RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C SUB2Q07478 446 aaKnown RBP7.28□□□□□ -1.24
VPS71YML041C TFB4Q12004 338 aa7.28□□□□□ -1.24
VPS71YML041C ISU2Q12056 156 aa7.26□□□□□ -1.25
VPS71YML041C SCJ1P25303 377 aa7.24□□□□□ -1.25
VPS71YML041C RGA2Q06407 1009 aa7.24□□□□□ -1.25
VPS71YML041C MMP1Q12372 583 aa7.24□□□□□ -1.25
VPS71YML041C TIF1P10081 395 aaKnown RBP7.23□□□□□ -1.25
VPS71YML041C CSE4P36012 229 aa7.23□□□□□ -1.25
VPS71YML041C YML082WQ04533 649 aaKnown RBP7.23□□□□□ -1.25
VPS71YML041C RPP1BP10622 106 aaKnown RBP7.22□□□□□ -1.25
VPS71YML041C BIO2P32451 375 aa7.22□□□□□ -1.25
VPS71YML041C RSC30P38781 883 aa7.22□□□□□ -1.25
VPS71YML041C PTC2P39966 464 aaKnown RBP7.22□□□□□ -1.25
VPS71YML041C RAD59Q12223 238 aa7.22□□□□□ -1.25
VPS71YML041C ESS1P22696 170 aa7.21□□□□□ -1.26
VPS71YML041C YBL036CP38197 257 aa7.21□□□□□ -1.26
VPS71YML041C XDJ1P39102 459 aa7.21□□□□□ -1.26
VPS71YML041C ERG12P07277 443 aa7.2□□□□□ -1.26
VPS71YML041C SUP45P12385 437 aaKnown RBP7.2□□□□□ -1.26
VPS71YML041C YJU3P28321 313 aa7.2□□□□□ -1.26
VPS71YML041C SSA1P10591 642 aaKnown RBP7.19□□□□□ -1.26
VPS71YML041C NOP8Q08287 484 aaPredicted RBP7.19□□□□□ -1.26
VPS71YML041C RAM1P22007 431 aa7.18□□□□□ -1.26
VPS71YML041C TTI1P36097 1038 aa7.18□□□□□ -1.26
VPS71YML041C GEF1P37020 779 aa7.18□□□□□ -1.26
VPS71YML041C PKH3Q03306 898 aaPredicted RBP7.18□□□□□ -1.26
VPS71YML041C YMR196WQ04336 1088 aa7.18□□□□□ -1.26
VPS71YML041C YPR015CQ12531 247 aa7.18□□□□□ -1.26
VPS71YML041C PDR1P12383 1068 aa7.17□□□□□ -1.26
VPS71YML041C TUM1Q08686 304 aaKnown RBP7.17□□□□□ -1.26
VPS71YML041C PEX21P50091 288 aa7.15□□□□□ -1.26
VPS71YML041C RTF1P53064 558 aa7.15□□□□□ -1.26
VPS71YML041C YML020WQ03722 664 aa7.15□□□□□ -1.26
VPS71YML041C SSA4P22202 642 aaKnown RBP7.14□□□□□ -1.27
VPS71YML041C YNL108CP53929 270 aa7.14□□□□□ -1.27
VPS71YML041C YRR1Q12172 810 aa7.14□□□□□ -1.27
VPS71YML041C RPL34BP40525 121 aaKnown RBP7.13□□□□□ -1.27
VPS71YML041C YNL115CP53925 644 aa7.13□□□□□ -1.27
VPS71YML041C MRX10Q05648 414 aa7.13□□□□□ -1.27
VPS71YML041C MAK16P10962 306 aaPredicted RBP7.12□□□□□ -1.27
VPS71YML041C SPT5P27692 1063 aaKnown RBP7.12□□□□□ -1.27
VPS71YML041C RTG2P32608 588 aaKnown RBP7.12□□□□□ -1.27
VPS71YML041C LAM6Q08001 693 aa7.12□□□□□ -1.27
VPS71YML041C NOB1Q08444 459 aaKnown RBP7.12□□□□□ -1.27
VPS71YML041C ARG8P18544 423 aa7.11□□□□□ -1.27
VPS71YML041C CPS1P27614 576 aa7.11□□□□□ -1.27
VPS71YML041C SLX8P40072 274 aa7.11□□□□□ -1.27
VPS71YML041C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
VPS71YML041C YPR204WQ08995 1032 aa7.11□□□□□ -1.27
VPS71YML041C ENO2P00925 437 aaKnown RBP7.1□□□□□ -1.27
VPS71YML041C YDJ1P25491 409 aaKnown RBP7.1□□□□□ -1.27
VPS71YML041C SLY41P22215 453 aa7.09□□□□□ -1.27
VPS71YML041C ERF2Q06551 359 aa7.08□□□□□ -1.28
VPS71YML041C ENO1P00924 437 aaKnown RBP7.07□□□□□ -1.28
VPS71YML041C RIM21P48565 533 aa7.07□□□□□ -1.28
VPS71YML041C PUP1P25043 261 aa7.06□□□□□ -1.28
VPS71YML041C TRM1P15565 570 aaKnown RBP7.05□□□□□ -1.28
VPS71YML041C NUD1P32336 851 aa7.05□□□□□ -1.28
VPS71YML041C PEP12P32854 288 aa7.05□□□□□ -1.28
VPS71YML041C STR2P47164 639 aa7.05□□□□□ -1.28
VPS71YML041C PUS6P53294 404 aa7.05□□□□□ -1.28
VPS71YML041C ISM1P48526 1002 aa7.04□□□□□ -1.28
VPS71YML041C NAF1P53919 492 aaKnown RBP7.04□□□□□ -1.28
VPS71YML041C BUD20Q08004 166 aaPredicted RBP7.04□□□□□ -1.28
VPS71YML041C DPS1P04802 557 aaKnown RBP7.03□□□□□ -1.28
VPS71YML041C KEX2P13134 814 aa7.03□□□□□ -1.28
VPS71YML041C SIS2P36024 562 aa7.03□□□□□ -1.28
VPS71YML041C RDS2P19541 446 aaKnown RBP7.02□□□□□ -1.29
VPS71YML041C AGE1Q04412 482 aa7.02□□□□□ -1.29
VPS71YML041C GYP1Q08484 637 aa7.02□□□□□ -1.29
VPS71YML041C YML083CQ04526 418 aa7.01□□□□□ -1.29
VPS71YML041C PRT1P06103 763 aaKnown RBP6.99□□□□□ -1.29
VPS71YML041C TGL4P36165 910 aa6.99□□□□□ -1.29
VPS71YML041C TY1A-DR4O74302 440 aa6.98□□□□□ -1.29
VPS71YML041C TY1A-HP0C2I4 478 aaKnown RBP6.98□□□□□ -1.29
VPS71YML041C TY1A-AP0CX57 440 aa6.98□□□□□ -1.29
VPS71YML041C TY1A-PR1P0CX58 440 aa6.98□□□□□ -1.29
VPS71YML041C TY1A-ORP0CX59 440 aa6.98□□□□□ -1.29
VPS71YML041C TY1A-PR2P0CX60 440 aa6.98□□□□□ -1.29
VPS71YML041C TY1A-DR5P0CX65 440 aa6.98□□□□□ -1.29
VPS71YML041C TY1A-ER2P0CX66 440 aa6.98□□□□□ -1.29
VPS71YML041C TY1A-GR3P0CX67 440 aa6.98□□□□□ -1.29
VPS71YML041C TY1A-LR1P0CX68 440 aa6.98□□□□□ -1.29
VPS71YML041C TY1A-MR2P0CX69 440 aa6.98□□□□□ -1.29
VPS71YML041C SEC2P17065 759 aa6.98□□□□□ -1.29
VPS71YML041C CDC3P32457 520 aaKnown RBP6.98□□□□□ -1.29
VPS71YML041C NPL4P33755 580 aa6.98□□□□□ -1.29
VPS71YML041C YPP1P46951 817 aa6.98□□□□□ -1.29
VPS71YML041C TY1A-JR2P47099 440 aa6.98□□□□□ -1.29
VPS71YML041C TY1A-DR1Q03856 440 aa6.98□□□□□ -1.29
VPS71YML041C SAS4Q04003 481 aa6.98□□□□□ -1.29
VPS71YML041C TY1A-ML1Q04706 440 aaKnown RBP6.98□□□□□ -1.29
VPS71YML041C TY1A-BRQ12217 440 aa6.98□□□□□ -1.29
VPS71YML041C TY1A-NL2Q12470 440 aa6.98□□□□□ -1.29
VPS71YML041C TY1A-GR2Q12485 440 aa6.98□□□□□ -1.29
VPS71YML041C SDH2P21801 266 aa6.97□□□□□ -1.29
VPS71YML041C MCM16Q12262 181 aa6.97□□□□□ -1.29
VPS71YML041C GCD11P32481 527 aaKnown RBP6.95□□□□□ -1.3
VPS71YML041C TUB4P53378 473 aa6.95□□□□□ -1.3
VPS71YML041C RAS1P01119 309 aa6.94□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms