RNA–Protein interactions for RNA: YNL026W

SAM50, Transcript of Component of the Sorting and Assembly Machinery (SAM) complex, yeastyeast

Gene SAM50, Length 1,455 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAM50YNL026W NAP1P25293 417 aaKnown RBP11.86□□□□□ -0.51
SAM50YNL026W RRP5Q05022 1729 aaKnown RBP11.85□□□□□ -0.51
SAM50YNL026W RCM1P53972 490 aa11.83□□□□□ -0.52
SAM50YNL026W TAF8Q03750 510 aa11.83□□□□□ -0.52
SAM50YNL026W PRP5P21372 849 aaPredicted RBP11.83□□□□□ -0.52
SAM50YNL026W NOP7P53261 605 aaKnown RBP11.83□□□□□ -0.52
SAM50YNL026W YRF1-2P40105 1681 aa11.8□□□□□ -0.52
SAM50YNL026W LEU3P08638 886 aa11.8□□□□□ -0.52
SAM50YNL026W UBP1P25037 809 aa11.8□□□□□ -0.52
SAM50YNL026W PPH3P32345 308 aa11.78□□□□□ -0.52
SAM50YNL026W ESL2P36168 1195 aa11.77□□□□□ -0.52
SAM50YNL026W RPN11P43588 306 aaKnown RBP11.77□□□□□ -0.52
SAM50YNL026W DOT5P40553 215 aa11.76□□□□□ -0.53
SAM50YNL026W YBL086CP38177 466 aa11.75□□□□□ -0.53
SAM50YNL026W MSB3P48566 633 aaPredicted RBP11.75□□□□□ -0.53
SAM50YNL026W PSK1P31374 1356 aa11.74□□□□□ -0.53
SAM50YNL026W IES2P40154 320 aa11.73□□□□□ -0.53
SAM50YNL026W ADE6P38972 1358 aaKnown RBP11.73□□□□□ -0.53
SAM50YNL026W GTT3P39996 337 aa11.7□□□□□ -0.54
SAM50YNL026W UGA2P38067 497 aa11.69□□□□□ -0.54
SAM50YNL026W EDE1P34216 1381 aa11.68□□□□□ -0.54
SAM50YNL026W NPR2P39923 615 aa11.68□□□□□ -0.54
SAM50YNL026W LYS4P49367 693 aaPredicted RBP11.68□□□□□ -0.54
SAM50YNL026W FOX2Q02207 900 aaKnown RBP11.68□□□□□ -0.54
SAM50YNL026W TCB1Q12466 1186 aa11.67□□□□□ -0.54
SAM50YNL026W ROM2P51862 1356 aaKnown RBP11.66□□□□□ -0.54
SAM50YNL026W RSF2P46974 1380 aa11.65□□□□□ -0.55
SAM50YNL026W SSA1P10591 642 aaKnown RBP11.64□□□□□ -0.55
SAM50YNL026W SLM3Q12093 417 aa11.63□□□□□ -0.55
SAM50YNL026W YEF3P16521 1044 aaKnown RBP11.63□□□□□ -0.55
SAM50YNL026W TY4B-HP0C2J7 1802 aa11.63□□□□□ -0.55
SAM50YNL026W TY4B-JP47024 1803 aa11.63□□□□□ -0.55
SAM50YNL026W YJL181WP46987 611 aa11.62□□□□□ -0.55
SAM50YNL026W ALD2P47771 506 aa11.62□□□□□ -0.55
SAM50YNL026W URB1P34241 1764 aaKnown RBP11.61□□□□□ -0.55
SAM50YNL026W SSA2P10592 639 aaKnown RBP11.61□□□□□ -0.55
SAM50YNL026W SPE2P21182 396 aa11.6□□□□□ -0.55
SAM50YNL026W PRP43P53131 767 aaKnown RBP11.6□□□□□ -0.55
SAM50YNL026W CTH1P47976 325 aa11.58□□□□□ -0.56
SAM50YNL026W LAM6Q08001 693 aa11.58□□□□□ -0.56
SAM50YNL026W LEU2P04173 364 aaPredicted RBP11.56□□□□□ -0.56
SAM50YNL026W PRP40P33203 583 aaKnown RBP11.56□□□□□ -0.56
SAM50YNL026W YKL133CP36066 463 aa11.56□□□□□ -0.56
SAM50YNL026W CSE4P36012 229 aa11.55□□□□□ -0.56
SAM50YNL026W MTR4P47047 1073 aaKnown RBP11.55□□□□□ -0.56
SAM50YNL026W KIP3P53086 805 aaKnown RBP11.55□□□□□ -0.56
SAM50YNL026W COBP00163 385 aa11.54□□□□□ -0.56
SAM50YNL026W RPS24AP0CX31 135 aaKnown RBP11.53□□□□□ -0.56
SAM50YNL026W RPS24BP0CX32 135 aaKnown RBP11.53□□□□□ -0.56
SAM50YNL026W YKR075CP36155 307 aa11.53□□□□□ -0.56
SAM50YNL026W ENP1P38333 483 aaKnown RBP11.51□□□□□ -0.57
SAM50YNL026W XKS1P42826 600 aa11.51□□□□□ -0.57
SAM50YNL026W CHZ1P40019 153 aaPredicted RBP11.5□□□□□ -0.57
SAM50YNL026W FKS3Q04952 1785 aa11.47□□□□□ -0.57
SAM50YNL026W YRF1-4O13559 1382 aa11.46□□□□□ -0.57
SAM50YNL026W YRF1-3P0CX14 1859 aa11.46□□□□□ -0.58
SAM50YNL026W YRF1-7P0CX15 1859 aa11.46□□□□□ -0.58
SAM50YNL026W YRF1-6P53819 1859 aa11.46□□□□□ -0.58
SAM50YNL026W SPT7P35177 1332 aa11.4□□□□□ -0.59
SAM50YNL026W BDF1P35817 686 aa11.39□□□□□ -0.59
SAM50YNL026W YML133CQ03099 1374 aa11.39□□□□□ -0.59
SAM50YNL026W YLL067CQ07888 1374 aa11.39□□□□□ -0.59
SAM50YNL026W YLL066CQ99208 1374 aa11.39□□□□□ -0.59
SAM50YNL026W YLR419WQ06698 1435 aaKnown RBP11.38□□□□□ -0.59
SAM50YNL026W FRK1Q03002 865 aaPredicted RBP11.38□□□□□ -0.59
SAM50YNL026W MEC3Q02574 474 aa11.37□□□□□ -0.59
SAM50YNL026W APC1P53886 1748 aa11.36□□□□□ -0.59
SAM50YNL026W RPG1P38249 964 aaKnown RBP11.36□□□□□ -0.59
SAM50YNL026W ALD3P54114 506 aa11.36□□□□□ -0.59
SAM50YNL026W RCR1P38212 213 aa11.35□□□□□ -0.59
SAM50YNL026W ADE16P54113 591 aaKnown RBP11.35□□□□□ -0.59
SAM50YNL026W MSB4Q12317 492 aa11.34□□□□□ -0.59
SAM50YNL026W DPS1P04802 557 aaKnown RBP11.33□□□□□ -0.6
SAM50YNL026W ORC1P54784 914 aaPredicted RBP11.33□□□□□ -0.6
SAM50YNL026W SIR4P11978 1358 aa11.33□□□□□ -0.6
SAM50YNL026W GAS4Q08271 471 aa11.32□□□□□ -0.6
SAM50YNL026W YIL177CP40434 1758 aa11.31□□□□□ -0.6
SAM50YNL026W YJL225CP40889 1758 aa11.31□□□□□ -0.6
SAM50YNL026W RPO41P13433 1351 aaKnown RBP11.29□□□□□ -0.6
SAM50YNL026W SCT1P32784 759 aa11.29□□□□□ -0.6
SAM50YNL026W EAF6P47128 113 aa11.29□□□□□ -0.6
SAM50YNL026W RRD1P40454 393 aaKnown RBP11.28□□□□□ -0.6
SAM50YNL026W BUG1Q12191 341 aa11.27□□□□□ -0.6
SAM50YNL026W TOS1P38288 455 aa11.26□□□□□ -0.61
SAM50YNL026W FKH1P40466 484 aa11.26□□□□□ -0.61
SAM50YNL026W RTF1P53064 558 aa11.26□□□□□ -0.61
SAM50YNL026W ATG13Q06628 738 aa11.26□□□□□ -0.61
SAM50YNL026W GRE2Q12068 342 aaKnown RBP11.25□□□□□ -0.61
SAM50YNL026W PDI1P17967 522 aaKnown RBP11.25□□□□□ -0.61
SAM50YNL026W SAP155P43612 1002 aa11.25□□□□□ -0.61
SAM50YNL026W SNF2P22082 1703 aa11.24□□□□□ -0.61
SAM50YNL026W RAD4P14736 754 aa11.24□□□□□ -0.61
SAM50YNL026W UTP22P53254 1237 aaPredicted RBP11.24□□□□□ -0.61
SAM50YNL026W OSM1P21375 501 aaKnown RBP11.2□□□□□ -0.62
SAM50YNL026W GRX1P25373 110 aaKnown RBP11.2□□□□□ -0.62
SAM50YNL026W MSN5P52918 1224 aa11.19□□□□□ -0.62
SAM50YNL026W SEC3P33332 1336 aaKnown RBP11.19□□□□□ -0.62
SAM50YNL026W TAP42Q04372 366 aa11.19□□□□□ -0.62
SAM50YNL026W INP54Q08227 384 aaKnown RBP11.19□□□□□ -0.62
SAM50YNL026W AUS1Q08409 1394 aa11.18□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms