RNA–Protein interactions for RNA: YLR442C

SIR3, Transcript of Silencing protein, yeastyeast

Gene SIR3, Length 2,937 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR3YLR442C TY1A-BRQ12217 440 aa3.99□□□□□ -1.77
SIR3YLR442C TY1A-NL2Q12470 440 aa3.99□□□□□ -1.77
SIR3YLR442C TY1A-GR2Q12485 440 aa3.99□□□□□ -1.77
SIR3YLR442C ORC6P38826 435 aa3.99□□□□□ -1.77
SIR3YLR442C SEC2P17065 759 aa3.98□□□□□ -1.77
SIR3YLR442C TUM1Q08686 304 aaKnown RBP3.98□□□□□ -1.77
SIR3YLR442C YPR148CQ06523 435 aa3.98□□□□□ -1.77
SIR3YLR442C CDC4P07834 779 aa3.96□□□□□ -1.78
SIR3YLR442C NPL4P33755 580 aa3.96□□□□□ -1.78
SIR3YLR442C SPT16P32558 1035 aaKnown RBP3.96□□□□□ -1.78
SIR3YLR442C REF2P42073 533 aaPredicted RBP3.96□□□□□ -1.78
SIR3YLR442C GAR1P28007 205 aaKnown RBP3.95□□□□□ -1.78
SIR3YLR442C GCD11P32481 527 aaKnown RBP3.94□□□□□ -1.78
SIR3YLR442C MVP1P40959 511 aaKnown RBP3.94□□□□□ -1.78
SIR3YLR442C ENV9Q08651 330 aa3.94□□□□□ -1.78
SIR3YLR442C BDP1P46678 594 aa3.93□□□□□ -1.78
SIR3YLR442C MET22P32179 357 aa3.93□□□□□ -1.78
SIR3YLR442C FRK1Q03002 865 aaPredicted RBP3.92□□□□□ -1.78
SIR3YLR442C HED1Q03937 162 aa3.92□□□□□ -1.78
SIR3YLR442C GBP2P25555 427 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
SIR3YLR442C MAK21Q12176 1025 aaKnown RBP3.92□□□□□ -1.78
SIR3YLR442C COX6P00427 148 aa3.91□□□□□ -1.78
SIR3YLR442C RRN7P40992 514 aa3.91□□□□□ -1.78
SIR3YLR442C RGR1P19263 1082 aa3.9□□□□□ -1.78
SIR3YLR442C PAT1P25644 796 aaKnown RBP3.9□□□□□ -1.79
SIR3YLR442C YPR109WQ06104 294 aa3.88□□□□□ -1.79
SIR3YLR442C MOD5P07884 428 aa3.88□□□□□ -1.79
SIR3YLR442C YDR444WQ04093 687 aa3.88□□□□□ -1.79
SIR3YLR442C YDL176WQ12027 708 aa3.87□□□□□ -1.79
SIR3YLR442C LCB5Q06147 687 aaKnown RBP3.87□□□□□ -1.79
SIR3YLR442C MET32Q12041 191 aa3.86□□□□□ -1.79
SIR3YLR442C AFT1P22149 690 aa3.86□□□□□ -1.79
SIR3YLR442C ERF2Q06551 359 aa3.85□□□□□ -1.79
SIR3YLR442C KEX2P13134 814 aa3.85□□□□□ -1.79
SIR3YLR442C ASH1P34233 588 aa3.84□□□□□ -1.79
SIR3YLR442C PAC1P39946 494 aaKnown RBP3.84□□□□□ -1.79
SIR3YLR442C AGE1Q04412 482 aa3.84□□□□□ -1.79
SIR3YLR442C VPS70P47161 811 aa3.84□□□□□ -1.8
SIR3YLR442C RRD1P40454 393 aaKnown RBP3.82□□□□□ -1.8
SIR3YLR442C PSE1P32337 1089 aaKnown RBP3.81□□□□□ -1.8
SIR3YLR442C HST3P53687 447 aa3.81□□□□□ -1.8
SIR3YLR442C RTF1P53064 558 aa3.81□□□□□ -1.8
SIR3YLR442C TUB4P53378 473 aa3.8□□□□□ -1.8
SIR3YLR442C CLB5P30283 435 aa3.79□□□□□ -1.8
SIR3YLR442C TPD3P31383 635 aa3.79□□□□□ -1.8
SIR3YLR442C YJR115WP47152 169 aa3.79□□□□□ -1.8
SIR3YLR442C PUS5Q06244 254 aa3.79□□□□□ -1.8
SIR3YLR442C MSB3P48566 633 aaPredicted RBP3.78□□□□□ -1.8
SIR3YLR442C YNL115CP53925 644 aa3.76□□□□□ -1.81
SIR3YLR442C SIT4P20604 311 aa3.76□□□□□ -1.81
SIR3YLR442C ACO2P39533 789 aa3.76□□□□□ -1.81
SIR3YLR442C PBS2P08018 668 aa3.74□□□□□ -1.81
SIR3YLR442C CKB1P43639 278 aa3.74□□□□□ -1.81
SIR3YLR442C HXT10P43581 546 aa3.73□□□□□ -1.81
SIR3YLR442C SYH1Q02875 849 aaKnown RBP3.73□□□□□ -1.81
SIR3YLR442C KXD1P53158 218 aa3.73□□□□□ -1.81
SIR3YLR442C MTC5Q03897 1148 aa3.72□□□□□ -1.81
SIR3YLR442C CAF120P53836 1060 aa3.72□□□□□ -1.81
SIR3YLR442C PDC1P06169 563 aaKnown RBP3.71□□□□□ -1.81
SIR3YLR442C OPT2Q06593 877 aa3.71□□□□□ -1.82
SIR3YLR442C PTK2P47116 818 aaKnown RBP3.71□□□□□ -1.82
SIR3YLR442C MAM3Q12296 706 aa3.7□□□□□ -1.82
SIR3YLR442C GLY1P37303 387 aaKnown RBP3.7□□□□□ -1.82
SIR3YLR442C RTT106P40161 455 aa3.7□□□□□ -1.82
SIR3YLR442C MRT4P33201 236 aaKnown RBP3.69□□□□□ -1.82
SIR3YLR442C NIS1P53939 407 aa3.69□□□□□ -1.82
SIR3YLR442C UGA3P26370 528 aa3.69□□□□□ -1.82
SIR3YLR442C TRK2P28584 889 aa3.69□□□□□ -1.82
SIR3YLR442C YLR346CQ06139 101 aa3.69□□□□□ -1.82
SIR3YLR442C DSF2P38213 736 aa3.68□□□□□ -1.82
SIR3YLR442C TEA1P47988 759 aa3.68□□□□□ -1.82
SIR3YLR442C NUP85P46673 744 aa3.67□□□□□ -1.82
SIR3YLR442C RPA14P50106 137 aa3.67□□□□□ -1.82
SIR3YLR442C URN1Q06525 465 aaKnown RBP3.67□□□□□ -1.82
SIR3YLR442C NUP42P49686 430 aaKnown RBP3.67□□□□□ -1.82
SIR3YLR442C YGR035CP53222 116 aa3.67□□□□□ -1.82
SIR3YLR442C YIR007WP40566 764 aa3.66□□□□□ -1.82
SIR3YLR442C YPR097WQ06839 1073 aa3.66□□□□□ -1.82
SIR3YLR442C TY1A-BLQ12266 440 aa3.66□□□□□ -1.82
SIR3YLR442C IES2P40154 320 aa3.66□□□□□ -1.82
SIR3YLR442C ALR1Q08269 859 aa3.66□□□□□ -1.82
SIR3YLR442C SRF1Q12516 437 aa3.66□□□□□ -1.82
SIR3YLR442C SCW11P53189 542 aa3.65□□□□□ -1.83
SIR3YLR442C HPF1Q05164 967 aa3.65□□□□□ -1.83
SIR3YLR442C SLY41P22215 453 aa3.64□□□□□ -1.83
SIR3YLR442C FPK1P53739 893 aa3.64□□□□□ -1.83
SIR3YLR442C KIP2P28743 706 aa3.64□□□□□ -1.83
SIR3YLR442C PUS6P53294 404 aa3.64□□□□□ -1.83
SIR3YLR442C TYW1Q08960 810 aaKnown RBP3.64□□□□□ -1.83
SIR3YLR442C IXR1P33417 597 aa3.64□□□□□ -1.83
SIR3YLR442C YDL206WQ12424 762 aa3.64□□□□□ -1.83
SIR3YLR442C MIP1P15801 1254 aa3.63□□□□□ -1.83
SIR3YLR442C BUB1P41695 1021 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
SIR3YLR442C TBF1Q02457 562 aa3.61□□□□□ -1.83
SIR3YLR442C SAS10Q12136 610 aaPredicted RBP3.61□□□□□ -1.83
SIR3YLR442C HST2P53686 357 aa3.6□□□□□ -1.83
SIR3YLR442C AIM44Q99299 758 aa3.6□□□□□ -1.83
SIR3YLR442C TRM1P15565 570 aaKnown RBP3.6□□□□□ -1.83
SIR3YLR442C AAD14P42884 376 aa3.6□□□□□ -1.83
SIR3YLR442C YMR196WQ04336 1088 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms