RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	PRE3	P38624	215 aa		6.51	□□□□□ -1.37
TPM1	YNL079C	MMP1	Q12372	583 aa		6.51	□□□□□ -1.37
TPM1	YNL079C	RAM1	P22007	431 aa		6.49	□□□□□ -1.37
TPM1	YNL079C	RTF1	P53064	558 aa		6.49	□□□□□ -1.37
TPM1	YNL079C	CHL1	P22516	861 aa	Predicted RBP	6.48	□□□□□ -1.37
TPM1	YNL079C	ESS1	P22696	170 aa		6.48	□□□□□ -1.37
TPM1	YNL079C	NPL4	P33755	580 aa		6.48	□□□□□ -1.37
TPM1	YNL079C	BRL1	P38770	471 aa		6.48	□□□□□ -1.37
TPM1	YNL079C	STR2	P47164	639 aa		6.48	□□□□□ -1.37
TPM1	YNL079C	YNL115C	P53925	644 aa		6.48	□□□□□ -1.37
TPM1	YNL079C	KEX2	P13134	814 aa		6.47	□□□□□ -1.37
TPM1	YNL079C	PTC2	P39966	464 aa	Known RBP	6.47	□□□□□ -1.37
TPM1	YNL079C	ISM1	P48526	1002 aa		6.47	□□□□□ -1.37
TPM1	YNL079C	ERF2	Q06551	359 aa		6.47	□□□□□ -1.37
TPM1	YNL079C	SLY41	P22215	453 aa		6.46	□□□□□ -1.38
TPM1	YNL079C	PKC1	P24583	1151 aa		6.46	□□□□□ -1.38
TPM1	YNL079C	YML082W	Q04533	649 aa	Known RBP	6.46	□□□□□ -1.38
TPM1	YNL079C	PKH3	Q03306	898 aa	Predicted RBP	6.45	□□□□□ -1.38
TPM1	YNL079C	YPR015C	Q12531	247 aa		6.45	□□□□□ -1.38
TPM1	YNL079C	YJU3	P28321	313 aa		6.44	□□□□□ -1.38
TPM1	YNL079C	BUD20	Q08004	166 aa	Predicted RBP	6.44	□□□□□ -1.38
TPM1	YNL079C	GCD11	P32481	527 aa	Known RBP	6.43	□□□□□ -1.38
TPM1	YNL079C	RAD59	Q12223	238 aa		6.43	□□□□□ -1.38
TPM1	YNL079C	TY1A-DR4	O74302	440 aa		6.41	□□□□□ -1.38
TPM1	YNL079C	TY1A-H	P0C2I4	478 aa	Known RBP	6.41	□□□□□ -1.38
TPM1	YNL079C	TY1A-A	P0CX57	440 aa		6.41	□□□□□ -1.38
TPM1	YNL079C	TY1A-PR1	P0CX58	440 aa		6.41	□□□□□ -1.38
TPM1	YNL079C	TY1A-OR	P0CX59	440 aa		6.41	□□□□□ -1.38
TPM1	YNL079C	TY1A-PR2	P0CX60	440 aa		6.41	□□□□□ -1.38
TPM1	YNL079C	TY1A-DR5	P0CX65	440 aa		6.41	□□□□□ -1.38
TPM1	YNL079C	TY1A-ER2	P0CX66	440 aa		6.41	□□□□□ -1.38
TPM1	YNL079C	TY1A-GR3	P0CX67	440 aa		6.41	□□□□□ -1.38
TPM1	YNL079C	TY1A-LR1	P0CX68	440 aa		6.41	□□□□□ -1.38
TPM1	YNL079C	TY1A-MR2	P0CX69	440 aa		6.41	□□□□□ -1.38
TPM1	YNL079C	SEC2	P17065	759 aa		6.41	□□□□□ -1.38
TPM1	YNL079C	RSC30	P38781	883 aa		6.41	□□□□□ -1.38
TPM1	YNL079C	TY1A-JR2	P47099	440 aa		6.41	□□□□□ -1.38
TPM1	YNL079C	TY1A-DR1	Q03856	440 aa		6.41	□□□□□ -1.38
TPM1	YNL079C	TY1A-ML1	Q04706	440 aa	Known RBP	6.41	□□□□□ -1.38
TPM1	YNL079C	TY1A-BR	Q12217	440 aa		6.41	□□□□□ -1.38
TPM1	YNL079C	TY1A-NL2	Q12470	440 aa		6.41	□□□□□ -1.38
TPM1	YNL079C	TY1A-GR2	Q12485	440 aa		6.41	□□□□□ -1.38
TPM1	YNL079C	ARG8	P18544	423 aa		6.4	□□□□□ -1.38
TPM1	YNL079C	PRT1	P06103	763 aa	Known RBP	6.39	□□□□□ -1.39
TPM1	YNL079C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	6.39	□□□□□ -1.39	not detected
TPM1	YNL079C	PUS6	P53294	404 aa		6.39	□□□□□ -1.39
TPM1	YNL079C	LAM6	Q08001	693 aa		6.39	□□□□□ -1.39
TPM1	YNL079C	RLF2	Q12495	606 aa		6.39	□□□□□ -1.39
TPM1	YNL079C	TRM1	P15565	570 aa	Known RBP	6.38	□□□□□ -1.39
TPM1	YNL079C	AGE1	Q04412	482 aa		6.38	□□□□□ -1.39
TPM1	YNL079C	YBL036C	P38197	257 aa		6.37	□□□□□ -1.39
TPM1	YNL079C	TUB4	P53378	473 aa		6.37	□□□□□ -1.39
TPM1	YNL079C	CSE4	P36012	229 aa		6.36	□□□□□ -1.39
TPM1	YNL079C	YJL007C	P47080	104 aa		6.36	□□□□□ -1.39
TPM1	YNL079C	BIM1	P40013	344 aa		6.35	□□□□□ -1.39
TPM1	YNL079C	TBF1	Q02457	562 aa		6.34	□□□□□ -1.39
TPM1	YNL079C	ATG32	P40458	529 aa		6.33	□□□□□ -1.4
TPM1	YNL079C	RRN7	P40992	514 aa		6.33	□□□□□ -1.4
TPM1	YNL079C	BIO2	P32451	375 aa		6.32	□□□□□ -1.4
TPM1	YNL079C	VRP1	P37370	817 aa		6.32	□□□□□ -1.4
TPM1	YNL079C	PAC1	P39946	494 aa	Known RBP	6.32	□□□□□ -1.4
TPM1	YNL079C	SAS4	Q04003	481 aa		6.32	□□□□□ -1.4
TPM1	YNL079C	GYP1	Q08484	637 aa		6.32	□□□□□ -1.4
TPM1	YNL079C	YDL206W	Q12424	762 aa		6.32	□□□□□ -1.4
TPM1	YNL079C	MAK16	P10962	306 aa	Predicted RBP	6.31	□□□□□ -1.4
TPM1	YNL079C	PAT1	P25644	796 aa	Known RBP	6.3	□□□□□ -1.4
TPM1	YNL079C	SPT16	P32558	1035 aa	Known RBP	6.3	□□□□□ -1.4
TPM1	YNL079C	RPA14	P50106	137 aa		6.3	□□□□□ -1.4
TPM1	YNL079C	YPR097W	Q06839	1073 aa		6.29	□□□□□ -1.4
TPM1	YNL079C	TIF1	P10081	395 aa	Known RBP	6.28	□□□□□ -1.4
TPM1	YNL079C	SUP45	P12385	437 aa	Known RBP	6.28	□□□□□ -1.4
TPM1	YNL079C	SPT5	P27692	1063 aa	Known RBP	6.28	□□□□□ -1.4
TPM1	YNL079C	BCK2	P33306	851 aa		6.28	□□□□□ -1.4
TPM1	YNL079C	RPL34B	P40525	121 aa	Known RBP	6.27	□□□□□ -1.41
TPM1	YNL079C	YNL108C	P53929	270 aa		6.27	□□□□□ -1.41
TPM1	YNL079C	ALR1	Q08269	859 aa		6.27	□□□□□ -1.41
TPM1	YNL079C	PDC1	P06169	563 aa	Known RBP	6.26	□□□□□ -1.41
TPM1	YNL079C	YDJ1	P25491	409 aa	Known RBP	6.26	□□□□□ -1.41
TPM1	YNL079C	KXD1	P53158	218 aa		6.26	□□□□□ -1.41
TPM1	YNL079C	NAF1	P53919	492 aa	Known RBP	6.26	□□□□□ -1.41
TPM1	YNL079C	ERG12	P07277	443 aa		6.25	□□□□□ -1.41
TPM1	YNL079C	MOD5	P07884	428 aa		6.24	□□□□□ -1.41
TPM1	YNL079C	MRF1	P30775	413 aa	Predicted RBP	6.24	□□□□□ -1.41
TPM1	YNL079C	HXT10	P43581	546 aa		6.24	□□□□□ -1.41
TPM1	YNL079C	ENO2	P00925	437 aa	Known RBP	6.23	□□□□□ -1.41
TPM1	YNL079C	SDH2	P21801	266 aa		6.23	□□□□□ -1.41
TPM1	YNL079C	TPD3	P31383	635 aa		6.23	□□□□□ -1.41
TPM1	YNL079C	RTG2	P32608	588 aa	Known RBP	6.23	□□□□□ -1.41
TPM1	YNL079C	XDJ1	P39102	459 aa		6.21	□□□□□ -1.42
TPM1	YNL079C	YPR204W	Q08995	1032 aa		6.21	□□□□□ -1.42
TPM1	YNL079C	RRD1	P40454	393 aa	Known RBP	6.2	□□□□□ -1.42
TPM1	YNL079C	FIG4	P42837	879 aa		6.2	□□□□□ -1.42
TPM1	YNL079C	MCM16	Q12262	181 aa		6.2	□□□□□ -1.42
TPM1	YNL079C	RIM21	P48565	533 aa		6.19	□□□□□ -1.42
TPM1	YNL079C	ENO1	P00924	437 aa	Known RBP	6.18	□□□□□ -1.42
TPM1	YNL079C	TEC1	P18412	486 aa		6.18	□□□□□ -1.42
TPM1	YNL079C	YPP1	P46951	817 aa		6.18	□□□□□ -1.42
TPM1	YNL079C	MRX10	Q05648	414 aa		6.18	□□□□□ -1.42
TPM1	YNL079C	VAC17	P25591	423 aa		6.17	□□□□□ -1.42
TPM1	YNL079C	YPR084W	Q06821	456 aa		6.17	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms