RNA–Protein interactions for RNA: YMR296C

LCB1, Transcript of Component of serine palmitoyltransferase, yeastyeast

Gene LCB1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB1YMR296C REB1P21538 810 aa15.38■□□□□ 0.05
LCB1YMR296C RRP5Q05022 1729 aaKnown RBP15.33■□□□□ 0.04
LCB1YMR296C ENT1Q12518 454 aa15.32■□□□□ 0.04
LCB1YMR296C SPT7P35177 1332 aa15.31■□□□□ 0.04
LCB1YMR296C YIL055CP40523 627 aaKnown RBP15.31■□□□□ 0.04
LCB1YMR296C PSK1P31374 1356 aa15.3■□□□□ 0.04
LCB1YMR296C YLR419WQ06698 1435 aaKnown RBP15.3■□□□□ 0.04
LCB1YMR296C TY4B-HP0C2J7 1802 aa15.29■□□□□ 0.04
LCB1YMR296C TY4B-JP47024 1803 aa15.29■□□□□ 0.04
LCB1YMR296C ORC1P54784 914 aaPredicted RBP15.28■□□□□ 0.04
LCB1YMR296C ENV9Q08651 330 aa15.27■□□□□ 0.03
LCB1YMR296C SEC3P33332 1336 aaKnown RBP15.26■□□□□ 0.03
LCB1YMR296C GLN1P32288 370 aaKnown RBP15.25■□□□□ 0.03
LCB1YMR296C ADE6P38972 1358 aaKnown RBP15.25■□□□□ 0.03
LCB1YMR296C PRP45P28004 379 aaPredicted RBP15.25■□□□□ 0.03
LCB1YMR296C ENP1P38333 483 aaKnown RBP15.23■□□□□ 0.03
LCB1YMR296C CHZ1P40019 153 aaPredicted RBP15.22■□□□□ 0.03
LCB1YMR296C YRF1-2P40105 1681 aa15.22■□□□□ 0.03
LCB1YMR296C MHP1P43638 1398 aa15.18■□□□□ 0.02
LCB1YMR296C PRP5P21372 849 aaPredicted RBP15.18■□□□□ 0.02
LCB1YMR296C IMH1Q06704 911 aaKnown RBP15.16■□□□□ 0.02
LCB1YMR296C YML133CQ03099 1374 aa15.13■□□□□ 0.01
LCB1YMR296C YLL067CQ07888 1374 aa15.13■□□□□ 0.01
LCB1YMR296C YLL066CQ99208 1374 aa15.13■□□□□ 0.01
LCB1YMR296C LEU2P04173 364 aaPredicted RBP15.13■□□□□ 0.01
LCB1YMR296C PRP43P53131 767 aaKnown RBP15.12■□□□□ 0.01
LCB1YMR296C MTR4P47047 1073 aaKnown RBP15.11■□□□□ 0.01
LCB1YMR296C MSB3P48566 633 aaPredicted RBP15.11■□□□□ 0.01
LCB1YMR296C PSD2P53037 1138 aaKnown RBP15.09■□□□□ 0.01
LCB1YMR296C YMR074CQ04773 145 aa15.09■□□□□ 0.01
LCB1YMR296C LEU3P08638 886 aa15.08■□□□□ 0
LCB1YMR296C CSE4P36012 229 aa15.08■□□□□ 0
LCB1YMR296C SCT1P32784 759 aa15.07■□□□□ 0
LCB1YMR296C RPS24AP0CX31 135 aaKnown RBP15.06■□□□□ 0
LCB1YMR296C RPS24BP0CX32 135 aaKnown RBP15.06■□□□□ 0
LCB1YMR296C FKH1P40466 484 aa15.03■□□□□ -0
LCB1YMR296C YIL177CP40434 1758 aa15.02□□□□□ -0.01
LCB1YMR296C YJL225CP40889 1758 aa15.02□□□□□ -0.01
LCB1YMR296C SLM3Q12093 417 aa15.02□□□□□ -0.01
LCB1YMR296C URB1P34241 1764 aaKnown RBP15.01□□□□□ -0.01
LCB1YMR296C MLP1Q02455 1875 aaKnown RBP15.01□□□□□ -0.01
LCB1YMR296C NOP2P40991 618 aaKnown RBP15□□□□□ -0.01
LCB1YMR296C TCB1Q12466 1186 aa15□□□□□ -0.01
LCB1YMR296C IES2P40154 320 aa14.98□□□□□ -0.01
LCB1YMR296C PDS5Q04264 1277 aa14.98□□□□□ -0.01
LCB1YMR296C RSF2P46974 1380 aa14.98□□□□□ -0.01
LCB1YMR296C RTG3P38165 486 aa14.97□□□□□ -0.01
LCB1YMR296C FKS3Q04952 1785 aa14.94□□□□□ -0.02
LCB1YMR296C YRF1-3P0CX14 1859 aa14.94□□□□□ -0.02
LCB1YMR296C YRF1-7P0CX15 1859 aa14.94□□□□□ -0.02
LCB1YMR296C YRF1-6P53819 1859 aa14.94□□□□□ -0.02
LCB1YMR296C NST1P53935 1240 aa14.93□□□□□ -0.02
LCB1YMR296C PRS1P32895 427 aaKnown RBP14.92□□□□□ -0.02
LCB1YMR296C BUD31P25337 157 aaPredicted RBP14.91□□□□□ -0.02
LCB1YMR296C DOT5P40553 215 aa14.91□□□□□ -0.02
LCB1YMR296C APC1P53886 1748 aa14.9□□□□□ -0.02
LCB1YMR296C XKS1P42826 600 aa14.89□□□□□ -0.03
LCB1YMR296C PDI1P17967 522 aaKnown RBP14.88□□□□□ -0.03
LCB1YMR296C ROM2P51862 1356 aaKnown RBP14.88□□□□□ -0.03
LCB1YMR296C DPS1P04802 557 aaKnown RBP14.87□□□□□ -0.03
LCB1YMR296C PRI1P10363 409 aa14.87□□□□□ -0.03
LCB1YMR296C GAS4Q08271 471 aa14.87□□□□□ -0.03
LCB1YMR296C RTF1P53064 558 aa14.86□□□□□ -0.03
LCB1YMR296C FOX2Q02207 900 aaKnown RBP14.86□□□□□ -0.03
LCB1YMR296C RPN11P43588 306 aaKnown RBP14.85□□□□□ -0.03
LCB1YMR296C AUS1Q08409 1394 aa14.85□□□□□ -0.03
LCB1YMR296C TAP42Q04372 366 aa14.83□□□□□ -0.04
LCB1YMR296C YKL133CP36066 463 aa14.81□□□□□ -0.04
LCB1YMR296C HIM1Q06674 414 aa14.79□□□□□ -0.04
LCB1YMR296C YEF3P16521 1044 aaKnown RBP14.78□□□□□ -0.04
LCB1YMR296C GRX4P32642 244 aa14.78□□□□□ -0.04
LCB1YMR296C UBP1P25037 809 aa14.77□□□□□ -0.04
LCB1YMR296C NPR2P39923 615 aa14.75□□□□□ -0.05
LCB1YMR296C COBP00163 385 aa14.74□□□□□ -0.05
LCB1YMR296C RCR1P38212 213 aa14.74□□□□□ -0.05
LCB1YMR296C SIR4P11978 1358 aa14.74□□□□□ -0.05
LCB1YMR296C EDE1P34216 1381 aa14.74□□□□□ -0.05
LCB1YMR296C YRF1-4O13559 1382 aa14.72□□□□□ -0.05
LCB1YMR296C YKR075CP36155 307 aa14.72□□□□□ -0.05
LCB1YMR296C SNF2P22082 1703 aa14.72□□□□□ -0.05
LCB1YMR296C LAM6Q08001 693 aa14.7□□□□□ -0.06
LCB1YMR296C YJL181WP46987 611 aa14.69□□□□□ -0.06
LCB1YMR296C LYS4P49367 693 aaPredicted RBP14.68□□□□□ -0.06
LCB1YMR296C ADE16P54113 591 aaKnown RBP14.68□□□□□ -0.06
LCB1YMR296C FRK1Q03002 865 aaPredicted RBP14.68□□□□□ -0.06
LCB1YMR296C KAR2P16474 682 aaKnown RBP14.68□□□□□ -0.06
LCB1YMR296C MEC3Q02574 474 aa14.68□□□□□ -0.06
LCB1YMR296C PRP40P33203 583 aaKnown RBP14.67□□□□□ -0.06
LCB1YMR296C RPO41P13433 1351 aaKnown RBP14.65□□□□□ -0.06
LCB1YMR296C TRK1P12685 1235 aa14.65□□□□□ -0.06
LCB1YMR296C YBL086CP38177 466 aa14.65□□□□□ -0.06
LCB1YMR296C BUB1P41695 1021 aaKnown RBP RIP-Chip data14.62□□□□□ -0.07not detected
LCB1YMR296C GTT3P39996 337 aa14.59□□□□□ -0.07
LCB1YMR296C CTH1P47976 325 aa14.59□□□□□ -0.07
LCB1YMR296C INP54Q08227 384 aaKnown RBP14.59□□□□□ -0.07
LCB1YMR296C DSD1P53095 428 aa14.57□□□□□ -0.08
LCB1YMR296C RIM15P43565 1770 aa14.57□□□□□ -0.08
LCB1YMR296C PAP2P53632 584 aaKnown RBP14.56□□□□□ -0.08
LCB1YMR296C UGA2P38067 497 aa14.55□□□□□ -0.08
LCB1YMR296C ALD2P47771 506 aa14.55□□□□□ -0.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms