNL278W PUS5Q06244 254 aa3.96□□□□□ -1.78
CAF120YNL278W TY4B-HP0C2J7 1802 aa3.95□□□□□ -1.78
CAF120YNL278W TY4B-JP47024 1803 aa3.95□□□□□ -1.78
CAF120YNL278W DUS1P53759 423 aaKnown RBP3.95□□□□□ -1.78
CAF120YNL278W RSF2P46974 1380 aa3.95□□□□□ -1.78
CAF120YNL278W PDR11P40550 1411 aa3.94□□□□□ -1.78
CAF120YNL278W RTC1Q08281 1341 aa3.94□□□□□ -1.78
CAF120YNL278W YIL177CP40434 1758 aa3.94□□□□□ -1.78
CAF120YNL278W YJL225CP40889 1758 aa3.94□□□□□ -1.78
CAF120YNL278W IFH1P39520 1085 aa3.94□□□□□ -1.78
CAF120YNL278W PEX21P50091 288 aa3.93□□□□□ -1.78
CAF120YNL278W RPL17AP05740 184 aaKnown RBP3.92□□□□□ -1.78
CAF120YNL278W RPL17BP46990 184 aaKnown RBP3.92□□□□□ -1.78
CAF120YNL278W REB1P21538 810 aa3.91□□□□□ -1.78
CAF120YNL278W LEU3P08638 886 aa3.9□□□□□ -1.78
CAF120YNL278W SAS10Q12136 610 aaPredicted RBP3.9□□□□□ -1.78
CAF120YNL278W MHP1P43638 1398 aa3.9□□□□□ -1.78
CAF120YNL278W UBP1P25037 809 aa3.9□□□□□ -1.79
CAF120YNL278W THI12P42883 340 aa3.87□□□□□ -1.79
CAF120YNL278W THI5P43534 340 aa3.87□□□□□ -1.79
CAF120YNL278W THI11P47183 340 aa3.87□□□□□ -1.79
CAF120YNL278W ORC1P54784 914 aaPredicted RBP3.87□□□□□ -1.79
CAF120YNL278W THI13Q07748 340 aa3.87□□□□□ -1.79
CAF120YNL278W DMA2P53924 522 aa3.86□□□□□ -1.79
CAF120YNL278W UGA2P38067 497 aa3.86□□□□□ -1.79
CAF120YNL278W RIM15P43565 1770 aa3.85□□□□□ -1.79
CAF120YNL278W SPT7P35177 1332 aa3.85□□□□□ -1.79
CAF120YNL278W YFR016CP43597 1233 aaKnown RBP3.85□□□□□ -1.79
CAF120YNL278W SIR4P11978 1358 aa3.84□□□□□ -1.79
CAF120YNL278W RPP0P05317 312 aaKnown RBP3.84□□□□□ -1.79
CAF120YNL278W PSK1P31374 1356 aa3.83□□□□□ -1.8
CAF120YNL278W SDH2P21801 266 aa3.83□□□□□ -1.8
CAF120YNL278W YRF1-3P0CX14 1859 aa3.83□□□□□ -1.8
CAF120YNL278W YRF1-7P0CX15 1859 aa3.83□□□□□ -1.8
CAF120YNL278W YRF1-6P53819 1859 aa3.83□□□□□ -1.8
CAF120YNL278W SRF1Q12516 437 aa3.82□□□□□ -1.8
CAF120YNL278W RPS9BP05755 195 aaKnown RBP3.81□□□□□ -1.8
CAF120YNL278W FIG2P25653 1609 aa3.81□□□□□ -1.8
CAF120YNL278W NAP1P25293 417 aaKnown RBP3.8□□□□□ -1.8
CAF120YNL278W LYS2P07702 1392 aa3.79□□□□□ -1.8
CAF120YNL278W YBL086CP38177 466 aa3.79□□□□□ -1.8
CAF120YNL278W ENP1P38333 483 aaKnown RBP3.76□□□□□ -1.81
CAF120YNL278W YRB30P53107 440 aaPredicted RBP3.76□□□□□ -1.81
CAF120YNL278W GSC2P40989 1895 aa3.76□□□□□ -1.81
CAF120YNL278W ADE6P38972 1358 aaKnown RBP3.76□□□□□ -1.81
CAF120YNL278W SSA4P22202 642 aaKnown RBP3.75□□□□□ -1.81
CAF120YNL278W ALD2P47771 506 aa3.75□□□□□ -1.81
CAF120YNL278W DUR1,2P32528 1835 aaKnown RBP3.75□□□□□ -1.81
CAF120YNL278W PRP43P53131 767 aaKnown RBP3.75□□□□□ -1.81
CAF120YNL278W EAR1Q03212 550 aa3.75□□□□□ -1.81
CAF120YNL278W AIM44Q99299 758 aa3.75□□□□□ -1.81
CAF120YNL278W SIS2P36024 562 aa3.74□□□□□ -1.81
CAF120YNL278W ETP1P38748 585 aaKnown RBP3.74□□□□□ -1.81
CAF120YNL278W CTH1P47976 325 aa3.74□□□□□ -1.81
CAF120YNL278W YCK3P39962 524 aa3.73□□□□□ -1.81
CAF120YNL278W YGL015CP33199 130 aa3.73□□□□□ -1.81
CAF120YNL278W IMH1Q06704 911 aaKnown RBP3.73□□□□□ -1.81
CAF120YNL278W YIR014WP40570 242 aa3.72□□□□□ -1.81
CAF120YNL278W ROM2P51862 1356 aaKnown RBP3.72□□□□□ -1.81
CAF120YNL278W SSA2P10592 639 aaKnown RBP3.71□□□□□ -1.81
CAF120YNL278W HKR1P41809 1802 aa3.7□□□□□ -1.82
CAF120YNL278W FAS2P19097 1887 aaKnown RBP3.7□□□□□ -1.82
CAF120YNL278W RLF2Q12495 606 aa3.7□□□□□ -1.82
CAF120YNL278W SPT21P35209 758 aa3.69□□□□□ -1.82
CAF120YNL278W AUS1Q08409 1394 aa3.69□□□□□ -1.82
CAF120YNL278W SSP1P38871 571 aa3.68□□□□□ -1.82
CAF120YNL278W RIM101P33400 625 aa3.67□□□□□ -1.82
CAF120YNL278W YVH1Q02256 364 aaKnown RBP3.67□□□□□ -1.82
CAF120YNL278W NOP8Q08287 484 aaPredicted RBP3.67□□□□□ -1.82
CAF120YNL278W RPN1P38764 993 aaKnown RBP3.66□□□□□ -1.82
CAF120YNL278W TYW1Q08960 810 aaKnown RBP3.66□□□□□ -1.82
CAF120YNL278W EBP2P36049 427 aaKnown RBP3.65□□□□□ -1.83
CAF120YNL278W YNR014WP53719 212 aa3.65□□□□□ -1.83
CAF120YNL278W APP1P53933 587 aa3.64□□□□□ -1.83
CAF120YNL278W YEF3P16521 1044 aaKnown RBP3.64□□□□□ -1.83
CAF120YNL278W ESL2P36168 1195 aa3.64□□□□□ -1.83
CAF120YNL278W TAP42Q04372 366 aa3.64□□□□□ -1.83
CAF120YNL278W MAL31P38156 614 aa3.63□□□□□ -1.83
CAF120YNL278W OXP1P28273 1286 aa3.63□□□□□ -1.83
CAF120YNL278W ATG36P46983 293 aa3.62□□□□□ -1.83
CAF120YNL278W DLD1P32891 587 aa3.62□□□□□ -1.83
CAF120YNL278W POL5P39985 1022 aaKnown RBP3.62□□□□□ -1.83
CAF120YNL278W KRI1P42846 591 aaKnown RBP3.62□□□□□ -1.83
CAF120YNL278W FKH1P40466 484 aa3.61□□□□□ -1.83
CAF120YNL278W CKB1P43639 278 aa3.61□□□□□ -1.83
CAF120YNL278W HGH1P48362 394 aaKnown RBP3.61□□□□□ -1.83
CAF120YNL278W FRK1Q03002 865 aaPredicted RBP3.61□□□□□ -1.83
CAF120YNL278W YLR271WQ06152 274 aa3.61□□□□□ -1.83
CAF120YNL278W RPO41P13433 1351 aaKnown RBP3.61□□□□□ -1.83
CAF120YNL278W RTT106P40161 455 aa3.61□□□□□ -1.83
CAF120YNL278W RPS0BP46654 252 aaKnown RBP3.61□□□□□ -1.83
CAF120YNL278W YML020WQ03722 664 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms