RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W CHD1P32657 1468 aa2.8□□□□□ -1.96
RTP1YMR185W YPR148CQ06523 435 aa2.8□□□□□ -1.96
RTP1YMR185W AIR1P40507 360 aaKnown RBP2.79□□□□□ -1.96
RTP1YMR185W COX6P00427 148 aa2.79□□□□□ -1.96
RTP1YMR185W KEX2P13134 814 aa2.79□□□□□ -1.96
RTP1YMR185W MVP1P40959 511 aaKnown RBP2.79□□□□□ -1.96
RTP1YMR185W CLA4P48562 842 aa2.79□□□□□ -1.96
RTP1YMR185W HSL1P34244 1518 aa2.78□□□□□ -1.96
RTP1YMR185W PBS2P08018 668 aa2.77□□□□□ -1.97
RTP1YMR185W TY1A-DR4O74302 440 aa2.77□□□□□ -1.97
RTP1YMR185W TY1A-HP0C2I4 478 aaKnown RBP2.77□□□□□ -1.97
RTP1YMR185W TY1A-AP0CX57 440 aa2.77□□□□□ -1.97
RTP1YMR185W TY1A-PR1P0CX58 440 aa2.77□□□□□ -1.97
RTP1YMR185W TY1A-ORP0CX59 440 aa2.77□□□□□ -1.97
RTP1YMR185W TY1A-PR2P0CX60 440 aa2.77□□□□□ -1.97
RTP1YMR185W TY1A-DR5P0CX65 440 aa2.77□□□□□ -1.97
RTP1YMR185W TY1A-ER2P0CX66 440 aa2.77□□□□□ -1.97
RTP1YMR185W TY1A-GR3P0CX67 440 aa2.77□□□□□ -1.97
RTP1YMR185W TY1A-LR1P0CX68 440 aa2.77□□□□□ -1.97
RTP1YMR185W TY1A-MR2P0CX69 440 aa2.77□□□□□ -1.97
RTP1YMR185W GAP1P19145 602 aaPredicted RBP2.77□□□□□ -1.97
RTP1YMR185W BDP1P46678 594 aa2.77□□□□□ -1.97
RTP1YMR185W TY1A-JR2P47099 440 aa2.77□□□□□ -1.97
RTP1YMR185W TY1A-DR1Q03856 440 aa2.77□□□□□ -1.97
RTP1YMR185W TY1A-ML1Q04706 440 aaKnown RBP2.77□□□□□ -1.97
RTP1YMR185W LAM6Q08001 693 aa2.77□□□□□ -1.97
RTP1YMR185W TY1A-BRQ12217 440 aa2.77□□□□□ -1.97
RTP1YMR185W TY1A-NL2Q12470 440 aa2.77□□□□□ -1.97
RTP1YMR185W TY1A-GR2Q12485 440 aa2.77□□□□□ -1.97
RTP1YMR185W RGR1P19263 1082 aa2.76□□□□□ -1.97
RTP1YMR185W CKB1P43639 278 aa2.76□□□□□ -1.97
RTP1YMR185W MAM3Q12296 706 aa2.76□□□□□ -1.97
RTP1YMR185W SIN3P22579 1536 aa2.76□□□□□ -1.97
RTP1YMR185W CDC4P07834 779 aa2.75□□□□□ -1.97
RTP1YMR185W SPT6P23615 1451 aaKnown RBP2.75□□□□□ -1.97
RTP1YMR185W THO2P53552 1597 aaKnown RBP2.75□□□□□ -1.97
RTP1YMR185W HST3P53687 447 aa2.75□□□□□ -1.97
RTP1YMR185W ERF2Q06551 359 aa2.75□□□□□ -1.97
RTP1YMR185W SEC2P17065 759 aa2.75□□□□□ -1.97
RTP1YMR185W IES2P40154 320 aa2.75□□□□□ -1.97
RTP1YMR185W YMR196WQ04336 1088 aa2.75□□□□□ -1.97
RTP1YMR185W SPB4P25808 606 aaPredicted RBP2.74□□□□□ -1.97
RTP1YMR185W CLB5P30283 435 aa2.74□□□□□ -1.97
RTP1YMR185W HIR3P47171 1648 aa2.74□□□□□ -1.97
RTP1YMR185W PUS5Q06244 254 aa2.74□□□□□ -1.97
RTP1YMR185W XRN1P22147 1528 aaKnown RBP2.73□□□□□ -1.97
RTP1YMR185W PAC1P39946 494 aaKnown RBP2.73□□□□□ -1.97
RTP1YMR185W SSK2P53599 1579 aa2.72□□□□□ -1.97
RTP1YMR185W PSE1P32337 1089 aaKnown RBP2.72□□□□□ -1.97
RTP1YMR185W KXD1P53158 218 aa2.72□□□□□ -1.97
RTP1YMR185W TBF1Q02457 562 aa2.72□□□□□ -1.97
RTP1YMR185W YPL062WQ02781 134 aa2.72□□□□□ -1.97
RTP1YMR185W HED1Q03937 162 aa2.72□□□□□ -1.97
RTP1YMR185W ASH1P34233 588 aa2.72□□□□□ -1.97
RTP1YMR185W DMA1P38823 416 aa2.72□□□□□ -1.97
RTP1YMR185W TEA1P47988 759 aa2.71□□□□□ -1.98
RTP1YMR185W TUB4P53378 473 aa2.71□□□□□ -1.98
RTP1YMR185W MMS22Q06164 1454 aa2.71□□□□□ -1.98
RTP1YMR185W REV3P14284 1504 aa2.7□□□□□ -1.98
RTP1YMR185W SRF1Q12516 437 aa2.7□□□□□ -1.98
RTP1YMR185W MYO2P19524 1574 aaKnown RBP2.7□□□□□ -1.98
RTP1YMR185W MON2P48563 1636 aaPredicted RBP2.7□□□□□ -1.98
RTP1YMR185W SLY41P22215 453 aa2.69□□□□□ -1.98
RTP1YMR185W KIP2P28743 706 aa2.69□□□□□ -1.98
RTP1YMR185W YNL115CP53925 644 aa2.69□□□□□ -1.98
RTP1YMR185W YDR444WQ04093 687 aa2.69□□□□□ -1.98
RTP1YMR185W MET22P32179 357 aa2.69□□□□□ -1.98
RTP1YMR185W ESP1Q03018 1630 aa2.69□□□□□ -1.98
RTP1YMR185W MET32Q12041 191 aa2.68□□□□□ -1.98
RTP1YMR185W SWR1Q05471 1514 aa2.68□□□□□ -1.98
RTP1YMR185W UGA3P26370 528 aa2.68□□□□□ -1.98
RTP1YMR185W RTF1P53064 558 aa2.68□□□□□ -1.98
RTP1YMR185W ENV9Q08651 330 aa2.67□□□□□ -1.98
RTP1YMR185W STU1P38198 1513 aa2.67□□□□□ -1.98
RTP1YMR185W SYH1Q02875 849 aaKnown RBP2.67□□□□□ -1.98
RTP1YMR185W POL1P13382 1468 aa2.66□□□□□ -1.98
RTP1YMR185W AFT1P22149 690 aa2.66□□□□□ -1.98
RTP1YMR185W ATF2P53296 535 aa2.66□□□□□ -1.98
RTP1YMR185W UFD4P33202 1483 aa2.66□□□□□ -1.98
RTP1YMR185W YJR115WP47152 169 aa2.66□□□□□ -1.98
RTP1YMR185W NIS1P53939 407 aa2.66□□□□□ -1.98
RTP1YMR185W IXR1P33417 597 aa2.65□□□□□ -1.98
RTP1YMR185W DSF2P38213 736 aa2.65□□□□□ -1.98
RTP1YMR185W ALR1Q08269 859 aa2.65□□□□□ -1.98
RTP1YMR185W YDL206WQ12424 762 aa2.65□□□□□ -1.98
RTP1YMR185W AGE1Q04412 482 aa2.65□□□□□ -1.99
RTP1YMR185W NUP170P38181 1502 aa2.65□□□□□ -1.99
RTP1YMR185W DIT2P21595 489 aa2.65□□□□□ -1.99
RTP1YMR185W RRD1P40454 393 aaKnown RBP2.64□□□□□ -1.99
RTP1YMR185W HXT10P43581 546 aa2.64□□□□□ -1.99
RTP1YMR185W FPK1P53739 893 aa2.64□□□□□ -1.99
RTP1YMR185W LCB5Q06147 687 aaKnown RBP2.64□□□□□ -1.99
RTP1YMR185W TYW1Q08960 810 aaKnown RBP2.64□□□□□ -1.99
RTP1YMR185W ECM5Q03214 1411 aa2.64□□□□□ -1.99
RTP1YMR185W PDC1P06169 563 aaKnown RBP2.64□□□□□ -1.99
RTP1YMR185W MOD5P07884 428 aa2.64□□□□□ -1.99
RTP1YMR185W YTA7P40340 1379 aa2.64□□□□□ -1.99
RTP1YMR185W YLR346CQ06139 101 aa2.63□□□□□ -1.99
RTP1YMR185W MYO4P32492 1471 aa2.63□□□□□ -1.99
RTP1YMR185W YPK9Q12697 1472 aa2.63□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms