RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W ESL2P36168 1195 aa10.72□□□□□ -0.69
NUP53YMR153W RCM1P53972 490 aa10.69□□□□□ -0.7
NUP53YMR153W ENV9Q08651 330 aa10.69□□□□□ -0.7
NUP53YMR153W CPS1P27614 576 aa10.67□□□□□ -0.7
NUP53YMR153W IMH1Q06704 911 aaKnown RBP10.67□□□□□ -0.7
NUP53YMR153W PRP45P28004 379 aaPredicted RBP10.66□□□□□ -0.7
NUP53YMR153W YMR074CQ04773 145 aa10.64□□□□□ -0.71
NUP53YMR153W PPH3P32345 308 aa10.62□□□□□ -0.71
NUP53YMR153W PRI1P10363 409 aa10.58□□□□□ -0.72
NUP53YMR153W URB1P34241 1764 aaKnown RBP10.58□□□□□ -0.72
NUP53YMR153W KIP3P53086 805 aaKnown RBP10.58□□□□□ -0.72
NUP53YMR153W SPE2P21182 396 aa10.57□□□□□ -0.72
NUP53YMR153W PRP5P21372 849 aaPredicted RBP10.57□□□□□ -0.72
NUP53YMR153W PSK1P31374 1356 aa10.55□□□□□ -0.72
NUP53YMR153W FKS3Q04952 1785 aa10.55□□□□□ -0.72
NUP53YMR153W LEU3P08638 886 aa10.54□□□□□ -0.72
NUP53YMR153W ADE6P38972 1358 aaKnown RBP10.54□□□□□ -0.72
NUP53YMR153W BUD31P25337 157 aaPredicted RBP10.52□□□□□ -0.73
NUP53YMR153W MSB3P48566 633 aaPredicted RBP10.51□□□□□ -0.73
NUP53YMR153W ORC1P54784 914 aaPredicted RBP10.51□□□□□ -0.73
NUP53YMR153W YLR419WQ06698 1435 aaKnown RBP10.48□□□□□ -0.73
NUP53YMR153W CSE4P36012 229 aa10.48□□□□□ -0.73
NUP53YMR153W YIL177CP40434 1758 aa10.48□□□□□ -0.73
NUP53YMR153W YJL225CP40889 1758 aa10.48□□□□□ -0.73
NUP53YMR153W CHZ1P40019 153 aaPredicted RBP10.47□□□□□ -0.73
NUP53YMR153W TCB1Q12466 1186 aa10.46□□□□□ -0.74
NUP53YMR153W YRF1-3P0CX14 1859 aa10.46□□□□□ -0.74
NUP53YMR153W YRF1-7P0CX15 1859 aa10.46□□□□□ -0.74
NUP53YMR153W YRF1-6P53819 1859 aa10.46□□□□□ -0.74
NUP53YMR153W LEU2P04173 364 aaPredicted RBP10.45□□□□□ -0.74
NUP53YMR153W UBP1P25037 809 aa10.45□□□□□ -0.74
NUP53YMR153W IES2P40154 320 aa10.45□□□□□ -0.74
NUP53YMR153W RPS24AP0CX31 135 aaKnown RBP10.44□□□□□ -0.74
NUP53YMR153W RPS24BP0CX32 135 aaKnown RBP10.44□□□□□ -0.74
NUP53YMR153W MTR4P47047 1073 aaKnown RBP10.44□□□□□ -0.74
NUP53YMR153W RSF2P46974 1380 aa10.44□□□□□ -0.74
NUP53YMR153W MLP1Q02455 1875 aaKnown RBP10.43□□□□□ -0.74
NUP53YMR153W RPN11P43588 306 aaKnown RBP10.42□□□□□ -0.74
NUP53YMR153W SLM3Q12093 417 aa10.42□□□□□ -0.74
NUP53YMR153W DOT5P40553 215 aa10.41□□□□□ -0.74
NUP53YMR153W ROM2P51862 1356 aaKnown RBP10.41□□□□□ -0.74
NUP53YMR153W APC1P53886 1748 aa10.41□□□□□ -0.74
NUP53YMR153W PRP43P53131 767 aaKnown RBP10.4□□□□□ -0.75
NUP53YMR153W ENP1P38333 483 aaKnown RBP10.39□□□□□ -0.75
NUP53YMR153W SCT1P32784 759 aa10.38□□□□□ -0.75
NUP53YMR153W YJL181WP46987 611 aa10.37□□□□□ -0.75
NUP53YMR153W FOX2Q02207 900 aaKnown RBP10.37□□□□□ -0.75
NUP53YMR153W YML133CQ03099 1374 aa10.36□□□□□ -0.75
NUP53YMR153W YLL067CQ07888 1374 aa10.36□□□□□ -0.75
NUP53YMR153W YLL066CQ99208 1374 aa10.36□□□□□ -0.75
NUP53YMR153W XKS1P42826 600 aa10.35□□□□□ -0.75
NUP53YMR153W EDE1P34216 1381 aa10.35□□□□□ -0.75
NUP53YMR153W YKL133CP36066 463 aa10.33□□□□□ -0.76
NUP53YMR153W PRP40P33203 583 aaKnown RBP10.33□□□□□ -0.76
NUP53YMR153W YBL086CP38177 466 aa10.33□□□□□ -0.76
NUP53YMR153W LAM6Q08001 693 aa10.33□□□□□ -0.76
NUP53YMR153W SNF2P22082 1703 aa10.31□□□□□ -0.76
NUP53YMR153W DPS1P04802 557 aaKnown RBP10.31□□□□□ -0.76
NUP53YMR153W YEF3P16521 1044 aaKnown RBP10.31□□□□□ -0.76
NUP53YMR153W NPR2P39923 615 aa10.31□□□□□ -0.76
NUP53YMR153W YRF1-4O13559 1382 aa10.3□□□□□ -0.76
NUP53YMR153W LYS4P49367 693 aaPredicted RBP10.3□□□□□ -0.76
NUP53YMR153W GAS4Q08271 471 aa10.3□□□□□ -0.76
NUP53YMR153W COBP00163 385 aa10.29□□□□□ -0.76
NUP53YMR153W UGA2P38067 497 aa10.28□□□□□ -0.76
NUP53YMR153W RTF1P53064 558 aa10.28□□□□□ -0.76
NUP53YMR153W RIM15P43565 1770 aa10.28□□□□□ -0.76
NUP53YMR153W PDI1P17967 522 aaKnown RBP10.27□□□□□ -0.77
NUP53YMR153W FKH1P40466 484 aa10.27□□□□□ -0.77
NUP53YMR153W ALD2P47771 506 aa10.26□□□□□ -0.77
NUP53YMR153W RTG3P38165 486 aa10.25□□□□□ -0.77
NUP53YMR153W SSA2P10592 639 aaKnown RBP10.24□□□□□ -0.77
NUP53YMR153W YKR075CP36155 307 aa10.24□□□□□ -0.77
NUP53YMR153W GTT3P39996 337 aa10.24□□□□□ -0.77
NUP53YMR153W FRK1Q03002 865 aaPredicted RBP10.24□□□□□ -0.77
NUP53YMR153W MEC3Q02574 474 aa10.23□□□□□ -0.77
NUP53YMR153W SIR4P11978 1358 aa10.21□□□□□ -0.77
NUP53YMR153W RCR1P38212 213 aa10.21□□□□□ -0.78
NUP53YMR153W CTH1P47976 325 aa10.2□□□□□ -0.78
NUP53YMR153W AUS1Q08409 1394 aa10.2□□□□□ -0.78
NUP53YMR153W ADE16P54113 591 aaKnown RBP10.19□□□□□ -0.78
NUP53YMR153W SEC3P33332 1336 aaKnown RBP10.19□□□□□ -0.78
NUP53YMR153W GRX4P32642 244 aa10.18□□□□□ -0.78
NUP53YMR153W TAP42Q04372 366 aa10.17□□□□□ -0.78
NUP53YMR153W HIM1Q06674 414 aa10.16□□□□□ -0.78
NUP53YMR153W MHP1P43638 1398 aa10.16□□□□□ -0.78
NUP53YMR153W ATG13Q06628 738 aa10.16□□□□□ -0.78
NUP53YMR153W POL5P39985 1022 aaKnown RBP10.15□□□□□ -0.79
NUP53YMR153W PDS5Q04264 1277 aa10.15□□□□□ -0.79
NUP53YMR153W RPO41P13433 1351 aaKnown RBP10.14□□□□□ -0.79
NUP53YMR153W KAR2P16474 682 aaKnown RBP10.13□□□□□ -0.79
NUP53YMR153W SPT7P35177 1332 aa10.13□□□□□ -0.79
NUP53YMR153W BDF1P35817 686 aa10.12□□□□□ -0.79
NUP53YMR153W MSB4Q12317 492 aa10.11□□□□□ -0.79
NUP53YMR153W ALD3P54114 506 aa10.1□□□□□ -0.79
NUP53YMR153W RPG1P38249 964 aaKnown RBP10.09□□□□□ -0.79
NUP53YMR153W BUB1P41695 1021 aaKnown RBP RIP-Chip data10.09□□□□□ -0.79not detected
NUP53YMR153W SSA1P10591 642 aaKnown RBP10.08□□□□□ -0.8
NUP53YMR153W INP54Q08227 384 aaKnown RBP10.08□□□□□ -0.8
NUP53YMR153W BUG1Q12191 341 aa10.07□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms