RNA–Protein interactions for RNA: YLR353W

BUD8, Transcript of Protein involved in bud-site selection, yeastyeast

Gene BUD8, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD8YLR353W SSA1P10591 642 aaKnown RBP7.59□□□□□ -1.19
BUD8YLR353W DIT2P21595 489 aa7.58□□□□□ -1.2
BUD8YLR353W NSR1P27476 414 aaKnown RBP RIP-Chip data7.57□□□□□ -1.2not detected
BUD8YLR353W GDB1Q06625 1536 aa7.57□□□□□ -1.2
BUD8YLR353W COX6P00427 148 aa7.57□□□□□ -1.2
BUD8YLR353W TOP2P06786 1428 aaKnown RBP7.55□□□□□ -1.2
BUD8YLR353W HGH1P48362 394 aaKnown RBP7.53□□□□□ -1.2
BUD8YLR353W CHC1P22137 1653 aaKnown RBP7.52□□□□□ -1.21
BUD8YLR353W TIF4632P39936 914 aaKnown RBP7.51□□□□□ -1.21
BUD8YLR353W YAP5P40574 245 aa7.51□□□□□ -1.21
BUD8YLR353W VMA1P17255 1071 aaKnown RBP7.49□□□□□ -1.21
BUD8YLR353W BNR1P40450 1375 aa7.48□□□□□ -1.21
BUD8YLR353W SNT2P53127 1403 aa7.48□□□□□ -1.21
BUD8YLR353W ATF2P53296 535 aa7.48□□□□□ -1.21
BUD8YLR353W MAK10Q02197 733 aa7.48□□□□□ -1.21
BUD8YLR353W GUA1P38625 525 aaKnown RBP7.48□□□□□ -1.21
BUD8YLR353W YDR090CQ03193 310 aa7.47□□□□□ -1.21
BUD8YLR353W PIB1Q06651 286 aa7.47□□□□□ -1.21
BUD8YLR353W MLP2P40457 1679 aa7.47□□□□□ -1.21
BUD8YLR353W UBP14P38237 781 aaKnown RBP7.46□□□□□ -1.21
BUD8YLR353W VHR2P40041 505 aa7.46□□□□□ -1.21
BUD8YLR353W TGL3P40308 642 aa7.46□□□□□ -1.21
BUD8YLR353W GUT1P32190 709 aa7.45□□□□□ -1.22
BUD8YLR353W ATH1P48016 1211 aa7.45□□□□□ -1.22
BUD8YLR353W YMR074CQ04773 145 aa7.45□□□□□ -1.22
BUD8YLR353W GRE2Q12068 342 aaKnown RBP7.45□□□□□ -1.22
BUD8YLR353W VTH1P40438 1549 aa7.45□□□□□ -1.22
BUD8YLR353W VTH2P40890 1549 aa7.45□□□□□ -1.22
BUD8YLR353W HPC2Q01448 625 aa7.44□□□□□ -1.22
BUD8YLR353W YLR326WQ06170 240 aaKnown RBP7.43□□□□□ -1.22
BUD8YLR353W BUD3P25558 1636 aa7.43□□□□□ -1.22
BUD8YLR353W IQG1Q12280 1495 aa7.42□□□□□ -1.22
BUD8YLR353W SAM3Q08986 587 aa7.41□□□□□ -1.22
BUD8YLR353W THI12P42883 340 aa7.41□□□□□ -1.22
BUD8YLR353W THI5P43534 340 aa7.41□□□□□ -1.22
BUD8YLR353W THI11P47183 340 aa7.41□□□□□ -1.22
BUD8YLR353W THI13Q07748 340 aa7.41□□□□□ -1.22
BUD8YLR353W YGR273CP53329 174 aa7.4□□□□□ -1.23
BUD8YLR353W MYO4P32492 1471 aa7.4□□□□□ -1.23
BUD8YLR353W TSC11P40061 1430 aa7.39□□□□□ -1.23
BUD8YLR353W TY3B-GQ99315 1547 aa7.39□□□□□ -1.23
BUD8YLR353W KIC1P38692 1080 aa7.39□□□□□ -1.23
BUD8YLR353W YSP2Q06681 1438 aa7.38□□□□□ -1.23
BUD8YLR353W PSE1P32337 1089 aaKnown RBP7.38□□□□□ -1.23
BUD8YLR353W MET10P39692 1035 aa7.36□□□□□ -1.23
BUD8YLR353W TY1B-NL2Q99337 1749 aaKnown RBP7.36□□□□□ -1.23
BUD8YLR353W KEX1P09620 729 aa7.36□□□□□ -1.23
BUD8YLR353W RAD54P32863 898 aa7.36□□□□□ -1.23
BUD8YLR353W APP1P53933 587 aa7.36□□□□□ -1.23
BUD8YLR353W TFB3Q03290 321 aa7.36□□□□□ -1.23
BUD8YLR353W PCS60P38137 543 aaKnown RBP RIP-Chip data7.34□□□□□ -1.23not detected
BUD8YLR353W SOL3P38858 249 aa7.34□□□□□ -1.23
BUD8YLR353W GYP5Q12344 894 aa7.34□□□□□ -1.23
BUD8YLR353W YAP3P38749 330 aa7.34□□□□□ -1.24
BUD8YLR353W SSA2P10592 639 aaKnown RBP7.33□□□□□ -1.24
BUD8YLR353W BRL1P38770 471 aa7.33□□□□□ -1.24
BUD8YLR353W YMR196WQ04336 1088 aa7.33□□□□□ -1.24
BUD8YLR353W MST1P07236 462 aa7.32□□□□□ -1.24
BUD8YLR353W PDR12Q02785 1511 aa7.32□□□□□ -1.24
BUD8YLR353W BUD31P25337 157 aaPredicted RBP7.3□□□□□ -1.24
BUD8YLR353W ORC6P38826 435 aa7.3□□□□□ -1.24
BUD8YLR353W STU1P38198 1513 aa7.3□□□□□ -1.24
BUD8YLR353W CSN12P47130 423 aa7.29□□□□□ -1.24
BUD8YLR353W NST1P53935 1240 aa7.29□□□□□ -1.24
BUD8YLR353W YBT1P32386 1661 aa7.29□□□□□ -1.24
BUD8YLR353W HAP1P0CE41 1502 aa7.28□□□□□ -1.24
BUD8YLR353W GTT3P39996 337 aa7.27□□□□□ -1.25
BUD8YLR353W PKC1P24583 1151 aa7.27□□□□□ -1.25
BUD8YLR353W TEA1P47988 759 aa7.26□□□□□ -1.25
BUD8YLR353W DCW1P36091 449 aa7.25□□□□□ -1.25
BUD8YLR353W YTA7P40340 1379 aa7.25□□□□□ -1.25
BUD8YLR353W SSN2P38931 1420 aa7.24□□□□□ -1.25
BUD8YLR353W YOL036WQ08206 761 aa7.24□□□□□ -1.25
BUD8YLR353W SNQ2P32568 1501 aaKnown RBP7.24□□□□□ -1.25
BUD8YLR353W AI4P03878 556 aa7.23□□□□□ -1.25
BUD8YLR353W MPH3P0CE00 602 aa7.23□□□□□ -1.25
BUD8YLR353W YOR1P53049 1477 aa7.23□□□□□ -1.25
BUD8YLR353W SMC4Q12267 1418 aa7.23□□□□□ -1.25
BUD8YLR353W RGR1P19263 1082 aa7.22□□□□□ -1.25
BUD8YLR353W CLB5P30283 435 aa7.22□□□□□ -1.25
BUD8YLR353W HTA1P04911 132 aaKnown RBP7.22□□□□□ -1.25
BUD8YLR353W HTA2P04912 132 aa7.22□□□□□ -1.25
BUD8YLR353W KTR1P27810 393 aaKnown RBP7.22□□□□□ -1.25
BUD8YLR353W ILV3P39522 585 aaKnown RBP7.21□□□□□ -1.26
BUD8YLR353W BIM1P40013 344 aa7.2□□□□□ -1.26
BUD8YLR353W SET4P42948 560 aa7.2□□□□□ -1.26
BUD8YLR353W MVP1P40959 511 aaKnown RBP7.2□□□□□ -1.26
BUD8YLR353W GAP1P19145 602 aaPredicted RBP7.19□□□□□ -1.26
BUD8YLR353W YJL007CP47080 104 aa7.19□□□□□ -1.26
BUD8YLR353W ENV9Q08651 330 aa7.19□□□□□ -1.26
BUD8YLR353W BCK1Q01389 1478 aa7.19□□□□□ -1.26
BUD8YLR353W MSB4Q12317 492 aa7.18□□□□□ -1.26
BUD8YLR353W NUP188P52593 1655 aaKnown RBP7.18□□□□□ -1.26
BUD8YLR353W ATG32P40458 529 aa7.17□□□□□ -1.26
BUD8YLR353W CSC1Q06538 782 aa7.17□□□□□ -1.26
BUD8YLR353W TYW1Q08960 810 aaKnown RBP7.17□□□□□ -1.26
BUD8YLR353W RPP1BP10622 106 aaKnown RBP7.15□□□□□ -1.26
BUD8YLR353W HST2P53686 357 aa7.15□□□□□ -1.26
BUD8YLR353W NIS1P53939 407 aa7.15□□□□□ -1.26
BUD8YLR353W SUB2Q07478 446 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms